Click here to switch to the map view.

The map label for this gene is ycaL [C]

Identifier: 17231566

GI number: 17231566

Start: 4903942

End: 4904904

Strand: Reverse

Name: ycaL [C]

Synonym: all4074

Alternate gene names: 17231566

Gene position: 4904904-4903942 (Counterclockwise)

Preceding gene: 17231570

Following gene: 17231565

Centisome position: 76.47

GC content: 43.72

Gene sequence:

>963_bases
ATGCCAACTTACACAGGAATTTCCAGCGAAGCCTTCAGACATCCACTGGATCGCCAAGCCGAGCAAGCTTTGCGAAATCT
ACCAGGATTTGATTTGATTGCTCGTAAATTTGTGGAATTTGTCTACGAACGCCCTCAGCTAGTCTATCTAATGGGCAACA
CCATCCAAGTAGGGCCTCGGCAATATTCCACTATTTACCAGATGTTTCGGGAGTGTGTGCGGGATTTGGATATTTATCCA
GAACCTACACTGTTTGTTTCACAAAATCCTCAGGCAAATAGCTACGCATTAGGTCAAGAGAATCCTTACATAGTCATAAA
TACAGGGATACTAGACTTGCTCAACGAAGCCGAAATTCGGGCGGTGTTAGCCCATGAACTGGGACATATTAAATGTGGCC
ATACTATTCTAATTCAAATGGCGATGTGGGCGATGAGTGCGGCTTCAGCCTTAGGAGAATTAACCTTTGGCATTGGTAAT
TTTGTCTCTCAAGCCTTGATTTATGCGTTTTTTGAGTGGCGGCGCAAGGCTGAGTTAACGGCAGATAGAGCAGCGCTGTT
GGTGGTTGATGACCTAAATACTGTTTTATCGTCAATGATGAAGATTTCTGGCGGTAGCAGCAAATATGCCAATGAATGCA
GTTTGCAGGAGTTTATTAAGCAGTCCGAAAATTATCAGGCATTAGACGAAGATGGGCTAAATCAAGTGTATAAATTCTTA
ATGTACAACGGCGCTCAAGGCATGATGTTAAGCCATCCGTTCGCTGTAGAAAGAGTCCAATACCTACAACAATGGGCAGT
ATCCTCAGAATATCAACAAATTCGCCAAGGTAATTACCAGCGATCGCCTGCCTCTGGTTCTGTAGACGTGAAAGCCTCTA
CCGCCGAAGCTGAAGCCGAAAGATTACGCCGCCAAATTGAAGAATTACAACAAGAAATTAACAAAATGAAACGGTCTGAC
TAA

Upstream 100 bases:

>100_bases
TCTATTATCTCTTTTGTCAGTTGTTGGTTGTCAGTTGTCAGTTGCATTCATACTGACCACTAACTACTGACTACTGACCA
CTAACCCATTACCCTGAATT

Downstream 100 bases:

>100_bases
TGGTGATGGGTAATTGGTAATTGGATATATATGCTAGTTCCCAATCCCCAATCCCTGATTTCATAAAACAGTCATCTAAG
AGACTCCGTTGTTTCCCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: M48 Family Peptidase; Peptidase M; M48A Family Peptidase; Zn-Dependent Protease; Zn-Dependent Protease With Chaperone Function; Metallopeptidase; Protease; Zn-Dependent Protease With Chaperone Function-Like Protein

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MPTYTGISSEAFRHPLDRQAEQALRNLPGFDLIARKFVEFVYERPQLVYLMGNTIQVGPRQYSTIYQMFRECVRDLDIYP
EPTLFVSQNPQANSYALGQENPYIVINTGILDLLNEAEIRAVLAHELGHIKCGHTILIQMAMWAMSAASALGELTFGIGN
FVSQALIYAFFEWRRKAELTADRAALLVVDDLNTVLSSMMKISGGSSKYANECSLQEFIKQSENYQALDEDGLNQVYKFL
MYNGAQGMMLSHPFAVERVQYLQQWAVSSEYQQIRQGNYQRSPASGSVDVKASTAEAEAERLRRQIEELQQEINKMKRSD

Sequences:

>Translated_320_residues
MPTYTGISSEAFRHPLDRQAEQALRNLPGFDLIARKFVEFVYERPQLVYLMGNTIQVGPRQYSTIYQMFRECVRDLDIYP
EPTLFVSQNPQANSYALGQENPYIVINTGILDLLNEAEIRAVLAHELGHIKCGHTILIQMAMWAMSAASALGELTFGIGN
FVSQALIYAFFEWRRKAELTADRAALLVVDDLNTVLSSMMKISGGSSKYANECSLQEFIKQSENYQALDEDGLNQVYKFL
MYNGAQGMMLSHPFAVERVQYLQQWAVSSEYQQIRQGNYQRSPASGSVDVKASTAEAEAERLRRQIEELQQEINKMKRSD
>Mature_319_residues
PTYTGISSEAFRHPLDRQAEQALRNLPGFDLIARKFVEFVYERPQLVYLMGNTIQVGPRQYSTIYQMFRECVRDLDIYPE
PTLFVSQNPQANSYALGQENPYIVINTGILDLLNEAEIRAVLAHELGHIKCGHTILIQMAMWAMSAASALGELTFGIGNF
VSQALIYAFFEWRRKAELTADRAALLVVDDLNTVLSSMMKISGGSSKYANECSLQEFIKQSENYQALDEDGLNQVYKFLM
YNGAQGMMLSHPFAVERVQYLQQWAVSSEYQQIRQGNYQRSPASGSVDVKASTAEAEAERLRRQIEELQQEINKMKRSD

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.24.- [C]

Molecular weight: Translated: 36357; Mature: 36226

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTYTGISSEAFRHPLDRQAEQALRNLPGFDLIARKFVEFVYERPQLVYLMGNTIQVGPR
CCCCCCCCHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCEEEECCH
QYSTIYQMFRECVRDLDIYPEPTLFVSQNPQANSYALGQENPYIVINTGILDLLNEAEIR
HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEECCCCCCEEEEECCHHHHHHHHHHH
AVLAHELGHIKCGHTILIQMAMWAMSAASALGELTFGIGNFVSQALIYAFFEWRRKAELT
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ADRAALLVVDDLNTVLSSMMKISGGSSKYANECSLQEFIKQSENYQALDEDGLNQVYKFL
CCCEEEEEEHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHH
MYNGAQGMMLSHPFAVERVQYLQQWAVSSEYQQIRQGNYQRSPASGSVDVKASTAEAEAE
HHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECHHHHHHH
RLRRQIEELQQEINKMKRSD
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PTYTGISSEAFRHPLDRQAEQALRNLPGFDLIARKFVEFVYERPQLVYLMGNTIQVGPR
CCCCCCCHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCEEEECCH
QYSTIYQMFRECVRDLDIYPEPTLFVSQNPQANSYALGQENPYIVINTGILDLLNEAEIR
HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEECCCCCCEEEEECCHHHHHHHHHHH
AVLAHELGHIKCGHTILIQMAMWAMSAASALGELTFGIGNFVSQALIYAFFEWRRKAELT
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ADRAALLVVDDLNTVLSSMMKISGGSSKYANECSLQEFIKQSENYQALDEDGLNQVYKFL
CCCEEEEEEHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHH
MYNGAQGMMLSHPFAVERVQYLQQWAVSSEYQQIRQGNYQRSPASGSVDVKASTAEAEAE
HHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECHHHHHHH
RLRRQIEELQQEINKMKRSD
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA