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The map label for this gene is dmnC [H]

Identifier: 17231665

GI number: 17231665

Start: 5020877

End: 5022034

Strand: Direct

Name: dmnC [H]

Synonym: alr4173

Alternate gene names: 17231665

Gene position: 5020877-5022034 (Clockwise)

Preceding gene: 17231664

Following gene: 17231666

Centisome position: 78.28

GC content: 34.02

Gene sequence:

>1158_bases
ATGAGTGTTAAACCGCAAGTATTCTCATTTTTTGCTGGTTCAGGATTTCTGGATTTAGGGTTTGAAACAAGTGGATTTAA
TATTGTCTACGTGAATGAAATTTTCTCCCCCTTTATGGCAGCATATCGCTATTTGAGGGAGATATTAAATTTACCCTTAT
CAGAATATGGATATTATCAAGGGGACACGGCAGATGTTTCTAAGTTGGTAGAAGGTTTCCCCGGAAAATATCTGTTAGAT
TGGGTTCAAGAATGTCGTAAATCTAATAATATTGTTGGCTTTATTGGCGGGCCTCCCTGTCCTGATTTTTCTATTGGGGG
CAAAAATAGGGGTTGTTTAGGTGAAAATGGTAAGCTTTCTTCAGCTTATATAGAATTAATTTGTCAAAATTTACCAGATT
TCTTTTTATTTGAAAATGTCAAAGGTTTATGGCGGACTAAAAAACATCGTCAGTTTTTTGAAGCCTTAAAAAGAAAATTA
GTGGATTCAGGTTATCTATTAACCGAAAGGGTAATCAATGCTATTGAATATGGTGTACCACAAGATAGAGAAAGAATAAT
TTTATTGGGTTTTAGTAAAAGTTTTATTCATGATTTTTGGAACATAAATAGTGCTAATGAAAAACTGCTTGACTTTGTTT
TCCCTTGGGAAAATAAAGTTTTATATCCTAAAGAAAAAGTGTTTGCTTATCCGTGGATTCAGGTTGAACCATTTAGAGAA
AATTCTCTAATTCCTTGCCCTAATGGGATTCCTCAAGAATTAACGGTTGAATATTGGTTTAGAAAAAATAATGTAATAAA
CCATCCTAATTCTCAACATTATTTTCAACCAAGGGCAGGTATTCTCAAATTTGCCAGTGTTGCAGAAGGAGATGATTCTA
AGAAATCTTTTAAACGTCTACATAGATGGCGTTACTCTCCTACAGCTTGTTATGGCAATAATGAAGTGCATTTACACCCT
TACAAAATACGGCGAATTTCTGTAGCAGAAGCTTTGGCTATACAGTCTTTACCTGCCAAGTTTGCTTTACCAGAAAATAT
GTCACTAACTAATATGTTTAAAACTATTGGTAATGGTGTGCCATATTTAGCATCCAAAGCGTTGGCTGAGTCTATTCTTG
ATTTCCTAAATACTGGTATCAAAAAGCAACTACAATAA

Upstream 100 bases:

>100_bases
GAATCTTGCGTCTTTGTGCTGTTAAGTAATATCAAGTTCTGATAATTGCTTATAAGAAGATACTCAATCGCCTAATGTTA
TTAAATTATTCAATTCATAA

Downstream 100 bases:

>100_bases
TGCTGAAACTCCAATTATTGCCAAGTTAAATAAAATACTTATGTGGCTTTATAAACACACAATGATTTGGTAAACAAAAC
TCAAAAACACCTGCTTTTCC

Product: cytosine-specific DNA methyltransferase

Products: NA

Alternate protein names: M.NmeDIP; Cytosine-specific methyltransferase NmeDIP [H]

Number of amino acids: Translated: 385; Mature: 384

Protein sequence:

>385_residues
MSVKPQVFSFFAGSGFLDLGFETSGFNIVYVNEIFSPFMAAYRYLREILNLPLSEYGYYQGDTADVSKLVEGFPGKYLLD
WVQECRKSNNIVGFIGGPPCPDFSIGGKNRGCLGENGKLSSAYIELICQNLPDFFLFENVKGLWRTKKHRQFFEALKRKL
VDSGYLLTERVINAIEYGVPQDRERIILLGFSKSFIHDFWNINSANEKLLDFVFPWENKVLYPKEKVFAYPWIQVEPFRE
NSLIPCPNGIPQELTVEYWFRKNNVINHPNSQHYFQPRAGILKFASVAEGDDSKKSFKRLHRWRYSPTACYGNNEVHLHP
YKIRRISVAEALAIQSLPAKFALPENMSLTNMFKTIGNGVPYLASKALAESILDFLNTGIKKQLQ

Sequences:

>Translated_385_residues
MSVKPQVFSFFAGSGFLDLGFETSGFNIVYVNEIFSPFMAAYRYLREILNLPLSEYGYYQGDTADVSKLVEGFPGKYLLD
WVQECRKSNNIVGFIGGPPCPDFSIGGKNRGCLGENGKLSSAYIELICQNLPDFFLFENVKGLWRTKKHRQFFEALKRKL
VDSGYLLTERVINAIEYGVPQDRERIILLGFSKSFIHDFWNINSANEKLLDFVFPWENKVLYPKEKVFAYPWIQVEPFRE
NSLIPCPNGIPQELTVEYWFRKNNVINHPNSQHYFQPRAGILKFASVAEGDDSKKSFKRLHRWRYSPTACYGNNEVHLHP
YKIRRISVAEALAIQSLPAKFALPENMSLTNMFKTIGNGVPYLASKALAESILDFLNTGIKKQLQ
>Mature_384_residues
SVKPQVFSFFAGSGFLDLGFETSGFNIVYVNEIFSPFMAAYRYLREILNLPLSEYGYYQGDTADVSKLVEGFPGKYLLDW
VQECRKSNNIVGFIGGPPCPDFSIGGKNRGCLGENGKLSSAYIELICQNLPDFFLFENVKGLWRTKKHRQFFEALKRKLV
DSGYLLTERVINAIEYGVPQDRERIILLGFSKSFIHDFWNINSANEKLLDFVFPWENKVLYPKEKVFAYPWIQVEPFREN
SLIPCPNGIPQELTVEYWFRKNNVINHPNSQHYFQPRAGILKFASVAEGDDSKKSFKRLHRWRYSPTACYGNNEVHLHPY
KIRRISVAEALAIQSLPAKFALPENMSLTNMFKTIGNGVPYLASKALAESILDFLNTGIKKQLQ

Specific function: This methylase recognizes a double-stranded sequence, causes specific methylation on a C on both strands, and protects the DNA from cleavage by the NmeDIP endonuclease [H]

COG id: COG0270

COG function: function code L; Site-specific DNA methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the C5-methyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001525 [H]

Pfam domain/function: PF00145 DNA_methylase [H]

EC number: =2.1.1.37 [H]

Molecular weight: Translated: 44157; Mature: 44026

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVKPQVFSFFAGSGFLDLGFETSGFNIVYVNEIFSPFMAAYRYLREILNLPLSEYGYYQ
CCCCCHHHHHHCCCCEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC
GDTADVSKLVEGFPGKYLLDWVQECRKSNNIVGFIGGPPCPDFSIGGKNRGCLGENGKLS
CCHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHH
SAYIELICQNLPDFFLFENVKGLWRTKKHRQFFEALKRKLVDSGYLLTERVINAIEYGVP
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
QDRERIILLGFSKSFIHDFWNINSANEKLLDFVFPWENKVLYPKEKVFAYPWIQVEPFRE
CCCCEEEEEECCHHHHHHHHCCCCCCHHHHHEECCCCCCEECCHHHEEECCCEEEECCCC
NSLIPCPNGIPQELTVEYWFRKNNVINHPNSQHYFQPRAGILKFASVAEGDDSKKSFKRL
CCCCCCCCCCCHHHEEEEEEECCCCCCCCCCCCEECCCHHHHHHHHHHCCCCHHHHHHHH
HRWRYSPTACYGNNEVHLHPYKIRRISVAEALAIQSLPAKFALPENMSLTNMFKTIGNGV
HHHCCCCCEEECCCEEEECCHHEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCC
PYLASKALAESILDFLNTGIKKQLQ
CHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SVKPQVFSFFAGSGFLDLGFETSGFNIVYVNEIFSPFMAAYRYLREILNLPLSEYGYYQ
CCCCHHHHHHCCCCEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC
GDTADVSKLVEGFPGKYLLDWVQECRKSNNIVGFIGGPPCPDFSIGGKNRGCLGENGKLS
CCHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHH
SAYIELICQNLPDFFLFENVKGLWRTKKHRQFFEALKRKLVDSGYLLTERVINAIEYGVP
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
QDRERIILLGFSKSFIHDFWNINSANEKLLDFVFPWENKVLYPKEKVFAYPWIQVEPFRE
CCCCEEEEEECCHHHHHHHHCCCCCCHHHHHEECCCCCCEECCHHHEEECCCEEEECCCC
NSLIPCPNGIPQELTVEYWFRKNNVINHPNSQHYFQPRAGILKFASVAEGDDSKKSFKRL
CCCCCCCCCCCHHHEEEEEEECCCCCCCCCCCCEECCCHHHHHHHHHHCCCCHHHHHHHH
HRWRYSPTACYGNNEVHLHPYKIRRISVAEALAIQSLPAKFALPENMSLTNMFKTIGNGV
HHHCCCCCEEECCCEEEECCHHEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCC
PYLASKALAESILDFLNTGIKKQLQ
CHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10671450 [H]