| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is 17231901
Identifier: 17231901
GI number: 17231901
Start: 5284415
End: 5284585
Strand: Reverse
Name: 17231901
Synonym: asl4409
Alternate gene names: NA
Gene position: 5284585-5284415 (Counterclockwise)
Preceding gene: 17231902
Following gene: 17231900
Centisome position: 82.39
GC content: 47.95
Gene sequence:
>171_bases ATGTCAAACTCGCTCAAAGCATCAACAACTGGACTGACAATTGTAGATAAGGTACGAAAACGTCTTGGGTGGACGAAAAC TAGTACGGCGCGTTGGTGGCAAGATGCTCACACTTCTAGAGCTACTTTACGGCGATTTTGGCAGGGCGATCGCCTACACA TCACTGTGTGA
Upstream 100 bases:
>100_bases TTATATTGACCCATATGGCTAATTTATTGCTCTATTTATCAAGCGCAAATGGAGGTTATATTAAGGCAAAATAGAGACAA TCTACTCAGTTAACAGATAT
Downstream 100 bases:
>100_bases TCGCATTCAGGTTTTAGAATAAAGAGGCGATCGCATAGATTGCCGATATTGAAGGGTGCGTGGCTTGTATTTGGGCGTGT TAGGATCTCCTACAAAATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 56; Mature: 55
Protein sequence:
>56_residues MSNSLKASTTGLTIVDKVRKRLGWTKTSTARWWQDAHTSRATLRRFWQGDRLHITV
Sequences:
>Translated_56_residues MSNSLKASTTGLTIVDKVRKRLGWTKTSTARWWQDAHTSRATLRRFWQGDRLHITV >Mature_55_residues SNSLKASTTGLTIVDKVRKRLGWTKTSTARWWQDAHTSRATLRRFWQGDRLHITV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6528; Mature: 6396
Theoretical pI: Translated: 12.40; Mature: 12.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSLKASTTGLTIVDKVRKRLGWTKTSTARWWQDAHTSRATLRRFWQGDRLHITV CCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHCCCCEEEEEC >Mature Secondary Structure SNSLKASTTGLTIVDKVRKRLGWTKTSTARWWQDAHTSRATLRRFWQGDRLHITV CCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA