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The map label for this gene is 17231898

Identifier: 17231898

GI number: 17231898

Start: 5282122

End: 5282715

Strand: Reverse

Name: 17231898

Synonym: all4406

Alternate gene names: NA

Gene position: 5282715-5282122 (Counterclockwise)

Preceding gene: 17231899

Following gene: 17231895

Centisome position: 82.37

GC content: 38.05

Gene sequence:

>594_bases
GTGTTTGGTGGGAATATTGCGGCTTTTCTGAGTCAAAATACGATAGTAATTGGCGATCGCTTACGTGCTATCCTCCAACA
ACAATTTGAACAACTGAGTGATTTAGAACAAGAGATTCTCTATTGGTTAGCAATCTGGCAACAACCCATTTCTTTTAGCC
GATTGCAAACTAATTTACTCATTTCTCTTGATCCTGCCACAGTTTTAGCAGCAATTGTCAGCTTGGAGAGGCGATCGCTT
TTAGAAAAATGGATTTGTAGTGATGCACCAGCTTTTACCTTGCAACCACTGGTGATGAAAATTGTCACTGATGAATTAGT
AGAACGTGCAACTCAAGAGATAATTCAGGTGATGCAGAGTCAAGATATCGCTGATTTTAAAGTTCTGCGAACCCATTGGT
TATTGCGTCCGGGTAGTGATGATATTGTAGGCGATCGCATTTTGCATCAACTACAAGAAAAACTCTGGCAGATTTATGGA
GCAAATCTCGTACAGAATCTTCAACAAATTTTATTACTTTTAAATGATAAATCCCCTTTAGCAACTGGTTATATTGCTTG
TAATATCACAACAATTATAAAAAAAGGGGTGTAG

Upstream 100 bases:

>100_bases
GAGAGGATTCACAGGTAAGGAACTCGGACTATCAACATTAATTCAACTTTATCGCGGTAATCCTTTAGCACTAAAACTTG
TCACCCCATTGATTCAGTCG

Downstream 100 bases:

>100_bases
GGGTTTAAGGGTGTAGGGGTGTAGGGGTGTTGTGGAGAATTACCAAATTTTAGACATATTCAAGGAAAATCCTGGTAAAA
TTGGATGTGCGCTAACTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MFGGNIAAFLSQNTIVIGDRLRAILQQQFEQLSDLEQEILYWLAIWQQPISFSRLQTNLLISLDPATVLAAIVSLERRSL
LEKWICSDAPAFTLQPLVMKIVTDELVERATQEIIQVMQSQDIADFKVLRTHWLLRPGSDDIVGDRILHQLQEKLWQIYG
ANLVQNLQQILLLLNDKSPLATGYIACNITTIIKKGV

Sequences:

>Translated_197_residues
MFGGNIAAFLSQNTIVIGDRLRAILQQQFEQLSDLEQEILYWLAIWQQPISFSRLQTNLLISLDPATVLAAIVSLERRSL
LEKWICSDAPAFTLQPLVMKIVTDELVERATQEIIQVMQSQDIADFKVLRTHWLLRPGSDDIVGDRILHQLQEKLWQIYG
ANLVQNLQQILLLLNDKSPLATGYIACNITTIIKKGV
>Mature_197_residues
MFGGNIAAFLSQNTIVIGDRLRAILQQQFEQLSDLEQEILYWLAIWQQPISFSRLQTNLLISLDPATVLAAIVSLERRSL
LEKWICSDAPAFTLQPLVMKIVTDELVERATQEIIQVMQSQDIADFKVLRTHWLLRPGSDDIVGDRILHQLQEKLWQIYG
ANLVQNLQQILLLLNDKSPLATGYIACNITTIIKKGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 15 WD repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000767
- InterPro:   IPR020472
- InterPro:   IPR002182
- InterPro:   IPR015943
- InterPro:   IPR001680
- InterPro:   IPR011046
- InterPro:   IPR019782
- InterPro:   IPR019775
- InterPro:   IPR017986
- InterPro:   IPR019781 [H]

Pfam domain/function: PF00931 NB-ARC; PF00400 WD40 [H]

EC number: NA

Molecular weight: Translated: 22379; Mature: 22379

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGGNIAAFLSQNTIVIGDRLRAILQQQFEQLSDLEQEILYWLAIWQQPISFSRLQTNLL
CCCCHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHE
ISLDPATVLAAIVSLERRSLLEKWICSDAPAFTLQPLVMKIVTDELVERATQEIIQVMQS
EEECHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QDIADFKVLRTHWLLRPGSDDIVGDRILHQLQEKLWQIYGANLVQNLQQILLLLNDKSPL
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCC
ATGYIACNITTIIKKGV
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFGGNIAAFLSQNTIVIGDRLRAILQQQFEQLSDLEQEILYWLAIWQQPISFSRLQTNLL
CCCCHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHE
ISLDPATVLAAIVSLERRSLLEKWICSDAPAFTLQPLVMKIVTDELVERATQEIIQVMQS
EEECHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QDIADFKVLRTHWLLRPGSDDIVGDRILHQLQEKLWQIYGANLVQNLQQILLLLNDKSPL
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCC
ATGYIACNITTIIKKGV
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]