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The map label for this gene is yloA [H]

Identifier: 17231866

GI number: 17231866

Start: 5238616

End: 5240355

Strand: Reverse

Name: yloA [H]

Synonym: all4374

Alternate gene names: 17231866

Gene position: 5240355-5238616 (Counterclockwise)

Preceding gene: 17231867

Following gene: 17231864

Centisome position: 81.7

GC content: 43.74

Gene sequence:

>1740_bases
ATGCAGCCAGTAGACTTTACCACCCTTACAGCTACTTGTAGCGAACTCCACGCTCACTGGCTACCATCCCGCCTAGAGCA
AGTTTATCAGCGCGATCGCTACACTATTGCTATAGCGTTACGTACCCTCGATAAAAGAGGTTGGTTACAAATTTCTTGGC
ATCCTCAAGCAACTCATATTTGTATTGGTGATCCACCTCCACGTACACCAGATACCTTTACCTTCAGCCAACAACTAGTC
CACCAGTTGGGGGGATTAGCCTTAGTTGCAATTGAAGCGATCGCCCCTTGGGAGCGTGTAATTGATTTACAATTTGCCCG
CCGCCCTGGAGATGCTGCACTGTATCACATCTACGGGGAAATTATGGGTAAATACAGTAATGTGATTCTCACCGATGCCA
ACAATCTAATTATTACTGCTGCCCATCAAGTGAGTCAGCAACAATCAAGCGTGCGTCCTATCCTCACAGGACAACCTTAT
GAAGCACCGCCCAAACTCACCGGAACTATCCCCAGTTTGCAGGAAACTCAAGCAAGGTGGCAAGAAAGAGTCAGTTTAGT
CCCAGGAGCAATTAAACGTCAGTTGCTCAAAAGTTATAGCGGCTTGAGTGCTGTGTTGGTAGAATCCATGTTATTGGTAG
CCAACATTGCCCCAGAAACTACCACGGATACCCTACATCCTGAAGACTGGCAAAGGTTATTTGCACGCTGGCAAGAATGG
CTACACACCTTAGATAGTGGTAAATTTCAACCAGCTTGGATGGCAAACGGATATACAGTTATGGGTTGGGGTGCTGTTGC
ACCAGTCCAAGATATCCAAACATTAATCAACGAATACTATACCAAACAGCTAAATCAACAATTATTTGCTCAATTACGCC
ATCAACTGACTCAGAAATTAAGTAATATTTTAGGCAAATTACGTAATAAAGCCCAAACCTTTAGCGATCGCCTACAGCAA
TCAGATAGAGCCGATGAATATCGCCAAAAAGCTGATTTATTAATGGCGCACCTGCAAAATTGGCAACCAGGGATGAAAGA
AATTAGCATACCTGATTTTGAGACAGGTGAGCCTGTAGCGATCGCTCTTTTGCCTGATAAAAATGCTGTGCAGAATGCCC
AAAATCTCTACAAACAACACCAAAAACTCAAACGCGCTCGCATAGCTGTCGAACCGCTACTGCAAGAAGTACAAGCAGAA
ATCGATTATTTAGAACAAGTAGAAGCTGCAATTTCCCAAATAGATAACTACCAAACAGCAGAAGATTTGCAAGCTTTAGA
AGAAATCCGCGACGAGTTAATTGGACAGAAATATTTAGAAGAGTTAGAGTATCGTAGCCGCAATAACAACGAAACTGCTA
GCACTAACTTTCACAACTATCGTACCCCTAACGGTTTCACAGTCTTAATCGGTCGCAACAATCGTCAAAATGACCAATTA
ACATTTCGAGTAGCCGGAGATTATGACCTATGGTTCCATGCCCAAGAAATCCCTGGCAGCCATGTACTATTGCGTTTAGA
ACCGGGTACAGCACCAGAACTATCAGACTTACAATATGTAGCCGATTTAGCAGCTTACTACAGTCGCGGTCGCCAGAGTG
ATCAAGTACCAGTCGTTTACACTCAACCCAAACACGTTTATAAACCCAAAGGTGCTAAACCAGGAATTGCTATTTACAAA
CAGGAACGCATCCTTTGGGGAAAACCGCAGTTAGTAGATATAGAGAAGGTAGGAAGTTGA

Upstream 100 bases:

>100_bases
TTCAGAATAGCTAACGGCTTTTTTAATTTATATAACTGAGAATTAGGGAAGAGAGAAGTATACTAACCATTGTCTTGTAA
ATGCCAGTGACTAATTTGTT

Downstream 100 bases:

>100_bases
GGGAGCAGGGGAGCAGGGAGCAGGGAACAGGGAGCAGGGGAGCAGGGAGCAGGGAGCAGGGGAGCGGGGGGAGAGAACTA
GAACTTACTTCCAGAGTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 579; Mature: 579

Protein sequence:

>579_residues
MQPVDFTTLTATCSELHAHWLPSRLEQVYQRDRYTIAIALRTLDKRGWLQISWHPQATHICIGDPPPRTPDTFTFSQQLV
HQLGGLALVAIEAIAPWERVIDLQFARRPGDAALYHIYGEIMGKYSNVILTDANNLIITAAHQVSQQQSSVRPILTGQPY
EAPPKLTGTIPSLQETQARWQERVSLVPGAIKRQLLKSYSGLSAVLVESMLLVANIAPETTTDTLHPEDWQRLFARWQEW
LHTLDSGKFQPAWMANGYTVMGWGAVAPVQDIQTLINEYYTKQLNQQLFAQLRHQLTQKLSNILGKLRNKAQTFSDRLQQ
SDRADEYRQKADLLMAHLQNWQPGMKEISIPDFETGEPVAIALLPDKNAVQNAQNLYKQHQKLKRARIAVEPLLQEVQAE
IDYLEQVEAAISQIDNYQTAEDLQALEEIRDELIGQKYLEELEYRSRNNNETASTNFHNYRTPNGFTVLIGRNNRQNDQL
TFRVAGDYDLWFHAQEIPGSHVLLRLEPGTAPELSDLQYVADLAAYYSRGRQSDQVPVVYTQPKHVYKPKGAKPGIAIYK
QERILWGKPQLVDIEKVGS

Sequences:

>Translated_579_residues
MQPVDFTTLTATCSELHAHWLPSRLEQVYQRDRYTIAIALRTLDKRGWLQISWHPQATHICIGDPPPRTPDTFTFSQQLV
HQLGGLALVAIEAIAPWERVIDLQFARRPGDAALYHIYGEIMGKYSNVILTDANNLIITAAHQVSQQQSSVRPILTGQPY
EAPPKLTGTIPSLQETQARWQERVSLVPGAIKRQLLKSYSGLSAVLVESMLLVANIAPETTTDTLHPEDWQRLFARWQEW
LHTLDSGKFQPAWMANGYTVMGWGAVAPVQDIQTLINEYYTKQLNQQLFAQLRHQLTQKLSNILGKLRNKAQTFSDRLQQ
SDRADEYRQKADLLMAHLQNWQPGMKEISIPDFETGEPVAIALLPDKNAVQNAQNLYKQHQKLKRARIAVEPLLQEVQAE
IDYLEQVEAAISQIDNYQTAEDLQALEEIRDELIGQKYLEELEYRSRNNNETASTNFHNYRTPNGFTVLIGRNNRQNDQL
TFRVAGDYDLWFHAQEIPGSHVLLRLEPGTAPELSDLQYVADLAAYYSRGRQSDQVPVVYTQPKHVYKPKGAKPGIAIYK
QERILWGKPQLVDIEKVGS
>Mature_579_residues
MQPVDFTTLTATCSELHAHWLPSRLEQVYQRDRYTIAIALRTLDKRGWLQISWHPQATHICIGDPPPRTPDTFTFSQQLV
HQLGGLALVAIEAIAPWERVIDLQFARRPGDAALYHIYGEIMGKYSNVILTDANNLIITAAHQVSQQQSSVRPILTGQPY
EAPPKLTGTIPSLQETQARWQERVSLVPGAIKRQLLKSYSGLSAVLVESMLLVANIAPETTTDTLHPEDWQRLFARWQEW
LHTLDSGKFQPAWMANGYTVMGWGAVAPVQDIQTLINEYYTKQLNQQLFAQLRHQLTQKLSNILGKLRNKAQTFSDRLQQ
SDRADEYRQKADLLMAHLQNWQPGMKEISIPDFETGEPVAIALLPDKNAVQNAQNLYKQHQKLKRARIAVEPLLQEVQAE
IDYLEQVEAAISQIDNYQTAEDLQALEEIRDELIGQKYLEELEYRSRNNNETASTNFHNYRTPNGFTVLIGRNNRQNDQL
TFRVAGDYDLWFHAQEIPGSHVLLRLEPGTAPELSDLQYVADLAAYYSRGRQSDQVPVVYTQPKHVYKPKGAKPGIAIYK
QERILWGKPQLVDIEKVGS

Specific function: Unknown

COG id: COG1293

COG function: function code K; Predicted RNA-binding protein homologous to eukaryotic snRNP

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SDCCAG1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008532
- InterPro:   IPR008616 [H]

Pfam domain/function: PF05670 DUF814; PF05833 FbpA [H]

EC number: NA

Molecular weight: Translated: 65997; Mature: 65997

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPVDFTTLTATCSELHAHWLPSRLEQVYQRDRYTIAIALRTLDKRGWLQISWHPQATHI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEEEECCCCCEE
CIGDPPPRTPDTFTFSQQLVHQLGGLALVAIEAIAPWERVIDLQFARRPGDAALYHIYGE
EECCCCCCCCCCCHHHHHHHHHHCCHHEEHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHH
IMGKYSNVILTDANNLIITAAHQVSQQQSSVRPILTGQPYEAPPKLTGTIPSLQETQARW
HHHHHCCEEEECCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
QERVSLVPGAIKRQLLKSYSGLSAVLVESMLLVANIAPETTTDTLHPEDWQRLFARWQEW
HHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
LHTLDSGKFQPAWMANGYTVMGWGAVAPVQDIQTLINEYYTKQLNQQLFAQLRHQLTQKL
HHHHHCCCCCCEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SNILGKLRNKAQTFSDRLQQSDRADEYRQKADLLMAHLQNWQPGMKEISIPDFETGEPVA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE
IALLPDKNAVQNAQNLYKQHQKLKRARIAVEPLLQEVQAEIDYLEQVEAAISQIDNYQTA
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
EDLQALEEIRDELIGQKYLEELEYRSRNNNETASTNFHNYRTPNGFTVLIGRNNRQNDQL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEE
TFRVAGDYDLWFHAQEIPGSHVLLRLEPGTAPELSDLQYVADLAAYYSRGRQSDQVPVVY
EEEEECCCEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEE
TQPKHVYKPKGAKPGIAIYKQERILWGKPQLVDIEKVGS
ECCCCCCCCCCCCCCEEEEECCEEEECCCCEECHHCCCC
>Mature Secondary Structure
MQPVDFTTLTATCSELHAHWLPSRLEQVYQRDRYTIAIALRTLDKRGWLQISWHPQATHI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEEEECCCCCEE
CIGDPPPRTPDTFTFSQQLVHQLGGLALVAIEAIAPWERVIDLQFARRPGDAALYHIYGE
EECCCCCCCCCCCHHHHHHHHHHCCHHEEHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHH
IMGKYSNVILTDANNLIITAAHQVSQQQSSVRPILTGQPYEAPPKLTGTIPSLQETQARW
HHHHHCCEEEECCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
QERVSLVPGAIKRQLLKSYSGLSAVLVESMLLVANIAPETTTDTLHPEDWQRLFARWQEW
HHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
LHTLDSGKFQPAWMANGYTVMGWGAVAPVQDIQTLINEYYTKQLNQQLFAQLRHQLTQKL
HHHHHCCCCCCEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SNILGKLRNKAQTFSDRLQQSDRADEYRQKADLLMAHLQNWQPGMKEISIPDFETGEPVA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE
IALLPDKNAVQNAQNLYKQHQKLKRARIAVEPLLQEVQAEIDYLEQVEAAISQIDNYQTA
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
EDLQALEEIRDELIGQKYLEELEYRSRNNNETASTNFHNYRTPNGFTVLIGRNNRQNDQL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEE
TFRVAGDYDLWFHAQEIPGSHVLLRLEPGTAPELSDLQYVADLAAYYSRGRQSDQVPVVY
EEEEECCCEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEE
TQPKHVYKPKGAKPGIAIYKQERILWGKPQLVDIEKVGS
ECCCCCCCCCCCCCCEEEEECCEEEECCCCEECHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 9534248 [H]