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The map label for this gene is recO [H]

Identifier: 17231667

GI number: 17231667

Start: 5023005

End: 5023895

Strand: Direct

Name: recO [H]

Synonym: alr4175

Alternate gene names: 17231667

Gene position: 5023005-5023895 (Clockwise)

Preceding gene: 17231666

Following gene: 17231668

Centisome position: 78.32

GC content: 42.65

Gene sequence:

>891_bases
ATGAATAAAACTTATAAAGCAACTGGCATTAATCTGAAAGCCCAAGCAATGGGAGAATCAGACAGAATAGTGACAATTTT
GACACAGGAATTCGGTTTGATTCGCGCGATCGCTCCAGGGTCAAGAAAACATAACTCCAGCCTTGGTGGTAGGAGTGCGA
TGTTTGTAGTCAATGAACTACTGATTGCCAAAGGGCGATCGCTAGATAAAATTACTCAAGCTCAAACCATCAAAACTTAT
CCAGGTCTGGCAAAAGATTTGGGTAAATTAGCTGCTAGTCAATATCTAGCAGAAATAGTTCTTTGTCAAGCCTTAAGTGA
ACAACCACAAGAGGAACTATACGAATTACTAAATGAACATCTCCATCGCTTGGAAGAATTACCCAAAGGAGAGTCGTTTG
GTGTTCTCGCTTACTTAGCTCATGCAGTTTTTCACCTTTTAGCGTTGGCTGGACTTACCCCACAAGTACAAATTTGTTGT
CTAACTCAACGCTCGTTAACACCTGATTTTGCAGATCCCAACTGGCGGGTAGGTTTTAGCATTGCGTCTGGGGGGATAGT
TTGCTTAGAAGCTTGGGAAGGCTTGCGAAAAGAAGCGAGAAAAGAATCAAAAGAAAAGTCACTTCCTCATCCGGTAACTC
CTGCTTACCAAACAGTTGTACATCGGCAAGAAATACCAGTAATTTCTGCTCGGTTAAATTCTGTAGAACTTGGGATGCTC
CAACAGCTCTCACAACCAGAGATAATGCAAATTAACACTACCAGTGATGCCAGCTGGTTATCTGTGGAGCAGATTTTGCG
TCAGTATGCTCAGTATCATTTAGGTCGCCCTATTCGCTCCGCCACTTTGATTGACTCTTATTTTGCTGCCAACCATGATG
CAACCGTCTGA

Upstream 100 bases:

>100_bases
GTCATTCGTTTTTGTCCTAAGTCATTTGTCCTTTGTCTTCACTAACGACCAATGACTAATGACCAATGACTAATGACTAA
TGACTAATGACCAATGACTA

Downstream 100 bases:

>100_bases
TTTGGATAGAAAAATTCTGCCATTGTCGCCAAGCCACGCCAAAAGACAGAATAGGGCATCAGATCCTACAGCACAGGCTC
ACTTAAGTGCTGTTCCCTAT

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MNKTYKATGINLKAQAMGESDRIVTILTQEFGLIRAIAPGSRKHNSSLGGRSAMFVVNELLIAKGRSLDKITQAQTIKTY
PGLAKDLGKLAASQYLAEIVLCQALSEQPQEELYELLNEHLHRLEELPKGESFGVLAYLAHAVFHLLALAGLTPQVQICC
LTQRSLTPDFADPNWRVGFSIASGGIVCLEAWEGLRKEARKESKEKSLPHPVTPAYQTVVHRQEIPVISARLNSVELGML
QQLSQPEIMQINTTSDASWLSVEQILRQYAQYHLGRPIRSATLIDSYFAANHDATV

Sequences:

>Translated_296_residues
MNKTYKATGINLKAQAMGESDRIVTILTQEFGLIRAIAPGSRKHNSSLGGRSAMFVVNELLIAKGRSLDKITQAQTIKTY
PGLAKDLGKLAASQYLAEIVLCQALSEQPQEELYELLNEHLHRLEELPKGESFGVLAYLAHAVFHLLALAGLTPQVQICC
LTQRSLTPDFADPNWRVGFSIASGGIVCLEAWEGLRKEARKESKEKSLPHPVTPAYQTVVHRQEIPVISARLNSVELGML
QQLSQPEIMQINTTSDASWLSVEQILRQYAQYHLGRPIRSATLIDSYFAANHDATV
>Mature_296_residues
MNKTYKATGINLKAQAMGESDRIVTILTQEFGLIRAIAPGSRKHNSSLGGRSAMFVVNELLIAKGRSLDKITQAQTIKTY
PGLAKDLGKLAASQYLAEIVLCQALSEQPQEELYELLNEHLHRLEELPKGESFGVLAYLAHAVFHLLALAGLTPQVQICC
LTQRSLTPDFADPNWRVGFSIASGGIVCLEAWEGLRKEARKESKEKSLPHPVTPAYQTVVHRQEIPVISARLNSVELGML
QQLSQPEIMQINTTSDASWLSVEQILRQYAQYHLGRPIRSATLIDSYFAANHDATV

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 32729; Mature: 32729

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTYKATGINLKAQAMGESDRIVTILTQEFGLIRAIAPGSRKHNSSLGGRSAMFVVNEL
CCCCEEECCCCEEEECCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHH
LIAKGRSLDKITQAQTIKTYPGLAKDLGKLAASQYLAEIVLCQALSEQPQEELYELLNEH
HHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LHRLEELPKGESFGVLAYLAHAVFHLLALAGLTPQVQICCLTQRSLTPDFADPNWRVGFS
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEE
IASGGIVCLEAWEGLRKEARKESKEKSLPHPVTPAYQTVVHRQEIPVISARLNSVELGML
ECCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHCHHHHHHH
QQLSQPEIMQINTTSDASWLSVEQILRQYAQYHLGRPIRSATLIDSYFAANHDATV
HHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNKTYKATGINLKAQAMGESDRIVTILTQEFGLIRAIAPGSRKHNSSLGGRSAMFVVNEL
CCCCEEECCCCEEEECCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHH
LIAKGRSLDKITQAQTIKTYPGLAKDLGKLAASQYLAEIVLCQALSEQPQEELYELLNEH
HHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LHRLEELPKGESFGVLAYLAHAVFHLLALAGLTPQVQICCLTQRSLTPDFADPNWRVGFS
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEE
IASGGIVCLEAWEGLRKEARKESKEKSLPHPVTPAYQTVVHRQEIPVISARLNSVELGML
ECCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHCHHHHHHH
QQLSQPEIMQINTTSDASWLSVEQILRQYAQYHLGRPIRSATLIDSYFAANHDATV
HHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA