| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231787
Identifier: 17231787
GI number: 17231787
Start: 5149935
End: 5150417
Strand: Reverse
Name: 17231787
Synonym: all4295
Alternate gene names: NA
Gene position: 5150417-5149935 (Counterclockwise)
Preceding gene: 17231788
Following gene: 17231786
Centisome position: 80.3
GC content: 44.1
Gene sequence:
>483_bases ATGTTTTCCGCCTTGCTCAAGTTCATACTAGGAATATTATTAGCGATCGCAGTTTTATTAGGTAGCGGCGTTGCGGTTGG ACTCTATTTCATGAATAGAACCGCCATACCTCCTACCAAGCCTATGTATGCTAATGATACTCCTGCGCTCAAAGACCCCG ATAGCAAAAAGAAGAAGATAGAACCCATCTCCACACCTCAAGCTAAACCTGAGAAAAACCCTACCCCCAGCGCATCCCCC ACAGAAACAGAAAAGCCATTGCCAAAAGGTGCTTATAAGGGGCGTATTACATGGCCTCAAGGCGTAAGCTTGAGGGCTGA ACCAACTCAAGAGGCTGAACGAGTGGGAGGCGCTGGTTTTAACGAAAAAATTGTTGTCTTAGAAGAAAACCCAGATAAAC TTTGGAAAAAGGTTCGAGTTGAAAGCAGCAAAATAGAGGGCTGGACAAAAGTAGGAAATATTGAACGAGTAGATGAAGAA TAA
Upstream 100 bases:
>100_bases CTAAGTCAATAGTCTAGAGTCAAAAACTGTTGACTATTGACTATTGACCATTCACCATTGACTATTGACCATCGATTAAT AACTAATGAGGTTTTAAATT
Downstream 100 bases:
>100_bases TTCAAAACTTCAGAAATTTTACACACTAATAATTAAATCACTGTCAATCATTTTTTAAGGTGCGTTGTCAAATAACGCAA CACAGAAAGGCTAACGCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: SH3 Type 3 Domain Protein; SH3 Domain Protein; Bacterial SH3 Domain Family; SH3 Domain-Containing Protein
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MFSALLKFILGILLAIAVLLGSGVAVGLYFMNRTAIPPTKPMYANDTPALKDPDSKKKKIEPISTPQAKPEKNPTPSASP TETEKPLPKGAYKGRITWPQGVSLRAEPTQEAERVGGAGFNEKIVVLEENPDKLWKKVRVESSKIEGWTKVGNIERVDEE
Sequences:
>Translated_160_residues MFSALLKFILGILLAIAVLLGSGVAVGLYFMNRTAIPPTKPMYANDTPALKDPDSKKKKIEPISTPQAKPEKNPTPSASP TETEKPLPKGAYKGRITWPQGVSLRAEPTQEAERVGGAGFNEKIVVLEENPDKLWKKVRVESSKIEGWTKVGNIERVDEE >Mature_160_residues MFSALLKFILGILLAIAVLLGSGVAVGLYFMNRTAIPPTKPMYANDTPALKDPDSKKKKIEPISTPQAKPEKNPTPSASP TETEKPLPKGAYKGRITWPQGVSLRAEPTQEAERVGGAGFNEKIVVLEENPDKLWKKVRVESSKIEGWTKVGNIERVDEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17524; Mature: 17524
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSALLKFILGILLAIAVLLGSGVAVGLYFMNRTAIPPTKPMYANDTPALKDPDSKKKKI CHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCC EPISTPQAKPEKNPTPSASPTETEKPLPKGAYKGRITWPQGVSLRAEPTQEAERVGGAGF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHCCCCC NEKIVVLEENPDKLWKKVRVESSKIEGWTKVGNIERVDEE CCEEEEEECCHHHHHHHHHHCCHHCCCHHHCCCEECCCCC >Mature Secondary Structure MFSALLKFILGILLAIAVLLGSGVAVGLYFMNRTAIPPTKPMYANDTPALKDPDSKKKKI CHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCC EPISTPQAKPEKNPTPSASPTETEKPLPKGAYKGRITWPQGVSLRAEPTQEAERVGGAGF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHCCCCC NEKIVVLEENPDKLWKKVRVESSKIEGWTKVGNIERVDEE CCEEEEEECCHHHHHHHHHHCCHHCCCHHHCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA