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The map label for this gene is yhdJ [H]

Identifier: 17231903

GI number: 17231903

Start: 5285817

End: 5286704

Strand: Reverse

Name: yhdJ [H]

Synonym: all4411

Alternate gene names: 17231903

Gene position: 5286704-5285817 (Counterclockwise)

Preceding gene: 17231905

Following gene: 17231902

Centisome position: 82.43

GC content: 34.8

Gene sequence:

>888_bases
ATGTTTGAAACATATGAAGACGAAGCACACATCTTATTTCATGGAGATGCCTTAAATATTTTGTCAAGTAACATTCCAAG
TGAATCTGTAGATCTTATTTTTATAGACCCCCCGTACAACATAGGAAAACATTTCTCTAACTTTCATGATAAATGGGAAT
CTGAGGAAGAATATGCAAACTGGGCTTATAAATGGCTAGATGAGTGCATTCGGGTGCTAAAATCTCACGGAACTATTTAT
GTTATGACCAGTACACAAGCCATGCCATATTTTGATATTTATTTGCGGCAGAAATTAACAATTCTGAGTCGAATAGTATG
GCATTATGATAGTTCTGGAGTTCAAGCAACTAAGTATTTCGGTTCTATGTATGAACCGATACTTCATTGTGTTAAGAACA
AAAGTAATTATATTTTTAATTCAGAAGAAATCAAAATTGAAGCGAAAACTGGCGCACAACGAAAATTAATTGATTATAGA
AAGGCAGTTCCAGCACCATACAATACAGAGAAAGTGCCTGGCAATGTTTGGTATTTTTCTCGTGTGAGATATCGGATGCC
AGAATATGAAAATCATCCTTCACAGAAACCAGAATCATTAATAGAAAGAATTATTTTGTCCAGTAGCAATGAAGATAGTT
TGGTATTAGATCCCTTTGCGGGGACGTTTACAGTTGCTTCTGTAGCAAAGCGTTTAGGGAGAAAATCAATTAGTATAGAG
TCTCAAGAAGAATATTTGAAAATAGGTTTAAGACGTGTATTAGGTTGGGAAGAATATAAGGGAGAACAACTTTCACCACC
AATTAAAACACATATTAGCAGAAATAAAAGTCATCAGAGTTTAGATTCATTACAGCAGAGCCTTTTTAATGCCGATACCA
CAGCATGA

Upstream 100 bases:

>100_bases
TTGAAACAGTTGTTCTAAATTATTTATATTGTTTACTAAAAATAGTATTAATAGCTATAATATTAAACCTGTTTAGTTTT
ATTTATAGATTAATAACATA

Downstream 100 bases:

>100_bases
GTTTACCCAAAATATAGTTGCAATTCTCAATTCTTATTTTCCTAGCTATGGTAATCAAATATTAGAGTATAGTGAGTTAT
TACAGTATTTAAATATTAAA

Product: putative methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MFETYEDEAHILFHGDALNILSSNIPSESVDLIFIDPPYNIGKHFSNFHDKWESEEEYANWAYKWLDECIRVLKSHGTIY
VMTSTQAMPYFDIYLRQKLTILSRIVWHYDSSGVQATKYFGSMYEPILHCVKNKSNYIFNSEEIKIEAKTGAQRKLIDYR
KAVPAPYNTEKVPGNVWYFSRVRYRMPEYENHPSQKPESLIERIILSSSNEDSLVLDPFAGTFTVASVAKRLGRKSISIE
SQEEYLKIGLRRVLGWEEYKGEQLSPPIKTHISRNKSHQSLDSLQQSLFNADTTA

Sequences:

>Translated_295_residues
MFETYEDEAHILFHGDALNILSSNIPSESVDLIFIDPPYNIGKHFSNFHDKWESEEEYANWAYKWLDECIRVLKSHGTIY
VMTSTQAMPYFDIYLRQKLTILSRIVWHYDSSGVQATKYFGSMYEPILHCVKNKSNYIFNSEEIKIEAKTGAQRKLIDYR
KAVPAPYNTEKVPGNVWYFSRVRYRMPEYENHPSQKPESLIERIILSSSNEDSLVLDPFAGTFTVASVAKRLGRKSISIE
SQEEYLKIGLRRVLGWEEYKGEQLSPPIKTHISRNKSHQSLDSLQQSLFNADTTA
>Mature_295_residues
MFETYEDEAHILFHGDALNILSSNIPSESVDLIFIDPPYNIGKHFSNFHDKWESEEEYANWAYKWLDECIRVLKSHGTIY
VMTSTQAMPYFDIYLRQKLTILSRIVWHYDSSGVQATKYFGSMYEPILHCVKNKSNYIFNSEEIKIEAKTGAQRKLIDYR
KAVPAPYNTEKVPGNVWYFSRVRYRMPEYENHPSQKPESLIERIILSSSNEDSLVLDPFAGTFTVASVAKRLGRKSISIE
SQEEYLKIGLRRVLGWEEYKGEQLSPPIKTHISRNKSHQSLDSLQQSLFNADTTA

Specific function: Methylates the second adenine of the NsiI recognition sequence (5'-ATGCAT-3') [H]

COG id: COG0863

COG function: function code L; DNA modification methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI87082238, Length=276, Percent_Identity=55.7971014492754, Blast_Score=311, Evalue=3e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002941
- InterPro:   IPR002052
- InterPro:   IPR001091 [H]

Pfam domain/function: PF01555 N6_N4_Mtase [H]

EC number: =2.1.1.72 [H]

Molecular weight: Translated: 34256; Mature: 34256

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFETYEDEAHILFHGDALNILSSNIPSESVDLIFIDPPYNIGKHFSNFHDKWESEEEYAN
CCCCCCCCEEEEEECCHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCHHHHHH
WAYKWLDECIRVLKSHGTIYVMTSTQAMPYFDIYLRQKLTILSRIVWHYDSSGVQATKYF
HHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
GSMYEPILHCVKNKSNYIFNSEEIKIEAKTGAQRKLIDYRKAVPAPYNTEKVPGNVWYFS
HHHHHHHHHHHHCCCCEEECCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEH
RVRYRMPEYENHPSQKPESLIERIILSSSNEDSLVLDPFAGTFTVASVAKRLGRKSISIE
HHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCC
SQEEYLKIGLRRVLGWEEYKGEQLSPPIKTHISRNKSHQSLDSLQQSLFNADTTA
CHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MFETYEDEAHILFHGDALNILSSNIPSESVDLIFIDPPYNIGKHFSNFHDKWESEEEYAN
CCCCCCCCEEEEEECCHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCHHHHHH
WAYKWLDECIRVLKSHGTIYVMTSTQAMPYFDIYLRQKLTILSRIVWHYDSSGVQATKYF
HHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
GSMYEPILHCVKNKSNYIFNSEEIKIEAKTGAQRKLIDYRKAVPAPYNTEKVPGNVWYFS
HHHHHHHHHHHHCCCCEEECCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEH
RVRYRMPEYENHPSQKPESLIERIILSSSNEDSLVLDPFAGTFTVASVAKRLGRKSISIE
HHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCC
SQEEYLKIGLRRVLGWEEYKGEQLSPPIKTHISRNKSHQSLDSLQQSLFNADTTA
CHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1459953; 2835774 [H]