| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is 17231746
Identifier: 17231746
GI number: 17231746
Start: 5102573
End: 5103769
Strand: Reverse
Name: 17231746
Synonym: all4254
Alternate gene names: NA
Gene position: 5103769-5102573 (Counterclockwise)
Preceding gene: 17231748
Following gene: 17231745
Centisome position: 79.58
GC content: 43.19
Gene sequence:
>1197_bases GTGCGACAAATGGGGGTTGTGATGCAAACTTTAAAACAGGGTTTCGAGGAGCGCAATCTCGCTATGGCAACGGAAGCAGA AAAACTAGCACAATTTTGGCGCAAGCGGCTAGCTGCGGAGTGTCCAGAACAAAATGTAGCTGCAATAGAGAGTATTATTC TCTGGCTGTTAGGTCGTGATGCACAACGATTGGATTTACTAAACCCTAAAGAACTTGAAATTGCCAAGCAAGCGATGGAA TATCGCTGGAAGATTTTAAGTCAACGCTACTTGGGTGTAGGTCGAGAACGTGCTTATCGCAACCTGATCACTCGGCTGGG AAGTTTAGTCACATTACGGAATAAAATTCAAACCTGGATTGCTCTGAGCCGCGATCGCCAACGTGGTGTTCTTGATGTAT TACAAGAAGTAATACAAGAATTGCTACAAAATGACACTTACATCCAACAGCAAATGGCGTACATCGCCGAGGTTGCTCTA GATAAGAGACTCAAAGATACTTTACTATTTGCGACTGTAGAAGAATATTGTTTACGACCAGTACGCAATCAGCCCTTGTT AGTTTATCGTTTTGTCAACTACCTGCGCCGTTCTCAACGCGGTGGGTTAACTCAAGTCCCTGGTGGTGACTTAGTTAGGC TAGTTTCCGAAGAAGTATTGACAGACGACAACGACAATCGAGTTAACCTAGTAGATAATCAAGCGATCGCTGAATATCAA GAAGCACAGCAAATAGAAGAACAACAAGCGCTGCGCCAGACAGTACAGCAAGAGTTTGCCAACTACTTACAAGAAAACCT GGGAACAGAAGCAGTAGAGTGGCTAAAACTGTATTTACAAGGCAAAACCCAAGATGAAATCGCCAAGAAATTAAATAAAC CAATCAAAGAAATCTATCGACTGCGAGAAAAAATCAGCTACCACGCAGTGCGTGTCTTTGCCCTCAAGGGTAAACCAGAA CTCGTAGATAACTGGCTGGCAATTTCCTTACAGGAAAATAACTTGGGTTTAACACAAAACCAATGGCAAGAACTCTACGA AAAATTAAGCCCTATTGCACGACAAATCTTGGATTTGCGGAAATCAGGCAACTCCACAGAAGCTGTAGCCCAACAATTAA ACCTCAAACAGCATCAAGTCATGGGCGAATGGACTAAAGTTTATCTTGCAGCTCAAGCCATCAGAACGCAAGAGTAA
Upstream 100 bases:
>100_bases CTGCATAAAATTCGTCAATAAAGACGTAATAACAATGGAATCGTTGATACGTCCTCATCAAGATGACGGACTCACGGTGA TTTGCTAGCTCACAAGATAA
Downstream 100 bases:
>100_bases CTATGATGAGTGCTAAATACGGAGAACTGAGAACTGAGTGCTGAGGACTGAGTAGTGTTAGCAAGGTGAGGCGTAAGCCC TTGCTGAGTAAAAATTCTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MRQMGVVMQTLKQGFEERNLAMATEAEKLAQFWRKRLAAECPEQNVAAIESIILWLLGRDAQRLDLLNPKELEIAKQAME YRWKILSQRYLGVGRERAYRNLITRLGSLVTLRNKIQTWIALSRDRQRGVLDVLQEVIQELLQNDTYIQQQMAYIAEVAL DKRLKDTLLFATVEEYCLRPVRNQPLLVYRFVNYLRRSQRGGLTQVPGGDLVRLVSEEVLTDDNDNRVNLVDNQAIAEYQ EAQQIEEQQALRQTVQQEFANYLQENLGTEAVEWLKLYLQGKTQDEIAKKLNKPIKEIYRLREKISYHAVRVFALKGKPE LVDNWLAISLQENNLGLTQNQWQELYEKLSPIARQILDLRKSGNSTEAVAQQLNLKQHQVMGEWTKVYLAAQAIRTQE
Sequences:
>Translated_398_residues MRQMGVVMQTLKQGFEERNLAMATEAEKLAQFWRKRLAAECPEQNVAAIESIILWLLGRDAQRLDLLNPKELEIAKQAME YRWKILSQRYLGVGRERAYRNLITRLGSLVTLRNKIQTWIALSRDRQRGVLDVLQEVIQELLQNDTYIQQQMAYIAEVAL DKRLKDTLLFATVEEYCLRPVRNQPLLVYRFVNYLRRSQRGGLTQVPGGDLVRLVSEEVLTDDNDNRVNLVDNQAIAEYQ EAQQIEEQQALRQTVQQEFANYLQENLGTEAVEWLKLYLQGKTQDEIAKKLNKPIKEIYRLREKISYHAVRVFALKGKPE LVDNWLAISLQENNLGLTQNQWQELYEKLSPIARQILDLRKSGNSTEAVAQQLNLKQHQVMGEWTKVYLAAQAIRTQE >Mature_398_residues MRQMGVVMQTLKQGFEERNLAMATEAEKLAQFWRKRLAAECPEQNVAAIESIILWLLGRDAQRLDLLNPKELEIAKQAME YRWKILSQRYLGVGRERAYRNLITRLGSLVTLRNKIQTWIALSRDRQRGVLDVLQEVIQELLQNDTYIQQQMAYIAEVAL DKRLKDTLLFATVEEYCLRPVRNQPLLVYRFVNYLRRSQRGGLTQVPGGDLVRLVSEEVLTDDNDNRVNLVDNQAIAEYQ EAQQIEEQQALRQTVQQEFANYLQENLGTEAVEWLKLYLQGKTQDEIAKKLNKPIKEIYRLREKISYHAVRVFALKGKPE LVDNWLAISLQENNLGLTQNQWQELYEKLSPIARQILDLRKSGNSTEAVAQQLNLKQHQVMGEWTKVYLAAQAIRTQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46367; Mature: 46367
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQMGVVMQTLKQGFEERNLAMATEAEKLAQFWRKRLAAECPEQNVAAIESIILWLLGRD CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC AQRLDLLNPKELEIAKQAMEYRWKILSQRYLGVGRERAYRNLITRLGSLVTLRNKIQTWI HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ALSRDRQRGVLDVLQEVIQELLQNDTYIQQQMAYIAEVALDKRLKDTLLFATVEEYCLRP HHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VRNQPLLVYRFVNYLRRSQRGGLTQVPGGDLVRLVSEEVLTDDNDNRVNLVDNQAIAEYQ CCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHH EAQQIEEQQALRQTVQQEFANYLQENLGTEAVEWLKLYLQGKTQDEIAKKLNKPIKEIYR HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LREKISYHAVRVFALKGKPELVDNWLAISLQENNLGLTQNQWQELYEKLSPIARQILDLR HHHHHHHHHHEEEEECCCHHHHCCHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH KSGNSTEAVAQQLNLKQHQVMGEWTKVYLAAQAIRTQE HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRQMGVVMQTLKQGFEERNLAMATEAEKLAQFWRKRLAAECPEQNVAAIESIILWLLGRD CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC AQRLDLLNPKELEIAKQAMEYRWKILSQRYLGVGRERAYRNLITRLGSLVTLRNKIQTWI HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ALSRDRQRGVLDVLQEVIQELLQNDTYIQQQMAYIAEVALDKRLKDTLLFATVEEYCLRP HHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VRNQPLLVYRFVNYLRRSQRGGLTQVPGGDLVRLVSEEVLTDDNDNRVNLVDNQAIAEYQ CCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHH EAQQIEEQQALRQTVQQEFANYLQENLGTEAVEWLKLYLQGKTQDEIAKKLNKPIKEIYR HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LREKISYHAVRVFALKGKPELVDNWLAISLQENNLGLTQNQWQELYEKLSPIARQILDLR HHHHHHHHHHEEEEECCCHHHHCCHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH KSGNSTEAVAQQLNLKQHQVMGEWTKVYLAAQAIRTQE HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA