| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231893
Identifier: 17231893
GI number: 17231893
Start: 5276722
End: 5277834
Strand: Reverse
Name: 17231893
Synonym: all4401
Alternate gene names: NA
Gene position: 5277834-5276722 (Counterclockwise)
Preceding gene: 17231894
Following gene: 17231892
Centisome position: 82.29
GC content: 41.6
Gene sequence:
>1113_bases ATGGCTAATAAAAAGTCAAAGTCTTCCCCAATTTATATATCAGCCGGAATTATTGCTGCATCGCTAATTTTAACTTATAC CCCTATTCCTGGGTTACAGCAAACTGTTATTATTGTCAGTGGTACAGAATTACAGGAACCATTACAACAGCTAGAGGCAA AATTTGAGCAGGAAAATCCTCAGATTAAATTAGAACTAAAGTTTCAAGGTTCCCAAGATATGGTTAACAAATTTGTTGAC CATAAAAATGATTTTAAACCTACTATATTAATTCCTGCTAATGGAGAAATTTTAGCAGAATTAAGCGATCGCCTGCGCGC CGCTAACAATACTGCCCCATTTTACGACTCTCCCCGACCCATCGCCAAAACCATATTAGTGGGTATTGCCTGGCCTGAAC GTGGCAAAGTCCTCTTTCCTGATGGACGCTTCCAATGGCAAAAAGTCGAACAAGCCATGCTAGCTAGTAACTGGGAAAAA ATCGGTGGTAATAAAGATTGGGGTAGCTTTGATTTTGTCACCACAGACCCCACCCGTTCTAACAGTGGACAGGTGACGTT AAATCTGTGGACACAATCAAAATTAGGCACAAAAGTTAACAGTAATAGTCTCAATAATCCATCTGTCCAATCGTTGTTTG GGTTGGTGAAAAAGTCAGTATATCAGCCACCCCGGTCTACAGATATTCTGTTGCAAGAATTTATTACCAGAGGCCCCAAT GATGCTGATGTAGCTACAGTCTATGAAAGTGTCGCCCTTTATCGTTGGCAACAGTCAAGTACGAATAACGGTAGACCTTA TCAAATATATTATTTAAACCCATCCATTGAATCCACAGCGACAGCCGCAATCGTCCGCCGGGACGTTGACTCAGGGACAG CGAATGCAGCCAAGAAATTTCTCGACTTTGTGACACAACCAGCACAGCAAGCAGTATTAGTTGAGTATGGTTTCCGTCCG GTGAATAATGCTGTTGATTTAAAATCTGTGCCTAAAAGTCCTTGGAGTCAAAATATTCCTGGCGCTGAAGTGAAACCAAC GGTGGAAAAACTACCGCCTCCCACACCTGAGATGATTACAGAAATGCAAAGATTATGGGAAAGGGTGAATTAA
Upstream 100 bases:
>100_bases TGGCATGATATTACTAAGTGATGAGCTTAATAGCTTATCAGAAAACCTGGAATTGTTAGTAAGTAAATAATATTCAATCA CCGGGATCAAAAGTCACTTT
Downstream 100 bases:
>100_bases TTGGTCATTGGTCATTGGTCATATCAGCAAGTGTGGTATTTTGCTTGTTATCAGCGCAAATACCACCGTCTCGTCGTTAG ATGGGAACGTCAAAAATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Protease HtpX-Like Protein
Number of amino acids: Translated: 370; Mature: 369
Protein sequence:
>370_residues MANKKSKSSPIYISAGIIAASLILTYTPIPGLQQTVIIVSGTELQEPLQQLEAKFEQENPQIKLELKFQGSQDMVNKFVD HKNDFKPTILIPANGEILAELSDRLRAANNTAPFYDSPRPIAKTILVGIAWPERGKVLFPDGRFQWQKVEQAMLASNWEK IGGNKDWGSFDFVTTDPTRSNSGQVTLNLWTQSKLGTKVNSNSLNNPSVQSLFGLVKKSVYQPPRSTDILLQEFITRGPN DADVATVYESVALYRWQQSSTNNGRPYQIYYLNPSIESTATAAIVRRDVDSGTANAAKKFLDFVTQPAQQAVLVEYGFRP VNNAVDLKSVPKSPWSQNIPGAEVKPTVEKLPPPTPEMITEMQRLWERVN
Sequences:
>Translated_370_residues MANKKSKSSPIYISAGIIAASLILTYTPIPGLQQTVIIVSGTELQEPLQQLEAKFEQENPQIKLELKFQGSQDMVNKFVD HKNDFKPTILIPANGEILAELSDRLRAANNTAPFYDSPRPIAKTILVGIAWPERGKVLFPDGRFQWQKVEQAMLASNWEK IGGNKDWGSFDFVTTDPTRSNSGQVTLNLWTQSKLGTKVNSNSLNNPSVQSLFGLVKKSVYQPPRSTDILLQEFITRGPN DADVATVYESVALYRWQQSSTNNGRPYQIYYLNPSIESTATAAIVRRDVDSGTANAAKKFLDFVTQPAQQAVLVEYGFRP VNNAVDLKSVPKSPWSQNIPGAEVKPTVEKLPPPTPEMITEMQRLWERVN >Mature_369_residues ANKKSKSSPIYISAGIIAASLILTYTPIPGLQQTVIIVSGTELQEPLQQLEAKFEQENPQIKLELKFQGSQDMVNKFVDH KNDFKPTILIPANGEILAELSDRLRAANNTAPFYDSPRPIAKTILVGIAWPERGKVLFPDGRFQWQKVEQAMLASNWEKI GGNKDWGSFDFVTTDPTRSNSGQVTLNLWTQSKLGTKVNSNSLNNPSVQSLFGLVKKSVYQPPRSTDILLQEFITRGPND ADVATVYESVALYRWQQSSTNNGRPYQIYYLNPSIESTATAAIVRRDVDSGTANAAKKFLDFVTQPAQQAVLVEYGFRPV NNAVDLKSVPKSPWSQNIPGAEVKPTVEKLPPPTPEMITEMQRLWERVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41223; Mature: 41092
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANKKSKSSPIYISAGIIAASLILTYTPIPGLQQTVIIVSGTELQEPLQQLEAKFEQENP CCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCC QIKLELKFQGSQDMVNKFVDHKNDFKPTILIPANGEILAELSDRLRAANNTAPFYDSPRP CEEEEEEECCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCH IAKTILVGIAWPERGKVLFPDGRFQWQKVEQAMLASNWEKIGGNKDWGSFDFVTTDPTRS HHHHEEEEEECCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCC NSGQVTLNLWTQSKLGTKVNSNSLNNPSVQSLFGLVKKSVYQPPRSTDILLQEFITRGPN CCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC DADVATVYESVALYRWQQSSTNNGRPYQIYYLNPSIESTATAAIVRRDVDSGTANAAKKF CCHHHHHHHHHHHHEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHH LDFVTQPAQQAVLVEYGFRPVNNAVDLKSVPKSPWSQNIPGAEVKPTVEKLPPPTPEMIT HHHHHCHHHHEEEHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHH EMQRLWERVN HHHHHHHHCC >Mature Secondary Structure ANKKSKSSPIYISAGIIAASLILTYTPIPGLQQTVIIVSGTELQEPLQQLEAKFEQENP CCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCC QIKLELKFQGSQDMVNKFVDHKNDFKPTILIPANGEILAELSDRLRAANNTAPFYDSPRP CEEEEEEECCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCH IAKTILVGIAWPERGKVLFPDGRFQWQKVEQAMLASNWEKIGGNKDWGSFDFVTTDPTRS HHHHEEEEEECCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCC NSGQVTLNLWTQSKLGTKVNSNSLNNPSVQSLFGLVKKSVYQPPRSTDILLQEFITRGPN CCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC DADVATVYESVALYRWQQSSTNNGRPYQIYYLNPSIESTATAAIVRRDVDSGTANAAKKF CCHHHHHHHHHHHHEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHH LDFVTQPAQQAVLVEYGFRPVNNAVDLKSVPKSPWSQNIPGAEVKPTVEKLPPPTPEMIT HHHHHCHHHHEEEHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHH EMQRLWERVN HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA