BacMap

Definition	Nostoc sp. PCC 7120, complete genome.
Accession	NC_003272
Length	6,413,771

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The map label for this gene is hflB [C]

Identifier: 17231788

GI number: 17231788

Start: 5150548

End: 5152059

Strand: Reverse

Name: hflB [C]

Synonym: all4296

Alternate gene names: 17231788

Gene position: 5152059-5150548 (Counterclockwise)

Preceding gene: 17231789

Following gene: 17231787

Centisome position: 80.33

GC content: 46.3

Gene sequence:

>1512_bases
ATGAACTTCCGTGAAGAGTTTAAACTGCTACTGAGAGCGCGTTATCCGTTAATTTACATACCTACCTATGAAGAAGAACG
GGTAGAAACCGCTATCCGCGAAGAAGCAGCCAATCAAGGTAATCGCCCAGTATATACCTGGGATTTTGTCGATGGGTATC
AAGGTAACCCCAATGACGCGGGTTTTGGGCGGCGTAATCCCCTGCAAGCTTTAGAATTTTTAGAAAAAATACCAGCATCA
GCACCAGCAGTAATTATTCTGCGAGATTATCATCGATTTTTAGATGATGTAGCGATCGCTCGCAAACTCCGCAACCTAGC
CAGACTGCTGAAGTCACAACCGAAAAACATCGTCCTATTGTCGCCACGCATCGCCATACCTGACGATTTAACTGAAATTT
TAACGGTTGTCGAGTTCCCCTTACCTAACGCTCCAGAAATTAAAATAGAGATTGAACGTCTACTGCAAGCAACTGGTAAT
TCCCTCTCTGGGAAAGTTACAGATGATTTGGTGCGTTCTTGCCAAGGGCTATCGATGGAAAGGATTCGGCGGGTTTTAGC
GAAAGCGATCGCTACCCACGGAGAATTGCAACCAGAAGACGTAGATTTAGTTTTGGAGGAAAAGCGCCAAACTATCCGCC
AAACCCAAATCCTCGACTTTTACCCCGCCACAGAGCAGATTTCTGACATAGGAGGACTAGATAACCTCAAAGATTGGCTA
TTACGCCGTGGTGGTTCCTTTAGTGAACGCGCCCGCCAATATGGATTACCACACCCACGGGGTTTATTATTAGTGGGGAT
TCAAGGTACTGGTAAATCCTTAACCGCAAAAGCGATCGCTCATCATTGGCATTTACCCCTACTACGCCTAGATGTGGGAC
GATTATTTGGCGGTTTGGTGGGTGAATCAGAATCCCGTACCCGGCAAATGATTCAAGTAGCAGAAGCCCTCGCACCCTGT
ATTCTCTGGATTGATGAAATCGATAAAGCCTTTTCTGGACTGGGTAGTAAAGGTGATGCGGGAACTACTAGCCGCGTCTT
CGGCACATTTATTACTTGGCTAGCCGAAAAAACTTCCCCAGTGTTCGTTGTCGCCACCGCCAATAACATCCAAGCCCTAC
CGCCAGAAATGTTGCGGAAAGGGCGGTTTGACGAAATTTTCTTTGTTGGTTTACCCAGTCAAGAAGAAAGAAAAGCCATT
TTTAATGTTCATTTATCCCGACTGCGCCCCCACAATTTGAAAAATTATGACATTGAGCGATTAGCGTACGAAACGCCAGA
TTTTTCAGGGGCAGAAATCGAGCAAACTTTAATAGAAGCGATGCACATCGGCTTTAGTCAAAACCGAGATTTCACTACCG
ACGATGTTTTAGAAGCGGCTAGTCAAATCATACCCCTAGCCAGAACGGCTGTAGAGCAGATTCAGGAACTACAAGAATGG
GCAGCAGCCGGGAGAGCGCGTCTAGCCTCAAAACAAAGTCCTTTGAGTGACACATTCGGCAAGCTACGCTAA

Upstream 100 bases:

>100_bases
CCCAATACCCCACTCCGTACTAGATCGCATGATCAAATGGGATTTTGGTTAAAGAAAGTTGTACATTGCCATCAAGAGCA
ACTAACCATAACCCCTAGAT

Downstream 100 bases:

>100_bases
CAATTACAGTGTAAGTTGCCATAATTATTCCTAAGTCAATAGTCTAGAGTCAAAAACTGTTGACTATTGACTATTGACCA
TTCACCATTGACTATTGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 503; Mature: 503

Protein sequence:

>503_residues
MNFREEFKLLLRARYPLIYIPTYEEERVETAIREEAANQGNRPVYTWDFVDGYQGNPNDAGFGRRNPLQALEFLEKIPAS
APAVIILRDYHRFLDDVAIARKLRNLARLLKSQPKNIVLLSPRIAIPDDLTEILTVVEFPLPNAPEIKIEIERLLQATGN
SLSGKVTDDLVRSCQGLSMERIRRVLAKAIATHGELQPEDVDLVLEEKRQTIRQTQILDFYPATEQISDIGGLDNLKDWL
LRRGGSFSERARQYGLPHPRGLLLVGIQGTGKSLTAKAIAHHWHLPLLRLDVGRLFGGLVGESESRTRQMIQVAEALAPC
ILWIDEIDKAFSGLGSKGDAGTTSRVFGTFITWLAEKTSPVFVVATANNIQALPPEMLRKGRFDEIFFVGLPSQEERKAI
FNVHLSRLRPHNLKNYDIERLAYETPDFSGAEIEQTLIEAMHIGFSQNRDFTTDDVLEAASQIIPLARTAVEQIQELQEW
AAAGRARLASKQSPLSDTFGKLR

Sequences:

>Translated_503_residues
MNFREEFKLLLRARYPLIYIPTYEEERVETAIREEAANQGNRPVYTWDFVDGYQGNPNDAGFGRRNPLQALEFLEKIPAS
APAVIILRDYHRFLDDVAIARKLRNLARLLKSQPKNIVLLSPRIAIPDDLTEILTVVEFPLPNAPEIKIEIERLLQATGN
SLSGKVTDDLVRSCQGLSMERIRRVLAKAIATHGELQPEDVDLVLEEKRQTIRQTQILDFYPATEQISDIGGLDNLKDWL
LRRGGSFSERARQYGLPHPRGLLLVGIQGTGKSLTAKAIAHHWHLPLLRLDVGRLFGGLVGESESRTRQMIQVAEALAPC
ILWIDEIDKAFSGLGSKGDAGTTSRVFGTFITWLAEKTSPVFVVATANNIQALPPEMLRKGRFDEIFFVGLPSQEERKAI
FNVHLSRLRPHNLKNYDIERLAYETPDFSGAEIEQTLIEAMHIGFSQNRDFTTDDVLEAASQIIPLARTAVEQIQELQEW
AAAGRARLASKQSPLSDTFGKLR
>Mature_503_residues
MNFREEFKLLLRARYPLIYIPTYEEERVETAIREEAANQGNRPVYTWDFVDGYQGNPNDAGFGRRNPLQALEFLEKIPAS
APAVIILRDYHRFLDDVAIARKLRNLARLLKSQPKNIVLLSPRIAIPDDLTEILTVVEFPLPNAPEIKIEIERLLQATGN
SLSGKVTDDLVRSCQGLSMERIRRVLAKAIATHGELQPEDVDLVLEEKRQTIRQTQILDFYPATEQISDIGGLDNLKDWL
LRRGGSFSERARQYGLPHPRGLLLVGIQGTGKSLTAKAIAHHWHLPLLRLDVGRLFGGLVGESESRTRQMIQVAEALAPC
ILWIDEIDKAFSGLGSKGDAGTTSRVFGTFITWLAEKTSPVFVVATANNIQALPPEMLRKGRFDEIFFVGLPSQEERKAI
FNVHLSRLRPHNLKNYDIERLAYETPDFSGAEIEQTLIEAMHIGFSQNRDFTTDDVLEAASQIIPLARTAVEQIQELQEW
AAAGRARLASKQSPLSDTFGKLR

Specific function: Seems To Act As An ATP-Dependent Zinc Metallopeptidase. Involved In The Degradation Of Sigma-32. Degrades Carboxy- Terminal-Tagged Cytoplasmic Proteins. These Proteins Are Tagged With An 11-Amino-Acid Nonpolar Destabilizing Tail VIa A Mechanism Involving

COG id: COG0464

COG function: function code O; ATPases of the AAA+ class

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AAA ATPase family. CDC48 subfamily [H]

Homologues:

Organism=Homo sapiens, GI157671927, Length=342, Percent_Identity=29.2397660818713, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI300192933, Length=219, Percent_Identity=35.6164383561644, Blast_Score=108, Evalue=2e-23,
Organism=Homo sapiens, GI45643125, Length=250, Percent_Identity=31.2, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI45643123, Length=250, Percent_Identity=31.2, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI4507173, Length=197, Percent_Identity=34.5177664974619, Blast_Score=102, Evalue=6e-22,
Organism=Homo sapiens, GI21361144, Length=248, Percent_Identity=29.8387096774194, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI24430151, Length=249, Percent_Identity=28.9156626506024, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI6005942, Length=341, Percent_Identity=25.8064516129032, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI24497435, Length=215, Percent_Identity=31.1627906976744, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI4506209, Length=222, Percent_Identity=29.7297297297297, Blast_Score=92, Evalue=8e-19,
Organism=Homo sapiens, GI310125280, Length=225, Percent_Identity=31.1111111111111, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI194018488, Length=306, Percent_Identity=29.4117647058824, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI310125282, Length=225, Percent_Identity=31.1111111111111, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI156564401, Length=225, Percent_Identity=31.1111111111111, Blast_Score=89, Evalue=9e-18,
Organism=Homo sapiens, GI229577436, Length=267, Percent_Identity=28.0898876404494, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI195539395, Length=250, Percent_Identity=25.6, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI24430155, Length=232, Percent_Identity=28.448275862069, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI5729991, Length=232, Percent_Identity=28.448275862069, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI89064750, Length=232, Percent_Identity=28.448275862069, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI24497618, Length=201, Percent_Identity=28.3582089552239, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI4505725, Length=222, Percent_Identity=30.1801801801802, Blast_Score=83, Evalue=7e-16,
Organism=Homo sapiens, GI153792536, Length=200, Percent_Identity=28, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI7019569, Length=177, Percent_Identity=30.5084745762712, Blast_Score=79, Evalue=9e-15,
Organism=Homo sapiens, GI7657689, Length=187, Percent_Identity=32.0855614973262, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI21327685, Length=187, Percent_Identity=32.0855614973262, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI31742536, Length=257, Percent_Identity=28.0155642023346, Blast_Score=76, Evalue=8e-14,
Organism=Homo sapiens, GI112789543, Length=257, Percent_Identity=28.0155642023346, Blast_Score=76, Evalue=8e-14,
Organism=Homo sapiens, GI226371754, Length=284, Percent_Identity=28.169014084507, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI17865802, Length=185, Percent_Identity=29.7297297297297, Blast_Score=73, Evalue=7e-13,
Organism=Homo sapiens, GI31377644, Length=224, Percent_Identity=29.9107142857143, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI5901990, Length=195, Percent_Identity=27.6923076923077, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI11875211, Length=184, Percent_Identity=30.4347826086957, Blast_Score=67, Evalue=5e-11,
Organism=Homo sapiens, GI40806170, Length=184, Percent_Identity=30.4347826086957, Blast_Score=67, Evalue=5e-11,
Organism=Escherichia coli, GI1789568, Length=284, Percent_Identity=31.3380281690141, Blast_Score=106, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17508053, Length=364, Percent_Identity=28.5714285714286, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17532375, Length=228, Percent_Identity=32.8947368421053, Blast_Score=109, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI71994521, Length=228, Percent_Identity=34.6491228070175, Blast_Score=106, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17554786, Length=214, Percent_Identity=30.3738317757009, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI25144278, Length=210, Percent_Identity=29.5238095238095, Blast_Score=100, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI25144281, Length=210, Percent_Identity=29.5238095238095, Blast_Score=100, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17531535, Length=231, Percent_Identity=31.6017316017316, Blast_Score=99, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17508701, Length=232, Percent_Identity=28.8793103448276, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71987372, Length=217, Percent_Identity=28.110599078341, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI71987364, Length=217, Percent_Identity=28.110599078341, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI25153574, Length=435, Percent_Identity=23.6781609195402, Blast_Score=95, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI17563250, Length=236, Percent_Identity=28.8135593220339, Blast_Score=95, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI115534323, Length=259, Percent_Identity=28.5714285714286, Blast_Score=95, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI193209502, Length=223, Percent_Identity=29.1479820627803, Blast_Score=92, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI17554264, Length=194, Percent_Identity=32.9896907216495, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17505546, Length=256, Percent_Identity=29.296875, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17563248, Length=221, Percent_Identity=28.5067873303167, Blast_Score=89, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17537217, Length=221, Percent_Identity=30.7692307692308, Blast_Score=88, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI133901662, Length=228, Percent_Identity=32.4561403508772, Blast_Score=87, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI133901658, Length=228, Percent_Identity=32.4561403508772, Blast_Score=87, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17562804, Length=165, Percent_Identity=31.5151515151515, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI193206114, Length=206, Percent_Identity=26.6990291262136, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI133931034, Length=206, Percent_Identity=26.6990291262136, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI25146157, Length=198, Percent_Identity=30.3030303030303, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI193206116, Length=206, Percent_Identity=26.6990291262136, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17554784, Length=241, Percent_Identity=27.3858921161826, Blast_Score=74, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17560432, Length=185, Percent_Identity=28.6486486486486, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17508421, Length=185, Percent_Identity=32.4324324324324, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI32563584, Length=185, Percent_Identity=32.4324324324324, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17541224, Length=194, Percent_Identity=28.3505154639175, Blast_Score=70, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17541226, Length=194, Percent_Identity=28.3505154639175, Blast_Score=70, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6320077, Length=330, Percent_Identity=28.7878787878788, Blast_Score=102, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6322994, Length=249, Percent_Identity=28.9156626506024, Blast_Score=99, Evalue=1e-21,
Organism=Saccharomyces cerevisiae, GI6323736, Length=237, Percent_Identity=34.1772151898734, Blast_Score=98, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6324691, Length=256, Percent_Identity=28.515625, Blast_Score=98, Evalue=3e-21,
Organism=Saccharomyces cerevisiae, GI6320197, Length=274, Percent_Identity=28.4671532846715, Blast_Score=98, Evalue=4e-21,
Organism=Saccharomyces cerevisiae, GI6324000, Length=263, Percent_Identity=29.277566539924, Blast_Score=96, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6320854, Length=248, Percent_Identity=31.0483870967742, Blast_Score=93, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6321390, Length=212, Percent_Identity=28.3018867924528, Blast_Score=91, Evalue=4e-19,
Organism=Saccharomyces cerevisiae, GI6323429, Length=283, Percent_Identity=27.208480565371, Blast_Score=91, Evalue=5e-19,
Organism=Saccharomyces cerevisiae, GI6319554, Length=225, Percent_Identity=29.7777777777778, Blast_Score=88, Evalue=4e-18,
Organism=Saccharomyces cerevisiae, GI6322704, Length=223, Percent_Identity=29.5964125560538, Blast_Score=87, Evalue=4e-18,
Organism=Saccharomyces cerevisiae, GI6324833, Length=217, Percent_Identity=26.7281105990783, Blast_Score=87, Evalue=7e-18,
Organism=Saccharomyces cerevisiae, GI6322651, Length=218, Percent_Identity=29.3577981651376, Blast_Score=86, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6320602, Length=247, Percent_Identity=29.1497975708502, Blast_Score=83, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6321709, Length=227, Percent_Identity=27.3127753303965, Blast_Score=82, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6325281, Length=247, Percent_Identity=26.3157894736842, Blast_Score=80, Evalue=7e-16,
Organism=Saccharomyces cerevisiae, GI6321465, Length=187, Percent_Identity=29.9465240641711, Blast_Score=77, Evalue=7e-15,
Organism=Saccharomyces cerevisiae, GI6320887, Length=289, Percent_Identity=24.2214532871972, Blast_Score=75, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6325183, Length=261, Percent_Identity=28.735632183908, Blast_Score=75, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6325431, Length=183, Percent_Identity=27.8688524590164, Blast_Score=67, Evalue=7e-12,
Organism=Drosophila melanogaster, GI45552965, Length=239, Percent_Identity=30.1255230125523, Blast_Score=109, Evalue=5e-24,
Organism=Drosophila melanogaster, GI24660075, Length=239, Percent_Identity=30.1255230125523, Blast_Score=109, Evalue=6e-24,
Organism=Drosophila melanogaster, GI281365776, Length=239, Percent_Identity=30.1255230125523, Blast_Score=108, Evalue=6e-24,
Organism=Drosophila melanogaster, GI24665814, Length=213, Percent_Identity=34.7417840375587, Blast_Score=108, Evalue=7e-24,
Organism=Drosophila melanogaster, GI28574878, Length=213, Percent_Identity=34.7417840375587, Blast_Score=108, Evalue=7e-24,
Organism=Drosophila melanogaster, GI24639391, Length=225, Percent_Identity=31.5555555555556, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI17137560, Length=229, Percent_Identity=31.8777292576419, Blast_Score=105, Evalue=6e-23,
Organism=Drosophila melanogaster, GI161076486, Length=229, Percent_Identity=31.8777292576419, Blast_Score=105, Evalue=6e-23,
Organism=Drosophila melanogaster, GI161076488, Length=229, Percent_Identity=31.8777292576419, Blast_Score=105, Evalue=7e-23,
Organism=Drosophila melanogaster, GI19921202, Length=273, Percent_Identity=32.6007326007326, Blast_Score=105, Evalue=1e-22,
Organism=Drosophila melanogaster, GI17738151, Length=252, Percent_Identity=29.7619047619048, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI281363136, Length=179, Percent_Identity=36.3128491620112, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI78707192, Length=179, Percent_Identity=36.3128491620112, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24656825, Length=449, Percent_Identity=23.3853006681514, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI19920408, Length=212, Percent_Identity=31.6037735849057, Blast_Score=100, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24656820, Length=432, Percent_Identity=22.9166666666667, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24652279, Length=194, Percent_Identity=33.5051546391753, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24649446, Length=251, Percent_Identity=27.8884462151394, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24651451, Length=213, Percent_Identity=31.4553990610329, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI17137738, Length=222, Percent_Identity=29.7297297297297, Blast_Score=96, Evalue=6e-20,
Organism=Drosophila melanogaster, GI17864540, Length=277, Percent_Identity=28.8808664259928, Blast_Score=92, Evalue=8e-19,
Organism=Drosophila melanogaster, GI18860063, Length=232, Percent_Identity=28.8793103448276, Blast_Score=92, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24658770, Length=258, Percent_Identity=27.1317829457364, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI28573010, Length=277, Percent_Identity=28.5198555956679, Blast_Score=89, Evalue=6e-18,
Organism=Drosophila melanogaster, GI281361487, Length=231, Percent_Identity=27.7056277056277, Blast_Score=89, Evalue=9e-18,
Organism=Drosophila melanogaster, GI24640100, Length=214, Percent_Identity=26.1682242990654, Blast_Score=86, Evalue=5e-17,
Organism=Drosophila melanogaster, GI21355121, Length=182, Percent_Identity=30.7692307692308, Blast_Score=83, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24663015, Length=214, Percent_Identity=27.5700934579439, Blast_Score=82, Evalue=6e-16,
Organism=Drosophila melanogaster, GI24644145, Length=197, Percent_Identity=29.4416243654822, Blast_Score=82, Evalue=9e-16,
Organism=Drosophila melanogaster, GI20129423, Length=180, Percent_Identity=31.6666666666667, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24581396, Length=227, Percent_Identity=31.7180616740088, Blast_Score=80, Evalue=4e-15,
Organism=Drosophila melanogaster, GI20129529, Length=232, Percent_Identity=29.3103448275862, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI18859657, Length=223, Percent_Identity=29.1479820627803, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI281360142, Length=248, Percent_Identity=26.2096774193548, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI21357333, Length=248, Percent_Identity=26.2096774193548, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI281360146, Length=248, Percent_Identity=26.2096774193548, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI281360138, Length=248, Percent_Identity=26.2096774193548, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI281360136, Length=248, Percent_Identity=26.2096774193548, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24644411, Length=248, Percent_Identity=26.2096774193548, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI281360144, Length=248, Percent_Identity=26.2096774193548, Blast_Score=66, Evalue=5e-11,
Organism=Drosophila melanogaster, GI281360140, Length=248, Percent_Identity=26.2096774193548, Blast_Score=66, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR003593
- InterPro:   IPR005938
- InterPro:   IPR003959
- InterPro:   IPR003960
- InterPro:   IPR003338
- InterPro:   IPR004201
- InterPro:   IPR015415 [H]

Pfam domain/function: PF00004 AAA; PF02933 CDC48_2; PF02359 CDC48_N; PF09336 Vps4_C [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 56590; Mature: 56590

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFREEFKLLLRARYPLIYIPTYEEERVETAIREEAANQGNRPVYTWDFVDGYQGNPNDA
CCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCC
GFGRRNPLQALEFLEKIPASAPAVIILRDYHRFLDDVAIARKLRNLARLLKSQPKNIVLL
CCCCCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
SPRIAIPDDLTEILTVVEFPLPNAPEIKIEIERLLQATGNSLSGKVTDDLVRSCQGLSME
CCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHH
RIRRVLAKAIATHGELQPEDVDLVLEEKRQTIRQTQILDFYPATEQISDIGGLDNLKDWL
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHH
LRRGGSFSERARQYGLPHPRGLLLVGIQGTGKSLTAKAIAHHWHLPLLRLDVGRLFGGLV
HHCCCCHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHC
GESESRTRQMIQVAEALAPCILWIDEIDKAFSGLGSKGDAGTTSRVFGTFITWLAEKTSP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCC
VFVVATANNIQALPPEMLRKGRFDEIFFVGLPSQEERKAIFNVHLSRLRPHNLKNYDIER
EEEEEECCCCCCCCHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCHHH
LAYETPDFSGAEIEQTLIEAMHIGFSQNRDFTTDDVLEAASQIIPLARTAVEQIQELQEW
HHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAAGRARLASKQSPLSDTFGKLR
HHHHHHHHHHCCCCCHHHHHCCC
>Mature Secondary Structure
MNFREEFKLLLRARYPLIYIPTYEEERVETAIREEAANQGNRPVYTWDFVDGYQGNPNDA
CCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCC
GFGRRNPLQALEFLEKIPASAPAVIILRDYHRFLDDVAIARKLRNLARLLKSQPKNIVLL
CCCCCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
SPRIAIPDDLTEILTVVEFPLPNAPEIKIEIERLLQATGNSLSGKVTDDLVRSCQGLSME
CCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHH
RIRRVLAKAIATHGELQPEDVDLVLEEKRQTIRQTQILDFYPATEQISDIGGLDNLKDWL
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHH
LRRGGSFSERARQYGLPHPRGLLLVGIQGTGKSLTAKAIAHHWHLPLLRLDVGRLFGGLV
HHCCCCHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHC
GESESRTRQMIQVAEALAPCILWIDEIDKAFSGLGSKGDAGTTSRVFGTFITWLAEKTSP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCC
VFVVATANNIQALPPEMLRKGRFDEIFFVGLPSQEERKAIFNVHLSRLRPHNLKNYDIER
EEEEEECCCCCCCCHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCHHH
LAYETPDFSGAEIEQTLIEAMHIGFSQNRDFTTDDVLEAASQIIPLARTAVEQIQELQEW
HHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAAGRARLASKQSPLSDTFGKLR
HHHHHHHHHHCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Metalloendopeptidases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]