| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231835
Identifier: 17231835
GI number: 17231835
Start: 5196744
End: 5198726
Strand: Reverse
Name: 17231835
Synonym: all4343
Alternate gene names: NA
Gene position: 5198726-5196744 (Counterclockwise)
Preceding gene: 17231837
Following gene: 17231834
Centisome position: 81.06
GC content: 47.0
Gene sequence:
>1983_bases ATGGACAAAATGACAAATTATTGCCGACGAAAAAATCACAATATTGTTACTAAACCATTAAGATACAGTTTCTTGCCAGC TATTGTGTCCTCTCTAACGGCAATATCACTATGTTTGACTGCTGCCTATGCCACTACCGCCCAGCAGCCACAAAAAGTTG GACAAGCTGCACCTCGTTCAACACCACCGGCATCAGTGAGATTATCTTCAGGTAGCCAAATTTCTCTCAATGGTCGCACC TTACCAGGAGCTTGGTTGCAGCAACCAGGAGCAATACTGATCAGCGACGGCGCTCTTAGGCAATTAATCGGGATAGATTT ATTAAGCAGCAACAACCCAGCTAGACAACCAGTTGTGTGGTTTTCATCAACTACCCAGCCATTAGTTTTAGCAACGAAGC TTCAGGGTGGATATCGCTATCTAGATATTACTAATTTTGCCCAAATAGCAGGATGGCAGATCCAACCCCAAGGTAACACA TTAGCGATCGCTACTCCCTCAGGGCAAGTAAGAAATATTCGCTCTAGTCAGCGACCAGGAACCCCACTTGTCCCATCTTT GCCAGCAACTCGCATTGTTGTGGACTTAAACCGCCCGACACCTTGGCAAGTCAGACAAGGGCAACCAATCAGACCCCCAG TTGACCCCAATACACCCGATGCCAAGCCTCCCGCGTCTACCCATAGAGAGTGGACAATCGTCCTAGAAGGCATAGCTGAT GAGGGTTTAATTCAGCGCTACACACCTTTACCAATAGCGCCGCCACCTGCATCTGATCCAAATTTACTCAAACAATTACC GACACCTGAACCATTAATCACAAAAGTAGAGGTGGTGAATAACCAAACCCTAATTCGTCTCAGGGTTCCCTTGGCTTTAT CTCCTAAGGTTAGCACCATCAATAACCCCGATCGCCTAATTATCGACTTGCGTCCTGACCCTTTGGAACCAAGAGATATA ACCTGGGCAACAGGACTGCGCTGGCGACAACAGTTTGTCAATTTAGGTACAAATCGTTTCCCTGTCGTCCTCTTGGAAGT CAACCCCAGGACTATCGGACTAACTTTAAAACCAATTGTCACCAACCCAGATACTTTAGTAGGCACGGCACCCATATTGC AAACGGCCCAACGCTACTTTGCAGTAGGTGCAATTAACGGGGGATATTTTAACCGCAATAACCGCTATCCCTTAGGCGCA ATTCGTCAGAATAATCAGTGGTTATCTAGCCCTATCTTAAATAGAGGTGCGATCGCTTGGAACGATGCCGGACAATTTTA CTTTGGTCGTCTCAGCTTACAAGAGACTTTAGCGACATCTAGTAATTTGCGAGTACCAATCTTAGCCCTTAACAGTGGCT ATGTCCAGAACGGTATAGCTCGTTATACACCAGCCTGGGGCAAGATGTACACTCCCTTAACTGACAATGAACGAATTGTC ATAGTCCAAAACAACAAAATTACCAATCAGTTTCCAGGGAATAAAGCAGGTCAAACTAACTTTCCTATCCCTAACAATGG CTACTTACTTACATTACGTGGCAATGCCACCACGGTAGCATCACAACTCCCCGTCGGTACTGATGTGCAGATTACCAGCG CCACTACACCTGGTGAGTTCAACCGTTACCCCCACATCATTGGAGCCGGCCCCTTACTCCTCCAAAATAGTCAAATCGTC CTCGATGCCAAAAGCGAACAATTTAGTAACGCTTTTATTGCTGAAAGGGCTGTTCGTAGTGGCATCTGCACTACCGCAAA TAATACCTTATTGATTGCCGCAGTCCATAACCGTGCAGGCGGCCCAGGCCCAAACCTAGCAGAACACGCTCAACTGATGA AACTGTTAGGCTGTGTAAACGCCCTCAACCTAGACGGTGGTAGCTCAACTAGCCTGTATCTAAGTGGGCAACTCTTAGAT CGCTATCCTAACACCGCCGCCCGCGTCCACAACGGCATCGGGATTTTTCTCCGACCAAAATAG
Upstream 100 bases:
>100_bases TCATATTTATTACTAAATTAGCTCTCTATGTTTCAAGATTTCCACACAATTAGCTAACTAGGTCGTTGGGTGATAGGTTT CAAAAGTAACTATGTAAATT
Downstream 100 bases:
>100_bases GGGTCTAGGCAGATAGTTTAGATAAGTAAGTAGGTGGATGTGAATATTGATGATTAGGGTTGTGCAGGAGAAAAGAGGGT TTTAGCCTAGTTTCTCTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 660; Mature: 660
Protein sequence:
>660_residues MDKMTNYCRRKNHNIVTKPLRYSFLPAIVSSLTAISLCLTAAYATTAQQPQKVGQAAPRSTPPASVRLSSGSQISLNGRT LPGAWLQQPGAILISDGALRQLIGIDLLSSNNPARQPVVWFSSTTQPLVLATKLQGGYRYLDITNFAQIAGWQIQPQGNT LAIATPSGQVRNIRSSQRPGTPLVPSLPATRIVVDLNRPTPWQVRQGQPIRPPVDPNTPDAKPPASTHREWTIVLEGIAD EGLIQRYTPLPIAPPPASDPNLLKQLPTPEPLITKVEVVNNQTLIRLRVPLALSPKVSTINNPDRLIIDLRPDPLEPRDI TWATGLRWRQQFVNLGTNRFPVVLLEVNPRTIGLTLKPIVTNPDTLVGTAPILQTAQRYFAVGAINGGYFNRNNRYPLGA IRQNNQWLSSPILNRGAIAWNDAGQFYFGRLSLQETLATSSNLRVPILALNSGYVQNGIARYTPAWGKMYTPLTDNERIV IVQNNKITNQFPGNKAGQTNFPIPNNGYLLTLRGNATTVASQLPVGTDVQITSATTPGEFNRYPHIIGAGPLLLQNSQIV LDAKSEQFSNAFIAERAVRSGICTTANNTLLIAAVHNRAGGPGPNLAEHAQLMKLLGCVNALNLDGGSSTSLYLSGQLLD RYPNTAARVHNGIGIFLRPK
Sequences:
>Translated_660_residues MDKMTNYCRRKNHNIVTKPLRYSFLPAIVSSLTAISLCLTAAYATTAQQPQKVGQAAPRSTPPASVRLSSGSQISLNGRT LPGAWLQQPGAILISDGALRQLIGIDLLSSNNPARQPVVWFSSTTQPLVLATKLQGGYRYLDITNFAQIAGWQIQPQGNT LAIATPSGQVRNIRSSQRPGTPLVPSLPATRIVVDLNRPTPWQVRQGQPIRPPVDPNTPDAKPPASTHREWTIVLEGIAD EGLIQRYTPLPIAPPPASDPNLLKQLPTPEPLITKVEVVNNQTLIRLRVPLALSPKVSTINNPDRLIIDLRPDPLEPRDI TWATGLRWRQQFVNLGTNRFPVVLLEVNPRTIGLTLKPIVTNPDTLVGTAPILQTAQRYFAVGAINGGYFNRNNRYPLGA IRQNNQWLSSPILNRGAIAWNDAGQFYFGRLSLQETLATSSNLRVPILALNSGYVQNGIARYTPAWGKMYTPLTDNERIV IVQNNKITNQFPGNKAGQTNFPIPNNGYLLTLRGNATTVASQLPVGTDVQITSATTPGEFNRYPHIIGAGPLLLQNSQIV LDAKSEQFSNAFIAERAVRSGICTTANNTLLIAAVHNRAGGPGPNLAEHAQLMKLLGCVNALNLDGGSSTSLYLSGQLLD RYPNTAARVHNGIGIFLRPK >Mature_660_residues MDKMTNYCRRKNHNIVTKPLRYSFLPAIVSSLTAISLCLTAAYATTAQQPQKVGQAAPRSTPPASVRLSSGSQISLNGRT LPGAWLQQPGAILISDGALRQLIGIDLLSSNNPARQPVVWFSSTTQPLVLATKLQGGYRYLDITNFAQIAGWQIQPQGNT LAIATPSGQVRNIRSSQRPGTPLVPSLPATRIVVDLNRPTPWQVRQGQPIRPPVDPNTPDAKPPASTHREWTIVLEGIAD EGLIQRYTPLPIAPPPASDPNLLKQLPTPEPLITKVEVVNNQTLIRLRVPLALSPKVSTINNPDRLIIDLRPDPLEPRDI TWATGLRWRQQFVNLGTNRFPVVLLEVNPRTIGLTLKPIVTNPDTLVGTAPILQTAQRYFAVGAINGGYFNRNNRYPLGA IRQNNQWLSSPILNRGAIAWNDAGQFYFGRLSLQETLATSSNLRVPILALNSGYVQNGIARYTPAWGKMYTPLTDNERIV IVQNNKITNQFPGNKAGQTNFPIPNNGYLLTLRGNATTVASQLPVGTDVQITSATTPGEFNRYPHIIGAGPLLLQNSQIV LDAKSEQFSNAFIAERAVRSGICTTANNTLLIAAVHNRAGGPGPNLAEHAQLMKLLGCVNALNLDGGSSTSLYLSGQLLD RYPNTAARVHNGIGIFLRPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71794; Mature: 71794
Theoretical pI: Translated: 10.74; Mature: 10.74
Prosite motif: PS00867 CPSASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKMTNYCRRKNHNIVTKPLRYSFLPAIVSSLTAISLCLTAAYATTAQQPQKVGQAAPRS CCHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCC TPPASVRLSSGSQISLNGRTLPGAWLQQPGAILISDGALRQLIGIDLLSSNNPARQPVVW CCCCEEEECCCCEEEECCCCCCCHHHCCCCEEEEECCHHHHHHCEEEECCCCCCCCCEEE FSSTTQPLVLATKLQGGYRYLDITNFAQIAGWQIQPQGNTLAIATPSGQVRNIRSSQRPG ECCCCCCEEEEEEECCCEEEEEECCHHHHCCEEECCCCCEEEEECCCCHHHCCCCCCCCC TPLVPSLPATRIVVDLNRPTPWQVRQGQPIRPPVDPNTPDAKPPASTHREWTIVLEGIAD CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCC EGLIQRYTPLPIAPPPASDPNLLKQLPTPEPLITKVEVVNNQTLIRLRVPLALSPKVSTI CCHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCEEEEEEECEEECCCCCCC NNPDRLIIDLRPDPLEPRDITWATGLRWRQQFVNLGTNRFPVVLLEVNPRTIGLTLKPIV CCCCEEEEEECCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEEEEEEE TNPDTLVGTAPILQTAQRYFAVGAINGGYFNRNNRYPLGAIRQNNQWLSSPILNRGAIAW CCCCCEEECHHHHHHHHHEEEEEEECCCEECCCCCCCCCEEECCCCCHHCCCCCCCCEEE NDAGQFYFGRLSLQETLATSSNLRVPILALNSGYVQNGIARYTPAWGKMYTPLTDNERIV CCCCCEEEEEEEHHHHHHCCCCCEEEEEEECCCHHHCCHHHCCCCCCCEECCCCCCCEEE IVQNNKITNQFPGNKAGQTNFPIPNNGYLLTLRGNATTVASQLPVGTDVQITSATTPGEF EEECCEECCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEHHHCCCCCCEEEEECCCCCCC NRYPHIIGAGPLLLQNSQIVLDAKSEQFSNAFIAERAVRSGICTTANNTLLIAAVHNRAG CCCCEEEECCCEEEECCEEEEEECCCHHHHHHHHHHHHHCCCEEECCCEEEEEEEECCCC GPGPNLAEHAQLMKLLGCVNALNLDGGSSTSLYLSGQLLDRYPNTAARVHNGIGIFLRPK CCCCCHHHHHHHHHHHHHHHEEECCCCCCEEEEEECHHHHHCCCHHHHHCCCEEEEEECC >Mature Secondary Structure MDKMTNYCRRKNHNIVTKPLRYSFLPAIVSSLTAISLCLTAAYATTAQQPQKVGQAAPRS CCHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCC TPPASVRLSSGSQISLNGRTLPGAWLQQPGAILISDGALRQLIGIDLLSSNNPARQPVVW CCCCEEEECCCCEEEECCCCCCCHHHCCCCEEEEECCHHHHHHCEEEECCCCCCCCCEEE FSSTTQPLVLATKLQGGYRYLDITNFAQIAGWQIQPQGNTLAIATPSGQVRNIRSSQRPG ECCCCCCEEEEEEECCCEEEEEECCHHHHCCEEECCCCCEEEEECCCCHHHCCCCCCCCC TPLVPSLPATRIVVDLNRPTPWQVRQGQPIRPPVDPNTPDAKPPASTHREWTIVLEGIAD CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCC EGLIQRYTPLPIAPPPASDPNLLKQLPTPEPLITKVEVVNNQTLIRLRVPLALSPKVSTI CCHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCEEEEEEECEEECCCCCCC NNPDRLIIDLRPDPLEPRDITWATGLRWRQQFVNLGTNRFPVVLLEVNPRTIGLTLKPIV CCCCEEEEEECCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEEEEEEE TNPDTLVGTAPILQTAQRYFAVGAINGGYFNRNNRYPLGAIRQNNQWLSSPILNRGAIAW CCCCCEEECHHHHHHHHHEEEEEEECCCEECCCCCCCCCEEECCCCCHHCCCCCCCCEEE NDAGQFYFGRLSLQETLATSSNLRVPILALNSGYVQNGIARYTPAWGKMYTPLTDNERIV CCCCCEEEEEEEHHHHHHCCCCCEEEEEEECCCHHHCCHHHCCCCCCCEECCCCCCCEEE IVQNNKITNQFPGNKAGQTNFPIPNNGYLLTLRGNATTVASQLPVGTDVQITSATTPGEF EEECCEECCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEHHHCCCCCCEEEEECCCCCCC NRYPHIIGAGPLLLQNSQIVLDAKSEQFSNAFIAERAVRSGICTTANNTLLIAAVHNRAG CCCCEEEECCCEEEECCEEEEEECCCHHHHHHHHHHHHHCCCEEECCCEEEEEEEECCCC GPGPNLAEHAQLMKLLGCVNALNLDGGSSTSLYLSGQLLDRYPNTAARVHNGIGIFLRPK CCCCCHHHHHHHHHHHHHHHEEECCCCCCEEEEEECHHHHHCCCHHHHHCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA