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The map label for this gene is ybgC [C]

Identifier: 17231571

GI number: 17231571

Start: 4910728

End: 4911228

Strand: Direct

Name: ybgC [C]

Synonym: alr4079

Alternate gene names: 17231571

Gene position: 4910728-4911228 (Clockwise)

Preceding gene: 17231569

Following gene: 17231574

Centisome position: 76.57

GC content: 44.71

Gene sequence:

>501_bases
ATGTCTGACGAACAATCAAACCAAGCCCAATTACCACCAACCAACGCCATCCAAGTTTCATCATTACGTCAGTTCGATAG
TTGGTTTGAGTATCCCGTGAGAGTTCATCCCCACCATACAGACTATGCGGGTATTGTTTGGCATGGTACCTATTTAACTT
GGATGGAAGAAGCCAGAGTAGAATGTTTGCGCTCCATTGGCATTGAGTTTGCTGATTTAGTTGCCTTAGGCTGCGACTTA
CCAGTAGTAGAACTTTCTATCCGCTATCATCGTTCAGTTCAGTTAGGTATGGCAGTGGTGGTAAAAGCGCGGATGATAGA
TGTGACTGGTGTCCGGATCAACTGGGATTACGCTATTGTCTCCACTGATGGACAGCAACTATTTGTTACTGCCAAAGTGA
CATTAGTGGCTTTGGATAGAGATAGGGGGAAAATCATGCGTCAGTTACCCAGCAACGTCAAGGATGCCTTGGCAAAGGTT
TCTGCTTTACACAATAACTAA

Upstream 100 bases:

>100_bases
TTAGGAGTTTAAACCTTATTAATTGAATAAATTCTACAATGCGACGCTTTTTTATGTTATTCCAGATTTGGAAAAACTTA
AGTTGCTCAAAAACAAGAAG

Downstream 100 bases:

>100_bases
TCGGGGATTGGGGATGGAGAATCCAAGAGGTTTTACACTCTTGATATTTGTGGAGTCAAACCTATCTCATACCCTCCCTG
CCAATACAAAAAGGGCGACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MSDEQSNQAQLPPTNAIQVSSLRQFDSWFEYPVRVHPHHTDYAGIVWHGTYLTWMEEARVECLRSIGIEFADLVALGCDL
PVVELSIRYHRSVQLGMAVVVKARMIDVTGVRINWDYAIVSTDGQQLFVTAKVTLVALDRDRGKIMRQLPSNVKDALAKV
SALHNN

Sequences:

>Translated_166_residues
MSDEQSNQAQLPPTNAIQVSSLRQFDSWFEYPVRVHPHHTDYAGIVWHGTYLTWMEEARVECLRSIGIEFADLVALGCDL
PVVELSIRYHRSVQLGMAVVVKARMIDVTGVRINWDYAIVSTDGQQLFVTAKVTLVALDRDRGKIMRQLPSNVKDALAKV
SALHNN
>Mature_165_residues
SDEQSNQAQLPPTNAIQVSSLRQFDSWFEYPVRVHPHHTDYAGIVWHGTYLTWMEEARVECLRSIGIEFADLVALGCDLP
VVELSIRYHRSVQLGMAVVVKARMIDVTGVRINWDYAIVSTDGQQLFVTAKVTLVALDRDRGKIMRQLPSNVKDALAKVS
ALHNN

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 18719; Mature: 18587

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS01328 4HBCOA_THIOESTERASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDEQSNQAQLPPTNAIQVSSLRQFDSWFEYPVRVHPHHTDYAGIVWHGTYLTWMEEARV
CCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCEEECCCCCCCEEEEEECHHHHHHHHHHH
ECLRSIGIEFADLVALGCDLPVVELSIRYHRSVQLGMAVVVKARMIDVTGVRINWDYAIV
HHHHHCCCCHHHHHHHCCCCCEEEEEEEECCCHHHHHHHEEEEEEEEEEEEEEEEEEEEE
STDGQQLFVTAKVTLVALDRDRGKIMRQLPSNVKDALAKVSALHNN
ECCCCEEEEEEEEEEEEEECCHHHHHHHCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDEQSNQAQLPPTNAIQVSSLRQFDSWFEYPVRVHPHHTDYAGIVWHGTYLTWMEEARV
CCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCEEECCCCCCCEEEEEECHHHHHHHHHHH
ECLRSIGIEFADLVALGCDLPVVELSIRYHRSVQLGMAVVVKARMIDVTGVRINWDYAIV
HHHHHCCCCHHHHHHHCCCCCEEEEEEEECCCHHHHHHHEEEEEEEEEEEEEEEEEEEEE
STDGQQLFVTAKVTLVALDRDRGKIMRQLPSNVKDALAKVSALHNN
ECCCCEEEEEEEEEEEEEECCHHHHHHHCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]