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The map label for this gene is ybeB [C]

Identifier: 17231661

GI number: 17231661

Start: 5017060

End: 5017518

Strand: Direct

Name: ybeB [C]

Synonym: alr4169

Alternate gene names: 17231661

Gene position: 5017060-5017518 (Clockwise)

Preceding gene: 17231660

Following gene: 17231662

Centisome position: 78.22

GC content: 45.97

Gene sequence:

>459_bases
ATGTCTGATTATTTCCAAGGAAATTTACCATTACAATCCGTCTCGGTAGCCAAGAGCGCTATTAGGAGTCCACAGGCTGA
AACTGAGTCTAGTGGAGAATTAGCTCTAACCATTGCCGAAGCAGCATCAGACCGCAAAGCTGGCGATATTCTAGTGCTGA
GAGTAGCAGATGTCTCTTACTTAGCAGATTACTTTGTGATGTTGACTGGCTATTCTAAGGTGCAAGTGAGAGCGATCGCC
GATGCAATTCAACATGAAGTAGAAACCAAGTGGCAACGACGGCCACTGCGGACAGAAGGCAAAGTGGAAGGCAGTTGGGT
ACTGCAAGACTATGGCGACATCATCGTGCATATCATGATGCCAAAGGAACGGGAGTTTTATAATTTAGAAGCATTCTGGG
TTCATGCAGAACGCATCCCCCTACCAAAATCTGATGAGGATGAAGGTAACCCAACATGA

Upstream 100 bases:

>100_bases
TTAGTATTCAAAAAAACCAATAGATAGATTTACTGCTCAATTGTTGTTTGTAAGTAATTCTCAAAAACCGTAACAAAAGG
GATAAAGCACCTGAGGTTTA

Downstream 100 bases:

>100_bases
TGAAGTCGTCGCTGGCAAATTGTCCGGTTCCCGTAGACCAACAACCACTGAATGAGTACGAAGAGTTAAAAACTTCCTGG
CTGTTTCGTGATTGCGCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: Iojap-Related Protein; Iojap Family Protein; Iojap Protein; Iojap Superfamily Protein; Iojap Domain-Containing Protein; Iojap Domain Protein; Poly(A) Polymerase PcnB; Iojap-Like Protein Protein; Iojap Superfamily Ortholog; Conserved Protein; Iojap-Like Family Protein; Iojap Like Protein; Iojap Protein -Like Protein; YqeL Protein

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MSDYFQGNLPLQSVSVAKSAIRSPQAETESSGELALTIAEAASDRKAGDILVLRVADVSYLADYFVMLTGYSKVQVRAIA
DAIQHEVETKWQRRPLRTEGKVEGSWVLQDYGDIIVHIMMPKEREFYNLEAFWVHAERIPLPKSDEDEGNPT

Sequences:

>Translated_152_residues
MSDYFQGNLPLQSVSVAKSAIRSPQAETESSGELALTIAEAASDRKAGDILVLRVADVSYLADYFVMLTGYSKVQVRAIA
DAIQHEVETKWQRRPLRTEGKVEGSWVLQDYGDIIVHIMMPKEREFYNLEAFWVHAERIPLPKSDEDEGNPT
>Mature_151_residues
SDYFQGNLPLQSVSVAKSAIRSPQAETESSGELALTIAEAASDRKAGDILVLRVADVSYLADYFVMLTGYSKVQVRAIAD
AIQHEVETKWQRRPLRTEGKVEGSWVLQDYGDIIVHIMMPKEREFYNLEAFWVHAERIPLPKSDEDEGNPT

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081768, Length=96, Percent_Identity=34.375, Blast_Score=64, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17100; Mature: 16969

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDYFQGNLPLQSVSVAKSAIRSPQAETESSGELALTIAEAASDRKAGDILVLRVADVSY
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCHHH
LADYFVMLTGYSKVQVRAIADAIQHEVETKWQRRPLRTEGKVEGSWVLQDYGDIIVHIMM
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEEC
PKEREFYNLEAFWVHAERIPLPKSDEDEGNPT
CCCCCEEEEEEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SDYFQGNLPLQSVSVAKSAIRSPQAETESSGELALTIAEAASDRKAGDILVLRVADVSY
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCHHH
LADYFVMLTGYSKVQVRAIADAIQHEVETKWQRRPLRTEGKVEGSWVLQDYGDIIVHIMM
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEEC
PKEREFYNLEAFWVHAERIPLPKSDEDEGNPT
CCCCCEEEEEEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA