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The map label for this gene is yfgC [C]

Identifier: 17231863

GI number: 17231863

Start: 5236720

End: 5237610

Strand: Reverse

Name: yfgC [C]

Synonym: all4371

Alternate gene names: 17231863

Gene position: 5237610-5236720 (Counterclockwise)

Preceding gene: 17231864

Following gene: 17231861

Centisome position: 81.66

GC content: 45.9

Gene sequence:

>891_bases
GTGTGGTTCCAAAATTATCTTCTAGCCAAATTTATGATGAACAGGAAAGGCTTAATGGCAAATTACCGTGTGTGGCGGCG
GCGCTGGTTTTATCCATTAATTTCGGTGGTAGTCGCTGTGAGTCTATGTTTGGGTACACCTTTGGTTGGAAGGGCTATAG
ACTTACGACCCCTTTTATTACAAGGTGTGCAAGTACTTCAGCTGTCTAATATATCCGATCGCCAAGAAGTTGATCTGGGC
AATCAGATGAATCAGCAATTACGTAGTAGCGAAGTGAAAATTTCTCGGAATGCAGAAATTACTCGCTACGTAGACCAAAT
TGGACAGCGCTTGGTTGCAAATAGCGATCGCCCCAATCTTCCTTTTACCTTCCAAGTTGTGGAAAATGATGCTGTTAACG
CCTTTGCCACTTTAGGCGGCTTTGTTTATATCCATACGGGTTTACTGAAAACCGCAGACAATGAAGCGGAATTAGCCAGT
GTGATAGCTCATGAAATTGGTCACATCGGCGGTAGACATCTAGTAAAACAGATGCGACAACGAGCGCTGGCTAGTGGTTT
AGCTTCAGCTACAGGTTTAGACCGCAATACAGCTGTAGGACTGGGTGTGGAACTAGCACTAAACCGTCCCCGCAGCCGTC
AAGATGAGTTTGATGCTGACACCAGAGGGTTAAGAACTTTAACAAGAGCGGGTTATGCACCATCGGCGATGGTTTCATTC
ATGCAGAAACTCACGAAAGGTGGTGGTTCTGTGCCGGCATTTTTGAGTACTCACCCAGCCACAGGCGATCGCATTACTTC
TCTCAGGCGTGCTATTAATTCCCAAGGCAGTAATGGGCGTGATGGCTTAGATAATGCTGCCTATCGCGCTAGAATTCGGT
CAATACTTTAA

Upstream 100 bases:

>100_bases
AGAAAAGAACTGTGGACTATTGACCAATGACAAATGACGACTGACAACTGACCAAGTTAAAAATGCAACTTACAAAAGGA
TAGATACGTCTTCTTATTTA

Downstream 100 bases:

>100_bases
AAAGTGCTGAGTGCTGATCTAAAAGACCACCCACACTTTGTGGGGCATTTACCCAGTGTACTTTTCTTACTCAGCATTCA
GCACTGAATGAAACTTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MWFQNYLLAKFMMNRKGLMANYRVWRRRWFYPLISVVVAVSLCLGTPLVGRAIDLRPLLLQGVQVLQLSNISDRQEVDLG
NQMNQQLRSSEVKISRNAEITRYVDQIGQRLVANSDRPNLPFTFQVVENDAVNAFATLGGFVYIHTGLLKTADNEAELAS
VIAHEIGHIGGRHLVKQMRQRALASGLASATGLDRNTAVGLGVELALNRPRSRQDEFDADTRGLRTLTRAGYAPSAMVSF
MQKLTKGGGSVPAFLSTHPATGDRITSLRRAINSQGSNGRDGLDNAAYRARIRSIL

Sequences:

>Translated_296_residues
MWFQNYLLAKFMMNRKGLMANYRVWRRRWFYPLISVVVAVSLCLGTPLVGRAIDLRPLLLQGVQVLQLSNISDRQEVDLG
NQMNQQLRSSEVKISRNAEITRYVDQIGQRLVANSDRPNLPFTFQVVENDAVNAFATLGGFVYIHTGLLKTADNEAELAS
VIAHEIGHIGGRHLVKQMRQRALASGLASATGLDRNTAVGLGVELALNRPRSRQDEFDADTRGLRTLTRAGYAPSAMVSF
MQKLTKGGGSVPAFLSTHPATGDRITSLRRAINSQGSNGRDGLDNAAYRARIRSIL
>Mature_296_residues
MWFQNYLLAKFMMNRKGLMANYRVWRRRWFYPLISVVVAVSLCLGTPLVGRAIDLRPLLLQGVQVLQLSNISDRQEVDLG
NQMNQQLRSSEVKISRNAEITRYVDQIGQRLVANSDRPNLPFTFQVVENDAVNAFATLGGFVYIHTGLLKTADNEAELAS
VIAHEIGHIGGRHLVKQMRQRALASGLASATGLDRNTAVGLGVELALNRPRSRQDEFDADTRGLRTLTRAGYAPSAMVSF
MQKLTKGGGSVPAFLSTHPATGDRITSLRRAINSQGSNGRDGLDNAAYRARIRSIL

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=228, Percent_Identity=33.7719298245614, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI87082185, Length=248, Percent_Identity=28.6290322580645, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI87081800, Length=251, Percent_Identity=23.5059760956175, Blast_Score=69, Evalue=5e-13,
Organism=Saccharomyces cerevisiae, GI6322940, Length=147, Percent_Identity=31.9727891156463, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 32721; Mature: 32721

Theoretical pI: Translated: 11.08; Mature: 11.08

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWFQNYLLAKFMMNRKGLMANYRVWRRRWFYPLISVVVAVSLCLGTPLVGRAIDLRPLLL
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHH
QGVQVLQLSNISDRQEVDLGNQMNQQLRSSEVKISRNAEITRYVDQIGQRLVANSDRPNL
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHCCCCCCCC
PFTFQVVENDAVNAFATLGGFVYIHTGLLKTADNEAELASVIAHEIGHIGGRHLVKQMRQ
CEEEEEECCCHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
RALASGLASATGLDRNTAVGLGVELALNRPRSRQDEFDADTRGLRTLTRAGYAPSAMVSF
HHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHH
MQKLTKGGGSVPAFLSTHPATGDRITSLRRAINSQGSNGRDGLDNAAYRARIRSIL
HHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MWFQNYLLAKFMMNRKGLMANYRVWRRRWFYPLISVVVAVSLCLGTPLVGRAIDLRPLLL
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHH
QGVQVLQLSNISDRQEVDLGNQMNQQLRSSEVKISRNAEITRYVDQIGQRLVANSDRPNL
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHCCCCCCCC
PFTFQVVENDAVNAFATLGGFVYIHTGLLKTADNEAELASVIAHEIGHIGGRHLVKQMRQ
CEEEEEECCCHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
RALASGLASATGLDRNTAVGLGVELALNRPRSRQDEFDADTRGLRTLTRAGYAPSAMVSF
HHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHH
MQKLTKGGGSVPAFLSTHPATGDRITSLRRAINSQGSNGRDGLDNAAYRARIRSIL
HHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]