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The map label for this gene is 17231765

Identifier: 17231765

GI number: 17231765

Start: 5123399

End: 5126320

Strand: Direct

Name: 17231765

Synonym: alr4273

Alternate gene names: NA

Gene position: 5123399-5126320 (Clockwise)

Preceding gene: 17231763

Following gene: 17231767

Centisome position: 79.88

GC content: 41.75

Gene sequence:

>2922_bases
GTGTGGGTAATTTGGGCATCTTATATATTACAAGTTATGTTGATCAAAAATCAGATGGGGCAGCCACATAAATCGATAGC
CGCCGAACAACCAATTCTTGCTTTAGGACGTGTTCTACAAATCCTTAGGGAGGAAGATGATGTTGATGTTCTGATTGAAA
CTGCTATTAATTACATTCACAGTGAGTTCAACTACAAGCTGATTTGGATTGCTAGTTACGATCGCCTGAAACACACTTTA
TTTGGTAGAGGGGGTATTGCTCCTGGTAACGACATTAATTTTTTACGCAAACGACTTGTTCTGCAACCAGGGGATTTATT
AGAGCAGGTAGTAATTCAACAGTCACCGTTAGGGGTTGCAGATATCCGCAACGAAAAGCGGGCTGGAGAATGGCGAGAAG
TTGGCACAAAATTTAACATCCAAGGGACAATCATGCTGCCCATGCGTCATAAAAACAGTTGCATGGGATTACTTTTACTC
GGTTCAGAACGTTGGGGTTATTTGCTATCAGAAGATGCTAAAGCTCGTCTGATGATGGTTTTAGGTGAACTAGCAGCCAG
TCTCTATCAACAGGAAATAAATTTGCAGCAGAAGCAAATCAAGCGTCCTGATGAGCCGTTATTACAACTACTAGAAAATA
TCCGTAATCTGAGTAATTTAGAGGAAAGGCTAAAGGCGGTAGTAGAAGCTACCCATAGCTTTGTTTCCCCTAGTCGTACT
AATATTTACTGGTTTGAAAGGCAAGGACGCTATTTTTGGTGTCGGATGGGCGATCAATTAGTCAATATTGGTCGGGAAAC
TAACCGTGAACAGTCAGCCGCAGGTATGACTGTGCAAGACTTAAGTGATTTATATTATGCTTTATCGGTTAATAAAATTA
TTTGGATTGGTGATGCTCGCAGTTCCTTAGAAGGCCAGTTTACCGCTAAATTGTTGCAACGTCTGCGGGTGCGATCGCTC
TTAGCAGCCCCGATTATTTGGCAGAAAGACCTGTTGGGGTTTCTGGCGGTAGAAGGTTATGAACCACGCATTTGGACGGA
AGCTGATAAAAATTTTGTTCAAGGCGCGGCGGGGTTCCTCTCCCTTGTAGCTCCCAATGACAAAATAGAAAATATTGTTA
AACAAATTCAAGAAGATTCCCAGTTAAGTAGTGAAGTTTCTCAAAGTATCTACACTCACCAAGACTGGAAGGAAACTTTA
CGGGTTTGTGCTGCTAAAGTATTACATCGTTTCAATGCTACTCGCTTTTTACTTTTACATTACGACCCCGACCAGAATAA
TTATCAAGTTATTTATCAAACTCAGCCTCACCATCGCCGTCCTCTTAGCTGTAGCTTCGGTTTATTATCGCAGACTGACA
GACAGATGTTGAAATCTGCAAATGCTACAGTAGCAGTGGAAAATGTAGAAGCTGATTTACGGTTTTTTAACTGGCGGCCT
CTCCTATTAGAACACGGTGTGCGATCGCTGTTAATTTGCAATTGCAATCAAGATCAGAAAGCGGAAGTATTATTAGTTGT
CACCCACACCAGCCATCGCAGCTGGACAAACCTAGAAAGGGAACTGCTGTGGGTTGTAAGTCAACAAATAGGGGTAGTTG
TCAGACAGTGGCGACTACAAAAGAATAACGAACAACAGCAACAAGTTCTTCAGAGTATCCAGGAATGTCTACGCATTGTA
GATGGAAGCGAAAACAGCGAAACTGAGAAAAATTATTTGGAATGTGCAGCACTGAGGCAAATTGCATCTGTGCTTAACTG
CCCTTTGGCACTGTTATTGTCTTGGTCACACGGCGAGTCTACAGCAGAAATTATCCCTGGGGTAATTCCCGATAATCAAT
TTGAAGTTGAAATATCAGCCAAACTTTCCATTCAACATGAAGCTGTAATTCAATGGGCGCTGGTTGAGAATAGTTACTTA
AATGTCAGTATAAATCATTTACCTCCAGAAACACGCCAATGGTTACATGGTGAGGGGATCGGGCAAGTTTTATTAATGGC
TTTACGAACTGGATCTGATCATCAACCTACGGGAGTCGTATTGTTAGCAGACCATCGAGAACGTCACTGGCCACAGCATC
GTCTTGATGCTGGCAAAATTTTAATTGATCAGCTTGCTTGGTTGCGTCGTCAACAACAAATTAGTCAACGTCTAGAGTCT
ACAACCCAGGATTTACGCCAACTCAATTGGTACAAACATCGACGCTTGGAAAGCATCCAACGCACGACTACCAACTTACT
GAAACAAATGTATGATTTGGGCGTTCCTACGAATGATATGGCGCAAACACGGTATCAAGTGTTGCTTAAACAGTTAGACC
ATACAGTTACTTCCATTACCGGAATGGTAAAACTGGAACAATGGCAGTTACATATAAACTGGGAAACTATGCCCATAGCC
AGTTTACTCAAGCGATCGCTCGAACGCATAGATAAATTAGTTCAAGAACAAAAGCTGTGGATTGGTGTCCACGGTTTAGC
ACAAGCCCACACAGAAAAGGAAGTAACCAACAGTGGTGCATTACTCAAAGGCGTTTCCACCCCAGCTAACCTATCAACAA
TGGCGATCGCTGGCGATATTGTAAAATTTGAACTAGTCCTTTACGAATTATTACTCGCCGCCTGTCATCGTTCTCCTAAC
AGCAGCAGAATAGATATCTGGTGTCGTCATATAGATAAGCAATTTTTAGAAGTATCAATTACAGATAACGGCACAATTCC
CACAGAATTACTCACAGAAATACAACAGAAAACTCACAACGATATTCTTGCTTTCTGTAATTTTGATCAATCGCCCAACT
TAAATTTGTTGATTTGCCAACAACTTATACAACAACTAGGTGGGGAATTAGATATCTATCAATCACCCGATAATCGAGTC
GTTAGCCGCTTAGTGCTGCCATTGGCTGAGATTAGTTCTTAA

Upstream 100 bases:

>100_bases
TATATATCCATAGTCAATAGCCAATAATTTTAATTTCCCCAACCCCCAGTCACCGCTCCCTTTCATCCAGAAATATCAAT
CAATACCCGTAAAGATATTA

Downstream 100 bases:

>100_bases
TTTTTCATCTCTGCGATAAGTAGAACGGCGTAAATATTTGTAGTTGGGATAAGTCAGTCCCGATGAAACAGATTTCACCG
CCAAACAGGAAAGATGTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: GAF Sensor Protein; GAF Domain-Containing Protein; GAF Domain Protein

Number of amino acids: Translated: 973; Mature: 973

Protein sequence:

>973_residues
MWVIWASYILQVMLIKNQMGQPHKSIAAEQPILALGRVLQILREEDDVDVLIETAINYIHSEFNYKLIWIASYDRLKHTL
FGRGGIAPGNDINFLRKRLVLQPGDLLEQVVIQQSPLGVADIRNEKRAGEWREVGTKFNIQGTIMLPMRHKNSCMGLLLL
GSERWGYLLSEDAKARLMMVLGELAASLYQQEINLQQKQIKRPDEPLLQLLENIRNLSNLEERLKAVVEATHSFVSPSRT
NIYWFERQGRYFWCRMGDQLVNIGRETNREQSAAGMTVQDLSDLYYALSVNKIIWIGDARSSLEGQFTAKLLQRLRVRSL
LAAPIIWQKDLLGFLAVEGYEPRIWTEADKNFVQGAAGFLSLVAPNDKIENIVKQIQEDSQLSSEVSQSIYTHQDWKETL
RVCAAKVLHRFNATRFLLLHYDPDQNNYQVIYQTQPHHRRPLSCSFGLLSQTDRQMLKSANATVAVENVEADLRFFNWRP
LLLEHGVRSLLICNCNQDQKAEVLLVVTHTSHRSWTNLERELLWVVSQQIGVVVRQWRLQKNNEQQQQVLQSIQECLRIV
DGSENSETEKNYLECAALRQIASVLNCPLALLLSWSHGESTAEIIPGVIPDNQFEVEISAKLSIQHEAVIQWALVENSYL
NVSINHLPPETRQWLHGEGIGQVLLMALRTGSDHQPTGVVLLADHRERHWPQHRLDAGKILIDQLAWLRRQQQISQRLES
TTQDLRQLNWYKHRRLESIQRTTTNLLKQMYDLGVPTNDMAQTRYQVLLKQLDHTVTSITGMVKLEQWQLHINWETMPIA
SLLKRSLERIDKLVQEQKLWIGVHGLAQAHTEKEVTNSGALLKGVSTPANLSTMAIAGDIVKFELVLYELLLAACHRSPN
SSRIDIWCRHIDKQFLEVSITDNGTIPTELLTEIQQKTHNDILAFCNFDQSPNLNLLICQQLIQQLGGELDIYQSPDNRV
VSRLVLPLAEISS

Sequences:

>Translated_973_residues
MWVIWASYILQVMLIKNQMGQPHKSIAAEQPILALGRVLQILREEDDVDVLIETAINYIHSEFNYKLIWIASYDRLKHTL
FGRGGIAPGNDINFLRKRLVLQPGDLLEQVVIQQSPLGVADIRNEKRAGEWREVGTKFNIQGTIMLPMRHKNSCMGLLLL
GSERWGYLLSEDAKARLMMVLGELAASLYQQEINLQQKQIKRPDEPLLQLLENIRNLSNLEERLKAVVEATHSFVSPSRT
NIYWFERQGRYFWCRMGDQLVNIGRETNREQSAAGMTVQDLSDLYYALSVNKIIWIGDARSSLEGQFTAKLLQRLRVRSL
LAAPIIWQKDLLGFLAVEGYEPRIWTEADKNFVQGAAGFLSLVAPNDKIENIVKQIQEDSQLSSEVSQSIYTHQDWKETL
RVCAAKVLHRFNATRFLLLHYDPDQNNYQVIYQTQPHHRRPLSCSFGLLSQTDRQMLKSANATVAVENVEADLRFFNWRP
LLLEHGVRSLLICNCNQDQKAEVLLVVTHTSHRSWTNLERELLWVVSQQIGVVVRQWRLQKNNEQQQQVLQSIQECLRIV
DGSENSETEKNYLECAALRQIASVLNCPLALLLSWSHGESTAEIIPGVIPDNQFEVEISAKLSIQHEAVIQWALVENSYL
NVSINHLPPETRQWLHGEGIGQVLLMALRTGSDHQPTGVVLLADHRERHWPQHRLDAGKILIDQLAWLRRQQQISQRLES
TTQDLRQLNWYKHRRLESIQRTTTNLLKQMYDLGVPTNDMAQTRYQVLLKQLDHTVTSITGMVKLEQWQLHINWETMPIA
SLLKRSLERIDKLVQEQKLWIGVHGLAQAHTEKEVTNSGALLKGVSTPANLSTMAIAGDIVKFELVLYELLLAACHRSPN
SSRIDIWCRHIDKQFLEVSITDNGTIPTELLTEIQQKTHNDILAFCNFDQSPNLNLLICQQLIQQLGGELDIYQSPDNRV
VSRLVLPLAEISS
>Mature_973_residues
MWVIWASYILQVMLIKNQMGQPHKSIAAEQPILALGRVLQILREEDDVDVLIETAINYIHSEFNYKLIWIASYDRLKHTL
FGRGGIAPGNDINFLRKRLVLQPGDLLEQVVIQQSPLGVADIRNEKRAGEWREVGTKFNIQGTIMLPMRHKNSCMGLLLL
GSERWGYLLSEDAKARLMMVLGELAASLYQQEINLQQKQIKRPDEPLLQLLENIRNLSNLEERLKAVVEATHSFVSPSRT
NIYWFERQGRYFWCRMGDQLVNIGRETNREQSAAGMTVQDLSDLYYALSVNKIIWIGDARSSLEGQFTAKLLQRLRVRSL
LAAPIIWQKDLLGFLAVEGYEPRIWTEADKNFVQGAAGFLSLVAPNDKIENIVKQIQEDSQLSSEVSQSIYTHQDWKETL
RVCAAKVLHRFNATRFLLLHYDPDQNNYQVIYQTQPHHRRPLSCSFGLLSQTDRQMLKSANATVAVENVEADLRFFNWRP
LLLEHGVRSLLICNCNQDQKAEVLLVVTHTSHRSWTNLERELLWVVSQQIGVVVRQWRLQKNNEQQQQVLQSIQECLRIV
DGSENSETEKNYLECAALRQIASVLNCPLALLLSWSHGESTAEIIPGVIPDNQFEVEISAKLSIQHEAVIQWALVENSYL
NVSINHLPPETRQWLHGEGIGQVLLMALRTGSDHQPTGVVLLADHRERHWPQHRLDAGKILIDQLAWLRRQQQISQRLES
TTQDLRQLNWYKHRRLESIQRTTTNLLKQMYDLGVPTNDMAQTRYQVLLKQLDHTVTSITGMVKLEQWQLHINWETMPIA
SLLKRSLERIDKLVQEQKLWIGVHGLAQAHTEKEVTNSGALLKGVSTPANLSTMAIAGDIVKFELVLYELLLAACHRSPN
SSRIDIWCRHIDKQFLEVSITDNGTIPTELLTEIQQKTHNDILAFCNFDQSPNLNLLICQQLIQQLGGELDIYQSPDNRV
VSRLVLPLAEISS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 111536; Mature: 111536

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWVIWASYILQVMLIKNQMGQPHKSIAAEQPILALGRVLQILREEDDVDVLIETAINYIH
CEEEHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
SEFNYKLIWIASYDRLKHTLFGRGGIAPGNDINFLRKRLVLQPGDLLEQVVIQQSPLGVA
HCCCEEEEEEECHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCHH
DIRNEKRAGEWREVGTKFNIQGTIMLPMRHKNSCMGLLLLGSERWGYLLSEDAKARLMMV
HCCCCCCCCHHHHCCCEEEEEEEEEEEECCCCCCEEEEEECCCCCCCEECCCHHHHHHHH
LGELAASLYQQEINLQQKQIKRPDEPLLQLLENIRNLSNLEERLKAVVEATHSFVSPSRT
HHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NIYWFERQGRYFWCRMGDQLVNIGRETNREQSAAGMTVQDLSDLYYALSVNKIIWIGDAR
EEEEEEECCCEEEEECCHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHEEECEEEEEECCC
SSLEGQFTAKLLQRLRVRSLLAAPIIWQKDLLGFLAVEGYEPRIWTEADKNFVQGAAGFL
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHH
SLVAPNDKIENIVKQIQEDSQLSSEVSQSIYTHQDWKETLRVCAAKVLHRFNATRFLLLH
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
YDPDQNNYQVIYQTQPHHRRPLSCSFGLLSQTDRQMLKSANATVAVENVEADLRFFNWRP
ECCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCH
LLLEHGVRSLLICNCNQDQKAEVLLVVTHTSHRSWTNLERELLWVVSQQIGVVVRQWRLQ
HHHHCCCCEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
KNNEQQQQVLQSIQECLRIVDGSENSETEKNYLECAALRQIASVLNCPLALLLSWSHGES
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHEEECCCCCC
TAEIIPGVIPDNQFEVEISAKLSIQHEAVIQWALVENSYLNVSINHLPPETRQWLHGEGI
HHHHCCCCCCCCEEEEEEEEEEEECHHHHEEEEEEECCEEEEEECCCCCHHHHHHCCCCH
GQVLLMALRTGSDHQPTGVVLLADHRERHWPQHRLDAGKILIDQLAWLRRQQQISQRLES
HHHHHHHHHCCCCCCCCEEEEEECCCHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
TTQDLRQLNWYKHRRLESIQRTTTNLLKQMYDLGVPTNDMAQTRYQVLLKQLDHTVTSIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GMVKLEQWQLHINWETMPIASLLKRSLERIDKLVQEQKLWIGVHGLAQAHTEKEVTNSGA
HHEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHCCCCC
LLKGVSTPANLSTMAIAGDIVKFELVLYELLLAACHRSPNSSRIDIWCRHIDKQFLEVSI
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCHHHEEEEE
TDNGTIPTELLTEIQQKTHNDILAFCNFDQSPNLNLLICQQLIQQLGGELDIYQSPDNRV
CCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEECCHHHH
VSRLVLPLAEISS
HHHHHHHHHHHCC
>Mature Secondary Structure
MWVIWASYILQVMLIKNQMGQPHKSIAAEQPILALGRVLQILREEDDVDVLIETAINYIH
CEEEHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
SEFNYKLIWIASYDRLKHTLFGRGGIAPGNDINFLRKRLVLQPGDLLEQVVIQQSPLGVA
HCCCEEEEEEECHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCHH
DIRNEKRAGEWREVGTKFNIQGTIMLPMRHKNSCMGLLLLGSERWGYLLSEDAKARLMMV
HCCCCCCCCHHHHCCCEEEEEEEEEEEECCCCCCEEEEEECCCCCCCEECCCHHHHHHHH
LGELAASLYQQEINLQQKQIKRPDEPLLQLLENIRNLSNLEERLKAVVEATHSFVSPSRT
HHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NIYWFERQGRYFWCRMGDQLVNIGRETNREQSAAGMTVQDLSDLYYALSVNKIIWIGDAR
EEEEEEECCCEEEEECCHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHEEECEEEEEECCC
SSLEGQFTAKLLQRLRVRSLLAAPIIWQKDLLGFLAVEGYEPRIWTEADKNFVQGAAGFL
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHH
SLVAPNDKIENIVKQIQEDSQLSSEVSQSIYTHQDWKETLRVCAAKVLHRFNATRFLLLH
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
YDPDQNNYQVIYQTQPHHRRPLSCSFGLLSQTDRQMLKSANATVAVENVEADLRFFNWRP
ECCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCH
LLLEHGVRSLLICNCNQDQKAEVLLVVTHTSHRSWTNLERELLWVVSQQIGVVVRQWRLQ
HHHHCCCCEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
KNNEQQQQVLQSIQECLRIVDGSENSETEKNYLECAALRQIASVLNCPLALLLSWSHGES
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHEEECCCCCC
TAEIIPGVIPDNQFEVEISAKLSIQHEAVIQWALVENSYLNVSINHLPPETRQWLHGEGI
HHHHCCCCCCCCEEEEEEEEEEEECHHHHEEEEEEECCEEEEEECCCCCHHHHHHCCCCH
GQVLLMALRTGSDHQPTGVVLLADHRERHWPQHRLDAGKILIDQLAWLRRQQQISQRLES
HHHHHHHHHCCCCCCCCEEEEEECCCHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
TTQDLRQLNWYKHRRLESIQRTTTNLLKQMYDLGVPTNDMAQTRYQVLLKQLDHTVTSIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GMVKLEQWQLHINWETMPIASLLKRSLERIDKLVQEQKLWIGVHGLAQAHTEKEVTNSGA
HHEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHCCCCC
LLKGVSTPANLSTMAIAGDIVKFELVLYELLLAACHRSPNSSRIDIWCRHIDKQFLEVSI
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCHHHEEEEE
TDNGTIPTELLTEIQQKTHNDILAFCNFDQSPNLNLLICQQLIQQLGGELDIYQSPDNRV
CCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEECCHHHH
VSRLVLPLAEISS
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA