Click here to switch to the map view.

The map label for this gene is yfiS [H]

Identifier: 17231668

GI number: 17231668

Start: 5023879

End: 5025516

Strand: Direct

Name: yfiS [H]

Synonym: alr4176

Alternate gene names: 17231668

Gene position: 5023879-5025516 (Clockwise)

Preceding gene: 17231667

Following gene: 17231670

Centisome position: 78.33

GC content: 43.1

Gene sequence:

>1638_bases
ATGATGCAACCGTCTGATTTGGATAGAAAAATTCTGCCATTGTCGCCAAGCCACGCCAAAAGACAGAATAGGGCATCAGA
TCCTACAGCACAGGCTCACTTAAGTGCTGTTCCCTATCCTGTAACCAATCACAAAGATAGCCAGGAATCATCTGACCAAG
ATGTTCCTACCAATGAGAAAAGTGGTATTTCGCAAAATCCCCAAGCCGATTTACCCAATGAAACAGATAAACAATCCTCA
GAGCCATTAAATATTTTGGAGTTTAATGGTAACGGGCAGAGTGTACCATTAGTTACTACTCCAGCAGCAACACCAACAGA
TGACTCTGGTTCTGGTGGGGAAGCCGACTCTGGAGATAATGAACATAAAGGGTTTTTAGCTGTATTCAAAAACCCCAATT
TCTTAGCGCTGTGGGGTGGACAAGTCTTCTGTCAACTGGCAGATAAGGTGTATTTGGTCTTGATGATTGCCTTAATTAAT
ACTCAGTTCCAGGCAAGTAATCAAAGTATTAGTGGTTGGGTATCAGCATTGATGATGGCTTTTACCATACCAGCAGTGTT
GTTTGGTTCTGTGGCTGGCGTATTTGTAGATAGGTGGTCGAAAAAGGCTGTATTAGTAGCGACAAATGCTTGGCGCGGTA
TTTTGGTTTTAGCTATTCCTTTGTTGTTGTGGTTAACTCATGATTGGCAACCCATAGGAGTTTTACCTGTAGGTTTTCTC
ATCATTTTGGGTGTGACGTTTTTGGTGTCCACATTGACACAGTTTTTTGCTCCAGCAGAACAAGCCGCAATTCCCTTGGT
GGTGAAAGAACAGGACTTACTTTCGGCTAATTCACTATACACAACCACAATGATGGCTTCAGTGATAGTGGGTTTTGCGG
TAGGAGAACCACTACTCGCCTTTGCCGATGGTATTTGGTCGCAACTAGGGGGTAATAATGGGTTTGGCAAAGAACTTTTG
GTTGGTGGTAGTTATGCGATCGCCAGTATAATTTTGCTACTGTTGGTAACTCACGAAAAAACCCACGCACCAGAAACAGA
ATTTCCCCACGTATTTTCAGACTTACGCGATGGTTTACGTTACCTCAAAGAAAATTACCGCGTCCGTAACGCTCTATTGC
AATTGATGATTTTATTTTCTGTCTTTGCCGCCTTGACTGTTTTAGCAGTGCGGATGGCAGAAATCATTCCTCATATAAAA
GCTTCTCAATTTGGTTTTTTACTAGCGGCTGGTGGCGTTGGTATTGCAGCCGGCGCGACCATTTTGGGTCAGTTTGGTCA
ACGCTTCTCCTACACTCAACTGAGCCTGTGTGGTTGCTTGGGTATGGCAGCATCTTTAGTTGGTCTTTCTATCTTCACAA
CACAACTAGGACTGGTGTTAATTTTAGTAACATTGATGGGTGTTTTTGGCTCTTTAATCGGTATACCCATGCAGACAGCT
ATCCAAACAGAAACTTTGCCCGAAATGCGTGGTAAAGTATTCGGTCTGCAAAATAACGTAATTAATATTGCTCTGTCCCT
ACCTTTGGCGTTAGCAGGTCTAGCAGAAACCTTTGTGGGATTACAAGCTGTCTTTTTGGCATTAGCGGCGATCGTCTTTT
CCGGAGGTATCTTAACTTGGTATAACTCTCGTGATTAA

Upstream 100 bases:

>100_bases
TGGTTATCTGTGGAGCAGATTTTGCGTCAGTATGCTCAGTATCATTTAGGTCGCCCTATTCGCTCCGCCACTTTGATTGA
CTCTTATTTTGCTGCCAACC

Downstream 100 bases:

>100_bases
TCCGCTAATTCTGGGGTTAATTATAGATTTTGCTTTCATGCTAAACTGAGTGCAGAAAATTTATTAAAACCTTGCTGGGA
ATCAATTGGAGATGAGCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 545; Mature: 545

Protein sequence:

>545_residues
MMQPSDLDRKILPLSPSHAKRQNRASDPTAQAHLSAVPYPVTNHKDSQESSDQDVPTNEKSGISQNPQADLPNETDKQSS
EPLNILEFNGNGQSVPLVTTPAATPTDDSGSGGEADSGDNEHKGFLAVFKNPNFLALWGGQVFCQLADKVYLVLMIALIN
TQFQASNQSISGWVSALMMAFTIPAVLFGSVAGVFVDRWSKKAVLVATNAWRGILVLAIPLLLWLTHDWQPIGVLPVGFL
IILGVTFLVSTLTQFFAPAEQAAIPLVVKEQDLLSANSLYTTTMMASVIVGFAVGEPLLAFADGIWSQLGGNNGFGKELL
VGGSYAIASIILLLLVTHEKTHAPETEFPHVFSDLRDGLRYLKENYRVRNALLQLMILFSVFAALTVLAVRMAEIIPHIK
ASQFGFLLAAGGVGIAAGATILGQFGQRFSYTQLSLCGCLGMAASLVGLSIFTTQLGLVLILVTLMGVFGSLIGIPMQTA
IQTETLPEMRGKVFGLQNNVINIALSLPLALAGLAETFVGLQAVFLALAAIVFSGGILTWYNSRD

Sequences:

>Translated_545_residues
MMQPSDLDRKILPLSPSHAKRQNRASDPTAQAHLSAVPYPVTNHKDSQESSDQDVPTNEKSGISQNPQADLPNETDKQSS
EPLNILEFNGNGQSVPLVTTPAATPTDDSGSGGEADSGDNEHKGFLAVFKNPNFLALWGGQVFCQLADKVYLVLMIALIN
TQFQASNQSISGWVSALMMAFTIPAVLFGSVAGVFVDRWSKKAVLVATNAWRGILVLAIPLLLWLTHDWQPIGVLPVGFL
IILGVTFLVSTLTQFFAPAEQAAIPLVVKEQDLLSANSLYTTTMMASVIVGFAVGEPLLAFADGIWSQLGGNNGFGKELL
VGGSYAIASIILLLLVTHEKTHAPETEFPHVFSDLRDGLRYLKENYRVRNALLQLMILFSVFAALTVLAVRMAEIIPHIK
ASQFGFLLAAGGVGIAAGATILGQFGQRFSYTQLSLCGCLGMAASLVGLSIFTTQLGLVLILVTLMGVFGSLIGIPMQTA
IQTETLPEMRGKVFGLQNNVINIALSLPLALAGLAETFVGLQAVFLALAAIVFSGGILTWYNSRD
>Mature_545_residues
MMQPSDLDRKILPLSPSHAKRQNRASDPTAQAHLSAVPYPVTNHKDSQESSDQDVPTNEKSGISQNPQADLPNETDKQSS
EPLNILEFNGNGQSVPLVTTPAATPTDDSGSGGEADSGDNEHKGFLAVFKNPNFLALWGGQVFCQLADKVYLVLMIALIN
TQFQASNQSISGWVSALMMAFTIPAVLFGSVAGVFVDRWSKKAVLVATNAWRGILVLAIPLLLWLTHDWQPIGVLPVGFL
IILGVTFLVSTLTQFFAPAEQAAIPLVVKEQDLLSANSLYTTTMMASVIVGFAVGEPLLAFADGIWSQLGGNNGFGKELL
VGGSYAIASIILLLLVTHEKTHAPETEFPHVFSDLRDGLRYLKENYRVRNALLQLMILFSVFAALTVLAVRMAEIIPHIK
ASQFGFLLAAGGVGIAAGATILGQFGQRFSYTQLSLCGCLGMAASLVGLSIFTTQLGLVLILVTLMGVFGSLIGIPMQTA
IQTETLPEMRGKVFGLQNNVINIALSLPLALAGLAETFVGLQAVFLALAAIVFSGGILTWYNSRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 58254; Mature: 58254

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQPSDLDRKILPLSPSHAKRQNRASDPTAQAHLSAVPYPVTNHKDSQESSDQDVPTNEK
CCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
SGISQNPQADLPNETDKQSSEPLNILEFNGNGQSVPLVTTPAATPTDDSGSGGEADSGDN
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
EHKGFLAVFKNPNFLALWGGQVFCQLADKVYLVLMIALINTQFQASNQSISGWVSALMMA
CCCCEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
FTIPAVLFGSVAGVFVDRWSKKAVLVATNAWRGILVLAIPLLLWLTHDWQPIGVLPVGFL
HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
IILGVTFLVSTLTQFFAPAEQAAIPLVVKEQDLLSANSLYTTTMMASVIVGFAVGEPLLA
HHHHHHHHHHHHHHHHCCHHHCCCCEEECCHHHHCCCHHHHHHHHHHHHHHHHCCCHHHH
FADGIWSQLGGNNGFGKELLVGGSYAIASIILLLLVTHEKTHAPETEFPHVFSDLRDGLR
HHHHHHHHCCCCCCCCCHHEECCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
YLKENYRVRNALLQLMILFSVFAALTVLAVRMAEIIPHIKASQFGFLLAAGGVGIAAGAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHH
ILGQFGQRFSYTQLSLCGCLGMAASLVGLSIFTTQLGLVLILVTLMGVFGSLIGIPMQTA
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
IQTETLPEMRGKVFGLQNNVINIALSLPLALAGLAETFVGLQAVFLALAAIVFSGGILTW
HHHHHHHHHHCCEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
YNSRD
CCCCC
>Mature Secondary Structure
MMQPSDLDRKILPLSPSHAKRQNRASDPTAQAHLSAVPYPVTNHKDSQESSDQDVPTNEK
CCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
SGISQNPQADLPNETDKQSSEPLNILEFNGNGQSVPLVTTPAATPTDDSGSGGEADSGDN
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
EHKGFLAVFKNPNFLALWGGQVFCQLADKVYLVLMIALINTQFQASNQSISGWVSALMMA
CCCCEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
FTIPAVLFGSVAGVFVDRWSKKAVLVATNAWRGILVLAIPLLLWLTHDWQPIGVLPVGFL
HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
IILGVTFLVSTLTQFFAPAEQAAIPLVVKEQDLLSANSLYTTTMMASVIVGFAVGEPLLA
HHHHHHHHHHHHHHHHCCHHHCCCCEEECCHHHHCCCHHHHHHHHHHHHHHHHCCCHHHH
FADGIWSQLGGNNGFGKELLVGGSYAIASIILLLLVTHEKTHAPETEFPHVFSDLRDGLR
HHHHHHHHCCCCCCCCCHHEECCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
YLKENYRVRNALLQLMILFSVFAALTVLAVRMAEIIPHIKASQFGFLLAAGGVGIAAGAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHH
ILGQFGQRFSYTQLSLCGCLGMAASLVGLSIFTTQLGLVLILVTLMGVFGSLIGIPMQTA
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
IQTETLPEMRGKVFGLQNNVINIALSLPLALAGLAETFVGLQAVFLALAAIVFSGGILTW
HHHHHHHHHHCCEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
YNSRD
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]