| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is 17231790
Identifier: 17231790
GI number: 17231790
Start: 5153317
End: 5154786
Strand: Reverse
Name: 17231790
Synonym: all4298
Alternate gene names: NA
Gene position: 5154786-5153317 (Counterclockwise)
Preceding gene: 17231791
Following gene: 17231789
Centisome position: 80.37
GC content: 35.99
Gene sequence:
>1470_bases ATGAACCAGCTGTTTTCAATTCCAACAGCGCTGTGTTTACCTGCCCCTGAGATTGAAGCTTTAATACAGGGGCGGACAAT AGCAGCTATGCCTAAGATGTTTATTCGTCCTGGGCAGAAATTTTTACTTTATCCTGCTGATATCTCAATTGATACCCTTT CAATCGAGCAATACTATCGTGCAAATTTATTATCCGTCGCCAGAACTAATATTCAACAACATTCTTCTCAAACTGTGTTT ATTAAAGCTTGGGCAAGATGTGAACTTTGCCAAGTTATAGATAAGACTAAACCTTTAAATGTTTTGTCTCAATTAACAAT ATGGACACCTAAAGCATTTGAAGCAATCATACAGAAACAAGAGAATATTTTTCTGGTTTACCTGCGTGTTTACCATTTAC CCCAGGAGTGTAAAGTTACTGTTGATGCCAATATTCAAGAAAAATTCGGTAAATTCGTAAGTTTACCTAACATCGCTGGT TCTGAAGATAAACCAATTTTAAAAGATAGCATCTTCGAACGACGCAAACAACAACTAGAAAAAATAGAACCCCCACAGCA TCCAGAATTAGATGAATTACAGAGTTTTCTAGCCCCACTTGCAATCAGTAACCCAGGAGCTAAAGAATTAGACGATGATA TTCAAATATTTTTAGGTTGGAAGAATACTAAGCAGATTCAAACACTAAATACAGATTTAGCTTGGATAAATGACATTGCT AAGTTAGGCGATCGTAGCATAGAGCTGGACGAGAAAAAAAGCAATTACCAAGCTGGTACAGACTTTGAAAATATTACACG TCAAAGTCTAGAATTTTTAGGATTTAAGGTTGAATATGCTTATAAAGGTGGTGCTGGAGGCTTAGATTTATTCTGTTCAC AACCTTACCCTTTGGTTTGCGAATGTAAAGCAGGTAAAAGTATTCCCGATCGTGCAGTAGAAGAATTAGATAGGATTGGC AAAAGACATCTTAAAGAAAATTACCTTCAAGCAGTAAAATTAATTATTGGCCCAGGTCAACCTACTAAAAACCTGAAAGA CTCTGCTGAAATATCTAAAATCAGTATTATAAATGTAATGACTTTACAAAAACTAGTTGAACTCAAAGTCAAATATCCCG GTGCTATCAACTTAATTGAATTGCGAAAGTATCTAAAACCTGGACAGATTGACTATAAAATTAATGAATATATTGATAAA GTTGAACAAGCTATCAAGTTGCGATCGCATATTATTCAGCTTGTTAACAATTATCTAGAAAATTCAGGGACAGAATCTGC TGGTGCCGAAGCTCTACATGGTGCTTATTTCGCCTCACATCCACCACAACCACTAAAAACAGAGGAAATGCACGAGATTT TGATAGAACTTTCATCACCTTTAACAGGCTATTTAGGCAGAGTTAAAGGTAATGATTGGAGGAGCGATCGCTTTTACTAC CTCCGCGATTTAACAATAAGCTCAAAGTAA
Upstream 100 bases:
>100_bases CAAGAACCGACTAATTTAACTGATGATGGATTACCTATTAGTATTCCTCAAAGCTTTGCGACTAGCGACCATATCGACCT CACCCTATAGCTAAATAGAA
Downstream 100 bases:
>100_bases GTACTGCATATTTATTTTACCTGTGTGTCCCTGTGGTTAATTCTCTACTACAGGGATATTTAGCATATACAGATAAATTT CATCTAATAATCAAGAATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MNQLFSIPTALCLPAPEIEALIQGRTIAAMPKMFIRPGQKFLLYPADISIDTLSIEQYYRANLLSVARTNIQQHSSQTVF IKAWARCELCQVIDKTKPLNVLSQLTIWTPKAFEAIIQKQENIFLVYLRVYHLPQECKVTVDANIQEKFGKFVSLPNIAG SEDKPILKDSIFERRKQQLEKIEPPQHPELDELQSFLAPLAISNPGAKELDDDIQIFLGWKNTKQIQTLNTDLAWINDIA KLGDRSIELDEKKSNYQAGTDFENITRQSLEFLGFKVEYAYKGGAGGLDLFCSQPYPLVCECKAGKSIPDRAVEELDRIG KRHLKENYLQAVKLIIGPGQPTKNLKDSAEISKISIINVMTLQKLVELKVKYPGAINLIELRKYLKPGQIDYKINEYIDK VEQAIKLRSHIIQLVNNYLENSGTESAGAEALHGAYFASHPPQPLKTEEMHEILIELSSPLTGYLGRVKGNDWRSDRFYY LRDLTISSK
Sequences:
>Translated_489_residues MNQLFSIPTALCLPAPEIEALIQGRTIAAMPKMFIRPGQKFLLYPADISIDTLSIEQYYRANLLSVARTNIQQHSSQTVF IKAWARCELCQVIDKTKPLNVLSQLTIWTPKAFEAIIQKQENIFLVYLRVYHLPQECKVTVDANIQEKFGKFVSLPNIAG SEDKPILKDSIFERRKQQLEKIEPPQHPELDELQSFLAPLAISNPGAKELDDDIQIFLGWKNTKQIQTLNTDLAWINDIA KLGDRSIELDEKKSNYQAGTDFENITRQSLEFLGFKVEYAYKGGAGGLDLFCSQPYPLVCECKAGKSIPDRAVEELDRIG KRHLKENYLQAVKLIIGPGQPTKNLKDSAEISKISIINVMTLQKLVELKVKYPGAINLIELRKYLKPGQIDYKINEYIDK VEQAIKLRSHIIQLVNNYLENSGTESAGAEALHGAYFASHPPQPLKTEEMHEILIELSSPLTGYLGRVKGNDWRSDRFYY LRDLTISSK >Mature_489_residues MNQLFSIPTALCLPAPEIEALIQGRTIAAMPKMFIRPGQKFLLYPADISIDTLSIEQYYRANLLSVARTNIQQHSSQTVF IKAWARCELCQVIDKTKPLNVLSQLTIWTPKAFEAIIQKQENIFLVYLRVYHLPQECKVTVDANIQEKFGKFVSLPNIAG SEDKPILKDSIFERRKQQLEKIEPPQHPELDELQSFLAPLAISNPGAKELDDDIQIFLGWKNTKQIQTLNTDLAWINDIA KLGDRSIELDEKKSNYQAGTDFENITRQSLEFLGFKVEYAYKGGAGGLDLFCSQPYPLVCECKAGKSIPDRAVEELDRIG KRHLKENYLQAVKLIIGPGQPTKNLKDSAEISKISIINVMTLQKLVELKVKYPGAINLIELRKYLKPGQIDYKINEYIDK VEQAIKLRSHIIQLVNNYLENSGTESAGAEALHGAYFASHPPQPLKTEEMHEILIELSSPLTGYLGRVKGNDWRSDRFYY LRDLTISSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55495; Mature: 55495
Theoretical pI: Translated: 7.49; Mature: 7.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQLFSIPTALCLPAPEIEALIQGRTIAAMPKMFIRPGQKFLLYPADISIDTLSIEQYYR CCCCCCCCHHHHCCCHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCCCEEEEEHHHHHH ANLLSVARTNIQQHSSQTVFIKAWARCELCQVIDKTKPLNVLSQLTIWTPKAFEAIIQKQ HHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHCC ENIFLVYLRVYHLPQECKVTVDANIQEKFGKFVSLPNIAGSEDKPILKDSIFERRKQQLE CCEEEEEEEEHHCCHHHEEEECCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH KIEPPQHPELDELQSFLAPLAISNPGAKELDDDIQIFLGWKNTKQIQTLNTDLAWINDIA HCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEECCCHHHHHHHHH KLGDRSIELDEKKSNYQAGTDFENITRQSLEFLGFKVEYAYKGGAGGLDLFCSQPYPLVC HHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCCEEEECCCCCEEE ECKAGKSIPDRAVEELDRIGKRHLKENYLQAVKLIIGPGQPTKNLKDSAEISKISIINVM ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH TLQKLVELKVKYPGAINLIELRKYLKPGQIDYKINEYIDKVEQAIKLRSHIIQLVNNYLE HHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH NSGTESAGAEALHGAYFASHPPQPLKTEEMHEILIELSSPLTGYLGRVKGNDWRSDRFYY CCCCCCCCHHHHHCCHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCEEE LRDLTISSK EEEEEECCC >Mature Secondary Structure MNQLFSIPTALCLPAPEIEALIQGRTIAAMPKMFIRPGQKFLLYPADISIDTLSIEQYYR CCCCCCCCHHHHCCCHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCCCEEEEEHHHHHH ANLLSVARTNIQQHSSQTVFIKAWARCELCQVIDKTKPLNVLSQLTIWTPKAFEAIIQKQ HHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHCC ENIFLVYLRVYHLPQECKVTVDANIQEKFGKFVSLPNIAGSEDKPILKDSIFERRKQQLE CCEEEEEEEEHHCCHHHEEEECCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH KIEPPQHPELDELQSFLAPLAISNPGAKELDDDIQIFLGWKNTKQIQTLNTDLAWINDIA HCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEECCCHHHHHHHHH KLGDRSIELDEKKSNYQAGTDFENITRQSLEFLGFKVEYAYKGGAGGLDLFCSQPYPLVC HHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCCEEEECCCCCEEE ECKAGKSIPDRAVEELDRIGKRHLKENYLQAVKLIIGPGQPTKNLKDSAEISKISIINVM ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH TLQKLVELKVKYPGAINLIELRKYLKPGQIDYKINEYIDKVEQAIKLRSHIIQLVNNYLE HHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH NSGTESAGAEALHGAYFASHPPQPLKTEEMHEILIELSSPLTGYLGRVKGNDWRSDRFYY CCCCCCCCHHHHHCCHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCEEE LRDLTISSK EEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA