| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231915
Identifier: 17231915
GI number: 17231915
Start: 5300887
End: 5302026
Strand: Reverse
Name: 17231915
Synonym: all4423
Alternate gene names: NA
Gene position: 5302026-5300887 (Counterclockwise)
Preceding gene: 17231916
Following gene: 17231914
Centisome position: 82.67
GC content: 37.46
Gene sequence:
>1140_bases ATGGGTAAACGCTTACTAATTGTCTCTAACCTTGACTCCAGCCAACCATTTGGCGCTTTTACTAGACCTTTTTACTTAGG ACAAAATCTTACTGAATACTTTCAAGTTTTTCAGTTGGGTCTAGACTGTTCGGCTGTAGACTATGCCCCTTCTCTTTCTA TTGGCTCACGCAGTCTGAAGTCGTACATTCAAAATATTCAAAAGTGTATTGATGAGTTTGAACCAGATGTTGTCTATGCT CAAGAAACGTTACCTGGTTTAGCTGCTCTCATTGCAACAAAGTTAAGGAAAAAGAATAATTTTTCTCTGGTATTAGATTT TCACACTTTTTCACCATATGAATATTGGACACGCTTATTTTCAGTAGCTAATCCTTTTAAAGAATTTACTCAATTAATTA AAACATATATTGCTCAAGGACTATTAGTGTTCTCCGGATGCCCAATAATTGCGGCGGGTGAATCAACACCTTATCTAATT TCCCGGTGGTATGCTAAGAATCCTCAAAAGATTTATTGTATAGGTAATGGAGTAGCTGAATACTTACTGAATAATGAATC TCGTTTGGGTCAAGACCCTTACCAAGCATTGAGACCAGCCAAAATAGTAGTTGTTATTGCTCCTAAAACATTTCAGTTCC CTACTAATGATATGTCCGTATTAATGACTATGGAGGTTGCAAAATCCCTTGAGATTCATCAGCAAAAGATTCATTTTGTT GTCATTGGTAGGGATAGTAGCGATATTGCAGAACCCATTCCCTCTAATATTTCTTTCTTAGGGTTTCTACCTAAACGTGA AGATTTCCTTGACCATCTTCAATATTCAGACATTGCCTTGCTGCCATTTCCTAAGCAAGCAGTAGCGGGTGGCGCTCGCA ATAAAGCCTTAGATTTTTTTGCCAGTAAAAAGTTAGTTGTGTCAACACCAGAAGGCTTACGAGGTTTAGAAGACTTTCGT CACAAGGAGCATCTTTTAATATCTGGATACTCTTGCGAAGATGTGGCTAATACGATTGTGGACGCTACTACAAATATCGA TGAATATCAAGAGCTTGTCCAACAGGCATATTTTTTGATTAGAGAAAAATACTCTTGGAGTGCAAAGGCTAAATATACAG CAGAAATACTGATGAAGTAA
Upstream 100 bases:
>100_bases TCAAATGTAGTTGAATAGGAGACATTACTTTTGGTAAATACTTGAATAAATTTTAAAAAAATACCCACCTTAAATCAGAA ACAATATCTTAAATATTCTT
Downstream 100 bases:
>100_bases ATAGAATCTTAACAATGTTTCCCTCTCTTCACAAAAGATTTAACCAAAAATCTTAGTGTATTTACGTAGGTAAATGATAA TATAGATTTAACGAATTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MGKRLLIVSNLDSSQPFGAFTRPFYLGQNLTEYFQVFQLGLDCSAVDYAPSLSIGSRSLKSYIQNIQKCIDEFEPDVVYA QETLPGLAALIATKLRKKNNFSLVLDFHTFSPYEYWTRLFSVANPFKEFTQLIKTYIAQGLLVFSGCPIIAAGESTPYLI SRWYAKNPQKIYCIGNGVAEYLLNNESRLGQDPYQALRPAKIVVVIAPKTFQFPTNDMSVLMTMEVAKSLEIHQQKIHFV VIGRDSSDIAEPIPSNISFLGFLPKREDFLDHLQYSDIALLPFPKQAVAGGARNKALDFFASKKLVVSTPEGLRGLEDFR HKEHLLISGYSCEDVANTIVDATTNIDEYQELVQQAYFLIREKYSWSAKAKYTAEILMK
Sequences:
>Translated_379_residues MGKRLLIVSNLDSSQPFGAFTRPFYLGQNLTEYFQVFQLGLDCSAVDYAPSLSIGSRSLKSYIQNIQKCIDEFEPDVVYA QETLPGLAALIATKLRKKNNFSLVLDFHTFSPYEYWTRLFSVANPFKEFTQLIKTYIAQGLLVFSGCPIIAAGESTPYLI SRWYAKNPQKIYCIGNGVAEYLLNNESRLGQDPYQALRPAKIVVVIAPKTFQFPTNDMSVLMTMEVAKSLEIHQQKIHFV VIGRDSSDIAEPIPSNISFLGFLPKREDFLDHLQYSDIALLPFPKQAVAGGARNKALDFFASKKLVVSTPEGLRGLEDFR HKEHLLISGYSCEDVANTIVDATTNIDEYQELVQQAYFLIREKYSWSAKAKYTAEILMK >Mature_378_residues GKRLLIVSNLDSSQPFGAFTRPFYLGQNLTEYFQVFQLGLDCSAVDYAPSLSIGSRSLKSYIQNIQKCIDEFEPDVVYAQ ETLPGLAALIATKLRKKNNFSLVLDFHTFSPYEYWTRLFSVANPFKEFTQLIKTYIAQGLLVFSGCPIIAAGESTPYLIS RWYAKNPQKIYCIGNGVAEYLLNNESRLGQDPYQALRPAKIVVVIAPKTFQFPTNDMSVLMTMEVAKSLEIHQQKIHFVV IGRDSSDIAEPIPSNISFLGFLPKREDFLDHLQYSDIALLPFPKQAVAGGARNKALDFFASKKLVVSTPEGLRGLEDFRH KEHLLISGYSCEDVANTIVDATTNIDEYQELVQQAYFLIREKYSWSAKAKYTAEILMK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42803; Mature: 42671
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKRLLIVSNLDSSQPFGAFTRPFYLGQNLTEYFQVFQLGLDCSAVDYAPSLSIGSRSLK CCCEEEEEECCCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH SYIQNIQKCIDEFEPDVVYAQETLPGLAALIATKLRKKNNFSLVLDFHTFSPYEYWTRLF HHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHH SVANPFKEFTQLIKTYIAQGLLVFSGCPIIAAGESTPYLISRWYAKNPQKIYCIGNGVAE HHHHHHHHHHHHHHHHHHCCHHEECCCCEEEECCCCCHHHHHHHCCCCCEEEEECCHHHH YLLNNESRLGQDPYQALRPAKIVVVIAPKTFQFPTNDMSVLMTMEVAKSLEIHQQKIHFV HHHCCCHHCCCCHHHHCCCEEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHEEEEEE VIGRDSSDIAEPIPSNISFLGFLPKREDFLDHLQYSDIALLPFPKQAVAGGARNKALDFF EEECCCHHHHCCCCCCCEEEECCCCHHHHHHHHCCCCEEEECCCHHHHCCCCCHHHHHHH ASKKLVVSTPEGLRGLEDFRHKEHLLISGYSCEDVANTIVDATTNIDEYQELVQQAYFLI HCCCEEEECCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH REKYSWSAKAKYTAEILMK HHCCCCCCCCEEHHHHHCC >Mature Secondary Structure GKRLLIVSNLDSSQPFGAFTRPFYLGQNLTEYFQVFQLGLDCSAVDYAPSLSIGSRSLK CCEEEEEECCCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH SYIQNIQKCIDEFEPDVVYAQETLPGLAALIATKLRKKNNFSLVLDFHTFSPYEYWTRLF HHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHH SVANPFKEFTQLIKTYIAQGLLVFSGCPIIAAGESTPYLISRWYAKNPQKIYCIGNGVAE HHHHHHHHHHHHHHHHHHCCHHEECCCCEEEECCCCCHHHHHHHCCCCCEEEEECCHHHH YLLNNESRLGQDPYQALRPAKIVVVIAPKTFQFPTNDMSVLMTMEVAKSLEIHQQKIHFV HHHCCCHHCCCCHHHHCCCEEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHEEEEEE VIGRDSSDIAEPIPSNISFLGFLPKREDFLDHLQYSDIALLPFPKQAVAGGARNKALDFF EEECCCHHHHCCCCCCCEEEECCCCHHHHHHHHCCCCEEEECCCHHHHCCCCCHHHHHHH ASKKLVVSTPEGLRGLEDFRHKEHLLISGYSCEDVANTIVDATTNIDEYQELVQQAYFLI HCCCEEEECCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH REKYSWSAKAKYTAEILMK HHCCCCCCCCEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA