Click here to switch to the map view.

The map label for this gene is wcaI [H]

Identifier: 17231660

GI number: 17231660

Start: 5015231

End: 5016502

Strand: Direct

Name: wcaI [H]

Synonym: alr4168

Alternate gene names: 17231660

Gene position: 5015231-5016502 (Clockwise)

Preceding gene: 17231659

Following gene: 17231661

Centisome position: 78.19

GC content: 41.59

Gene sequence:

>1272_bases
ATGCGGATTTTAATTTACTCATATAACTACTATCCAGAACCAATTGGTATAGCTCCCCTAATGACAGAATTAGCAGAGGG
ACTGGCCAAGAGAGGACATGAAGTGCGTGTGGTCACTGCTATGCCTAACTACCCTGAACGCAGAATTTACGAGGCTTACC
GGGGTAAATGGTATCTGACAGAATATAAGAATGGTGTCAAAATCCAACGTAGTTACGTGTGGATTCGTCCCCAACCGAAA
TTATTAGACCGAGTATTGCTAGATGCTAGTTTCGTAGTCACGAGTTTTTTCCCTGCTCTGTTCGGGTGGCGGCCTGATGT
GATTTTGTCAACTTCACCATCACTACCCGTGTGCATACCAGCATCTTTACTAGGATGGTTGCGTGCTTGTCCTGTGGTCT
TGAATTTACAAGATATATTACCAGAAGCAGCCATTCATGTTGGTTTACTGAAAAACAAATGGCTAATTAAGGTATTCTCC
CTATTAGAAAAATTTGCCTATCGTCATGCTACTAAAATTAGCGTTATTGCTGATGGCTTTGTAGAAAATCTCCTCTCCAA
AGGTATATCGCCTGACAAAATAGAGCAAATACCCAACTGGGTTGATGTGAATTTTATTCGTCCCTTACCAAAAGACAGTA
ATAATTTTCGGAATAGTCATAATCTGCACAACAAATTTGTTGTCCTCTACTCTGGCAATATTGCTCTCACCCAAGGTTTA
GAAACGGTCATTCAAGCTGCCGCGAAGTTGCGCGATTTCGCCGAAATTTCCTTTGTAATTGCAGGTGAGGCTAAGGGTTT
AGAAAGACTGCAAAAGTATTGTACAAACTGCGGTGCTGATAACGTCTTGTTACTACCTTTTCAACCACGAGAACATTTAC
CAGAAATGTTGGCGGCGGCGGATGTTGGGTTAGTGGTGCAGAAAAAAAATGTGATTTCTTTTAATATGCCATCAAAGATT
CAAGTCTTATTGGCTAGTGGCAGGGCATTGATAGCGTCTGTACCTGATAAAGGCACCGCAGCCAAGGCAATTAAACAGAG
TGGTGGCGGTATTGTGGTTCCCCCAGAAGACCCTCAAGCTTTAGCAACGGCAATTTTAGACTTATACAAACATCCCGAAA
AGGCTAAAACTTTGGGCTATAACAGTCGGAAGTATGCTGTGGAACAATATGCTTTTGAGCAAGCATTAAATCAATATGAA
AATTTATTTTACTCAGTGACAACAGAAGGCCAAACAATCCCATCCAAAGTAGTTTCCAAGCAGGAAGTATGA

Upstream 100 bases:

>100_bases
TATAAAAGGGAAAATTAAGTATTAGATGCTTTCAAACATAAGCAATCTAGACCTTGCTTTAGTTATCCAAACCAGCCAGG
GGACTTCTGACTAATTTGTT

Downstream 100 bases:

>100_bases
ATCTCAAGCGTCAGACACTCTAGTCATAAAAATTAGTCGTAATTTTTGGGGTTGAGGATATTTTTATCTCCTTAGCCCTA
TTTTGTTGTCTTAATTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MRILIYSYNYYPEPIGIAPLMTELAEGLAKRGHEVRVVTAMPNYPERRIYEAYRGKWYLTEYKNGVKIQRSYVWIRPQPK
LLDRVLLDASFVVTSFFPALFGWRPDVILSTSPSLPVCIPASLLGWLRACPVVLNLQDILPEAAIHVGLLKNKWLIKVFS
LLEKFAYRHATKISVIADGFVENLLSKGISPDKIEQIPNWVDVNFIRPLPKDSNNFRNSHNLHNKFVVLYSGNIALTQGL
ETVIQAAAKLRDFAEISFVIAGEAKGLERLQKYCTNCGADNVLLLPFQPREHLPEMLAAADVGLVVQKKNVISFNMPSKI
QVLLASGRALIASVPDKGTAAKAIKQSGGGIVVPPEDPQALATAILDLYKHPEKAKTLGYNSRKYAVEQYAFEQALNQYE
NLFYSVTTEGQTIPSKVVSKQEV

Sequences:

>Translated_423_residues
MRILIYSYNYYPEPIGIAPLMTELAEGLAKRGHEVRVVTAMPNYPERRIYEAYRGKWYLTEYKNGVKIQRSYVWIRPQPK
LLDRVLLDASFVVTSFFPALFGWRPDVILSTSPSLPVCIPASLLGWLRACPVVLNLQDILPEAAIHVGLLKNKWLIKVFS
LLEKFAYRHATKISVIADGFVENLLSKGISPDKIEQIPNWVDVNFIRPLPKDSNNFRNSHNLHNKFVVLYSGNIALTQGL
ETVIQAAAKLRDFAEISFVIAGEAKGLERLQKYCTNCGADNVLLLPFQPREHLPEMLAAADVGLVVQKKNVISFNMPSKI
QVLLASGRALIASVPDKGTAAKAIKQSGGGIVVPPEDPQALATAILDLYKHPEKAKTLGYNSRKYAVEQYAFEQALNQYE
NLFYSVTTEGQTIPSKVVSKQEV
>Mature_423_residues
MRILIYSYNYYPEPIGIAPLMTELAEGLAKRGHEVRVVTAMPNYPERRIYEAYRGKWYLTEYKNGVKIQRSYVWIRPQPK
LLDRVLLDASFVVTSFFPALFGWRPDVILSTSPSLPVCIPASLLGWLRACPVVLNLQDILPEAAIHVGLLKNKWLIKVFS
LLEKFAYRHATKISVIADGFVENLLSKGISPDKIEQIPNWVDVNFIRPLPKDSNNFRNSHNLHNKFVVLYSGNIALTQGL
ETVIQAAAKLRDFAEISFVIAGEAKGLERLQKYCTNCGADNVLLLPFQPREHLPEMLAAADVGLVVQKKNVISFNMPSKI
QVLLASGRALIASVPDKGTAAKAIKQSGGGIVVPPEDPQALATAILDLYKHPEKAKTLGYNSRKYAVEQYAFEQALNQYE
NLFYSVTTEGQTIPSKVVSKQEV

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788363, Length=410, Percent_Identity=34.390243902439, Blast_Score=188, Evalue=6e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 47297; Mature: 47297

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILIYSYNYYPEPIGIAPLMTELAEGLAKRGHEVRVVTAMPNYPERRIYEAYRGKWYLT
CEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCEEEE
EYKNGVKIQRSYVWIRPQPKLLDRVLLDASFVVTSFFPALFGWRPDVILSTSPSLPVCIP
ECCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEH
ASLLGWLRACPVVLNLQDILPEAAIHVGLLKNKWLIKVFSLLEKFAYRHATKISVIADGF
HHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VENLLSKGISPDKIEQIPNWVDVNFIRPLPKDSNNFRNSHNLHNKFVVLYSGNIALTQGL
HHHHHHCCCCHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCEEEHHHH
ETVIQAAAKLRDFAEISFVIAGEAKGLERLQKYCTNCGADNVLLLPFQPREHLPEMLAAA
HHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHH
DVGLVVQKKNVISFNMPSKIQVLLASGRALIASVPDKGTAAKAIKQSGGGIVVPPEDPQA
CCCEEEEECCEEEECCCCCEEEEEECCCEEEEECCCCCHHHHHHHHCCCCEEECCCCHHH
LATAILDLYKHPEKAKTLGYNSRKYAVEQYAFEQALNQYENLFYSVTTEGQTIPSKVVSK
HHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHC
QEV
CCC
>Mature Secondary Structure
MRILIYSYNYYPEPIGIAPLMTELAEGLAKRGHEVRVVTAMPNYPERRIYEAYRGKWYLT
CEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCEEEE
EYKNGVKIQRSYVWIRPQPKLLDRVLLDASFVVTSFFPALFGWRPDVILSTSPSLPVCIP
ECCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEH
ASLLGWLRACPVVLNLQDILPEAAIHVGLLKNKWLIKVFSLLEKFAYRHATKISVIADGF
HHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VENLLSKGISPDKIEQIPNWVDVNFIRPLPKDSNNFRNSHNLHNKFVVLYSGNIALTQGL
HHHHHHCCCCHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCEEEHHHH
ETVIQAAAKLRDFAEISFVIAGEAKGLERLQKYCTNCGADNVLLLPFQPREHLPEMLAAA
HHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHH
DVGLVVQKKNVISFNMPSKIQVLLASGRALIASVPDKGTAAKAIKQSGGGIVVPPEDPQA
CCCEEEEECCEEEECCCCCEEEEEECCCEEEEECCCCCHHHHHHHHCCCCEEECCCCHHH
LATAILDLYKHPEKAKTLGYNSRKYAVEQYAFEQALNQYENLFYSVTTEGQTIPSKVVSK
HHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHC
QEV
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7815923; 8759852; 9097040; 9278503 [H]