Click here to switch to the map view.

The map label for this gene is yjeA [H]

Identifier: 17231837

GI number: 17231837

Start: 5204372

End: 5205289

Strand: Reverse

Name: yjeA [H]

Synonym: all4345

Alternate gene names: 17231837

Gene position: 5205289-5204372 (Counterclockwise)

Preceding gene: 17231840

Following gene: 17231835

Centisome position: 81.16

GC content: 38.78

Gene sequence:

>918_bases
GTGGAAAACAATAAGTCTTTTCTTTGGCCACAAGGAATATTATTTGCATTATTAGCTCTCAGTGCTAGTTTGAGTGTTGG
TGTGATGATGTTGCTCAAACCAAACGCATCAGACGCACAAAGCAGAGTCAATATCAACAATATCAACATAACTACTACAC
CCGCTAAAGCAGGAACTCGGCAGCGAATTGAGAAATTCAAATCGATGATGCTGACTAGTTGGCAGCAAGAAGCAAAAACT
AAGGGTTTGTCTTATGCTGTTCCGTCTCGTTTTCAAGGTGCGACTATCAAAACAGCAAAACTCACCCACGGACAGAAAGT
CATTGCACTTACTTTTGATGACGGTCCTTGGCCTGAAAGTACTACACAAGTATTAGATATTCTTAAACAAAATAATATTA
AAGCAACGTTTTTTGTCGTTGGACAAAACGTAAAAAATTACCCAGATTTATTAAGAAGGGTGGCTGCTGAAGGACACGCC
ATCGGCAATCATACTTGGCATCATTGGTATCATTTCATGAATCCTCAGGTAGCAGCTTATGAAGTTAATAATACAACAAA
CCTTATATATCAAATAACAGGTGTGAAAACAGACTTATTTCGTCCACCGGGAGGCATGATGAATAATGGACTAGTCTCCT
ATGCCAGAAATAATAAGTATGCGGTGATCATGTGGTCATCAGACTCAATTGACTACTCACGTCCCAGCGTACCACGGTTA
ATTAATAATGTGTTTAGACTAGCAAAACCTGGTGGGATTGTACTTATGCACGACGGTGGTGGTAATCGGACTCAAACTGT
ACAAGCATTACCAGAAATTATTGCTAGATTTCGCAAGCAAGGTTACAGTTTTGTAACTGTTCCCGAACTCTTAGAAATGC
AAGATAAAGATGAAAAATTAATTGCTAATCAAAAGTAA

Upstream 100 bases:

>100_bases
TAATAGAAATTAGCTCAGTATTTAAATGTTAATACAGAAATGTGTAAAAAGTTACTGTCGTCATCGTCACAAAGAATTCT
ACCCCTGAAGGAGCTATGAA

Downstream 100 bases:

>100_bases
TTTGTAATAAAAAAAGACGCGATACATCGCGTCTTTTTTTTAGCTAATAGTCAAAAGTAACTGTTAACCTACTAATAACC
AATCACTAGACAGAACTCAG

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MENNKSFLWPQGILFALLALSASLSVGVMMLLKPNASDAQSRVNINNINITTTPAKAGTRQRIEKFKSMMLTSWQQEAKT
KGLSYAVPSRFQGATIKTAKLTHGQKVIALTFDDGPWPESTTQVLDILKQNNIKATFFVVGQNVKNYPDLLRRVAAEGHA
IGNHTWHHWYHFMNPQVAAYEVNNTTNLIYQITGVKTDLFRPPGGMMNNGLVSYARNNKYAVIMWSSDSIDYSRPSVPRL
INNVFRLAKPGGIVLMHDGGGNRTQTVQALPEIIARFRKQGYSFVTVPELLEMQDKDEKLIANQK

Sequences:

>Translated_305_residues
MENNKSFLWPQGILFALLALSASLSVGVMMLLKPNASDAQSRVNINNINITTTPAKAGTRQRIEKFKSMMLTSWQQEAKT
KGLSYAVPSRFQGATIKTAKLTHGQKVIALTFDDGPWPESTTQVLDILKQNNIKATFFVVGQNVKNYPDLLRRVAAEGHA
IGNHTWHHWYHFMNPQVAAYEVNNTTNLIYQITGVKTDLFRPPGGMMNNGLVSYARNNKYAVIMWSSDSIDYSRPSVPRL
INNVFRLAKPGGIVLMHDGGGNRTQTVQALPEIIARFRKQGYSFVTVPELLEMQDKDEKLIANQK
>Mature_305_residues
MENNKSFLWPQGILFALLALSASLSVGVMMLLKPNASDAQSRVNINNINITTTPAKAGTRQRIEKFKSMMLTSWQQEAKT
KGLSYAVPSRFQGATIKTAKLTHGQKVIALTFDDGPWPESTTQVLDILKQNNIKATFFVVGQNVKNYPDLLRRVAAEGHA
IGNHTWHHWYHFMNPQVAAYEVNNTTNLIYQITGVKTDLFRPPGGMMNNGLVSYARNNKYAVIMWSSDSIDYSRPSVPRL
INNVFRLAKPGGIVLMHDGGGNRTQTVQALPEIIARFRKQGYSFVTVPELLEMQDKDEKLIANQK

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323339, Length=167, Percent_Identity=34.7305389221557, Blast_Score=82, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6323338, Length=186, Percent_Identity=29.0322580645161, Blast_Score=79, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021729
- InterPro:   IPR011330
- InterPro:   IPR017219
- InterPro:   IPR002509 [H]

Pfam domain/function: PF11738 DUF3298; PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 34166; Mature: 34166

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENNKSFLWPQGILFALLALSASLSVGVMMLLKPNASDAQSRVNINNINITTTPAKAGTR
CCCCCCEECHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHEEEECEEEEEECCCCCCHH
QRIEKFKSMMLTSWQQEAKTKGLSYAVPSRFQGATIKTAKLTHGQKVIALTFDDGPWPES
HHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCH
TTQVLDILKQNNIKATFFVVGQNVKNYPDLLRRVAAEGHAIGNHTWHHWYHFMNPQVAAY
HHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHEECCCEEEEE
EVNNTTNLIYQITGVKTDLFRPPGGMMNNGLVSYARNNKYAVIMWSSDSIDYSRPSVPRL
EECCCCEEEEEEECCEEECCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCHHHH
INNVFRLAKPGGIVLMHDGGGNRTQTVQALPEIIARFRKQGYSFVTVPELLEMQDKDEKL
HHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCCCCCHHH
IANQK
HCCCC
>Mature Secondary Structure
MENNKSFLWPQGILFALLALSASLSVGVMMLLKPNASDAQSRVNINNINITTTPAKAGTR
CCCCCCEECHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHEEEECEEEEEECCCCCCHH
QRIEKFKSMMLTSWQQEAKTKGLSYAVPSRFQGATIKTAKLTHGQKVIALTFDDGPWPES
HHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCH
TTQVLDILKQNNIKATFFVVGQNVKNYPDLLRRVAAEGHAIGNHTWHHWYHFMNPQVAAY
HHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHEECCCEEEEE
EVNNTTNLIYQITGVKTDLFRPPGGMMNNGLVSYARNNKYAVIMWSSDSIDYSRPSVPRL
EECCCCEEEEEEECCEEECCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCHHHH
INNVFRLAKPGGIVLMHDGGGNRTQTVQALPEIIARFRKQGYSFVTVPELLEMQDKDEKL
HHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCCCCCHHH
IANQK
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]