| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231899
Identifier: 17231899
GI number: 17231899
Start: 5283693
End: 5284076
Strand: Reverse
Name: 17231899
Synonym: all4407
Alternate gene names: NA
Gene position: 5284076-5283693 (Counterclockwise)
Preceding gene: 17231900
Following gene: 17231898
Centisome position: 82.39
GC content: 39.06
Gene sequence:
>384_bases GTGAGCTATGGGACAGAATTGATGCAGAGTGACAACACAGTATCAATTCGTTTCTCCGATGAGTTTGAGGCAGAACTTTA CAGACTCTCAAAAAGATTCCGCAAGATTCGCTCTGATGTCCAACCGATTATCGAGCAGTTACAACAAGGGGATTTTGTAG GCGATAGAATTAGCGGATTTGGGGAAGAATATTTTGTTTACAAGGTGAGAGTTCGCAACAGTAATATCCAAAAAGGTAAA AGTGCTGGATACCGACTGATTTATCAAGTTGATTCACCCACGAATATTGTGTTGCTAACAATCTATTCTAAATCTGATCG AGAAGATATTGGTGCTAATGAAATTCGAGATATTCTGGCTGATTTTTATGGTGATTCAGGCTAA
Upstream 100 bases:
>100_bases ACAGAAGAGTTTGACCCAGACGATACACCAGTTGAGGAAATTAAAGCCAGCTTGAGGAGAGCCTTACAGCAAGCAAAGAT GGGTCAAACAAGACCAATTA
Downstream 100 bases:
>100_bases AACTAGGATACACAGCAGATTGTGGCAAGGCGATGTTAAAACACAGCATCTAGTAGAAAAATATCAAGACAATCTGCTCA CTTAACAGATATATGTCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MSYGTELMQSDNTVSIRFSDEFEAELYRLSKRFRKIRSDVQPIIEQLQQGDFVGDRISGFGEEYFVYKVRVRNSNIQKGK SAGYRLIYQVDSPTNIVLLTIYSKSDREDIGANEIRDILADFYGDSG
Sequences:
>Translated_127_residues MSYGTELMQSDNTVSIRFSDEFEAELYRLSKRFRKIRSDVQPIIEQLQQGDFVGDRISGFGEEYFVYKVRVRNSNIQKGK SAGYRLIYQVDSPTNIVLLTIYSKSDREDIGANEIRDILADFYGDSG >Mature_126_residues SYGTELMQSDNTVSIRFSDEFEAELYRLSKRFRKIRSDVQPIIEQLQQGDFVGDRISGFGEEYFVYKVRVRNSNIQKGKS AGYRLIYQVDSPTNIVLLTIYSKSDREDIGANEIRDILADFYGDSG
Specific function: Unknown
COG id: COG2026
COG function: function code JD; Cytotoxic translational repressor of toxin-antitoxin stability system
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14641; Mature: 14509
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYGTELMQSDNTVSIRFSDEFEAELYRLSKRFRKIRSDVQPIIEQLQQGDFVGDRISGF CCCCCHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCC GEEYFVYKVRVRNSNIQKGKSAGYRLIYQVDSPTNIVLLTIYSKSDREDIGANEIRDILA CCEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHH DFYGDSG HHCCCCC >Mature Secondary Structure SYGTELMQSDNTVSIRFSDEFEAELYRLSKRFRKIRSDVQPIIEQLQQGDFVGDRISGF CCCCHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCC GEEYFVYKVRVRNSNIQKGKSAGYRLIYQVDSPTNIVLLTIYSKSDREDIGANEIRDILA CCEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHH DFYGDSG HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA