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The map label for this gene is ypjH [H]

Identifier: 17231670

GI number: 17231670

Start: 5025948

End: 5027096

Strand: Direct

Name: ypjH [H]

Synonym: alr4178

Alternate gene names: 17231670

Gene position: 5025948-5027096 (Clockwise)

Preceding gene: 17231668

Following gene: 17231708

Centisome position: 78.36

GC content: 43.69

Gene sequence:

>1149_bases
ATGCGTATAGCTTGGATTGGAAAAAAATCACCCTTTTGTGGCAATGTCACTTACAGTAGAGAAGTTACAAACGCCTTGCT
AGATAGGGGACATGAAGTCAGTTTTCTCCACTTTGCTCAAGAAGAAACTGAACCTGACAACTGGCCGAAATTCCAAGAAG
TGCCTCTACCCTTCATTTATAAGTCTCAGGTTTACACTATTCCAACGTTCAAAGCGACAAAGCTTTTAACTGATTCACTG
CGAGAAATCAAGCCAGATATTGTCCATGCGTCTCTGACTTTATCTCCCCTGGACTTTTTTCTACCAGAAATTTGTGACCA
ACTGAACTTGCCCCTAATTGCCACATTTCACACTCCATTTGCAGGCAAAGGCGCAAAACTGATATCAGGAACACAACTTT
TAGCTTATCAACTATACGCGCCTTTTTTGGGCAACTACGATCGCGTCATTGTCTTTTCCCAAATTCAGCGAGAACTATTG
GCGAGTATGGGGGTGCGGGAGAAAAATATCGCAGTCATCCCCAATGGTGTGGATACCAGCAAATACTCGCCTGGGTCTTC
TCTTGTGAAAAAAGAATTTCAAGCGGAACGATTGTTTGTCTACCAAGGAAGAATCGCCCCAGAGAAAAATGTAGAATCCC
TGTTAAGAGCTTGGAAGCAAGCCAACATGGGTGCTGATAGTAAGTTATTAATGGTTGGAGATGGGCCTTTGAGAGCTACT
TTAGAACCCTTTTATGGTTCTGAGTATGGCATTATCTGGTTGGGATTTGTCGCTGACGAAGACCGACGCATACAGATTCT
CCAGGGTGCAGATGTATTTATTTTACCTTCTCTAGTCGAGGGTTTATCCTTATCGCTGTTAGAGGGTATGGCTTGCGGAC
TCGCTTGTTTAGCAACCGATGTGGGCGCAGACGGCGAAGTGTTGGAAAAAGGTGCTGGTGTAGTCATGAATACCAAAACT
GTGCGATCGCAATTACGCACCCTTTTACCACTATTCCAAGACCATCCAGAGTTAACAACAGTGCTGGGACAAAAAGCTAG
AAAGCGCGTTGAAGAACGCTACACACTAGAGAAGAATATTACTCATTTAGAAGAACTTTATCGTGAAGTTTTAGCACAGC
AGCCTGTAAAACTCATTTGGGGAGCTTAG

Upstream 100 bases:

>100_bases
ACTAACCGCACTTTTTCAAGATAGCCAGCAAGTACAAAAAGATAAACAACAAAAAACCACAAGAAATAATCAATCACGCT
CTTCTGATAGCCGGTAAAGA

Downstream 100 bases:

>100_bases
AGGTAAAATAGACTAATTTTTAGATTCTTAGTTTTTAACAACTTCAATTATTTAAAAGTTAGAGGTTAGCAAGCTATAAT
TTGCTACCTCTTTAAATCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MRIAWIGKKSPFCGNVTYSREVTNALLDRGHEVSFLHFAQEETEPDNWPKFQEVPLPFIYKSQVYTIPTFKATKLLTDSL
REIKPDIVHASLTLSPLDFFLPEICDQLNLPLIATFHTPFAGKGAKLISGTQLLAYQLYAPFLGNYDRVIVFSQIQRELL
ASMGVREKNIAVIPNGVDTSKYSPGSSLVKKEFQAERLFVYQGRIAPEKNVESLLRAWKQANMGADSKLLMVGDGPLRAT
LEPFYGSEYGIIWLGFVADEDRRIQILQGADVFILPSLVEGLSLSLLEGMACGLACLATDVGADGEVLEKGAGVVMNTKT
VRSQLRTLLPLFQDHPELTTVLGQKARKRVEERYTLEKNITHLEELYREVLAQQPVKLIWGA

Sequences:

>Translated_382_residues
MRIAWIGKKSPFCGNVTYSREVTNALLDRGHEVSFLHFAQEETEPDNWPKFQEVPLPFIYKSQVYTIPTFKATKLLTDSL
REIKPDIVHASLTLSPLDFFLPEICDQLNLPLIATFHTPFAGKGAKLISGTQLLAYQLYAPFLGNYDRVIVFSQIQRELL
ASMGVREKNIAVIPNGVDTSKYSPGSSLVKKEFQAERLFVYQGRIAPEKNVESLLRAWKQANMGADSKLLMVGDGPLRAT
LEPFYGSEYGIIWLGFVADEDRRIQILQGADVFILPSLVEGLSLSLLEGMACGLACLATDVGADGEVLEKGAGVVMNTKT
VRSQLRTLLPLFQDHPELTTVLGQKARKRVEERYTLEKNITHLEELYREVLAQQPVKLIWGA
>Mature_382_residues
MRIAWIGKKSPFCGNVTYSREVTNALLDRGHEVSFLHFAQEETEPDNWPKFQEVPLPFIYKSQVYTIPTFKATKLLTDSL
REIKPDIVHASLTLSPLDFFLPEICDQLNLPLIATFHTPFAGKGAKLISGTQLLAYQLYAPFLGNYDRVIVFSQIQRELL
ASMGVREKNIAVIPNGVDTSKYSPGSSLVKKEFQAERLFVYQGRIAPEKNVESLLRAWKQANMGADSKLLMVGDGPLRAT
LEPFYGSEYGIIWLGFVADEDRRIQILQGADVFILPSLVEGLSLSLLEGMACGLACLATDVGADGEVLEKGAGVVMNTKT
VRSQLRTLLPLFQDHPELTTVLGQKARKRVEERYTLEKNITHLEELYREVLAQQPVKLIWGA

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17532709, Length=238, Percent_Identity=27.7310924369748, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI9755344, Length=339, Percent_Identity=24.7787610619469, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 42731; Mature: 42731

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIAWIGKKSPFCGNVTYSREVTNALLDRGHEVSFLHFAQEETEPDNWPKFQEVPLPFIY
CEEEEECCCCCCCCCCEEHHHHHHHHHHCCCCEEEEEEHHHCCCCCCCCCHHCCCCCEEE
KSQVYTIPTFKATKLLTDSLREIKPDIVHASLTLSPLDFFLPEICDQLNLPLIATFHTPF
CCCEEECCCCHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHCCCCEEEEECCCC
AGKGAKLISGTQLLAYQLYAPFLGNYDRVIVFSQIQRELLASMGVREKNIAVIPNGVDTS
CCCCCEEECCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCCEEEECCCCCCC
KYSPGSSLVKKEFQAERLFVYQGRIAPEKNVESLLRAWKQANMGADSKLLMVGDGPLRAT
CCCCCHHHHHHHHHHCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCEE
LEPFYGSEYGIIWLGFVADEDRRIQILQGADVFILPSLVEGLSLSLLEGMACGLACLATD
ECCCCCCCCCEEEEEEEECCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHC
VGADGEVLEKGAGVVMNTKTVRSQLRTLLPLFQDHPELTTVLGQKARKRVEERYTLEKNI
CCCCHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
THLEELYREVLAQQPVKLIWGA
HHHHHHHHHHHHHCCHHHHCCC
>Mature Secondary Structure
MRIAWIGKKSPFCGNVTYSREVTNALLDRGHEVSFLHFAQEETEPDNWPKFQEVPLPFIY
CEEEEECCCCCCCCCCEEHHHHHHHHHHCCCCEEEEEEHHHCCCCCCCCCHHCCCCCEEE
KSQVYTIPTFKATKLLTDSLREIKPDIVHASLTLSPLDFFLPEICDQLNLPLIATFHTPF
CCCEEECCCCHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHCCCCEEEEECCCC
AGKGAKLISGTQLLAYQLYAPFLGNYDRVIVFSQIQRELLASMGVREKNIAVIPNGVDTS
CCCCCEEECCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCCEEEECCCCCCC
KYSPGSSLVKKEFQAERLFVYQGRIAPEKNVESLLRAWKQANMGADSKLLMVGDGPLRAT
CCCCCHHHHHHHHHHCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCEE
LEPFYGSEYGIIWLGFVADEDRRIQILQGADVFILPSLVEGLSLSLLEGMACGLACLATD
ECCCCCCCCCEEEEEEEECCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHC
VGADGEVLEKGAGVVMNTKTVRSQLRTLLPLFQDHPELTTVLGQKARKRVEERYTLEKNI
CCCCHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
THLEELYREVLAQQPVKLIWGA
HHHHHHHHHHHHHCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]