| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231559
Identifier: 17231559
GI number: 17231559
Start: 4895449
End: 4895946
Strand: Direct
Name: 17231559
Synonym: alr4067
Alternate gene names: NA
Gene position: 4895449-4895946 (Clockwise)
Preceding gene: 17231558
Following gene: 17231560
Centisome position: 76.33
GC content: 45.58
Gene sequence:
>498_bases ATGATGCCCTGCTATAAATTGCCTCTGTCAAAAATGCGCCGTTTGGGATTAGCTTTGCTACTACCTGTGACTTTATTCGG TACGGTAGCCTTGCCTAACCAATTATCGAGCGTTACAGCACAAACCCCAGGGGGAAATCGCCCGCTTACGATTCGCTCTG ATATTCAAGAATACGATGCTAAAAATCAGGTGATCACTGCTCGTGGTAATGTGCAGATGTTGTATCCTGCTCGTCAAATT CAGGCGACATCTGCTCAAGCACAATATTTCAGCAAGGAACGCCGCATTGATTTTAGTGGTAATGTCTATATTTTGCAGCA AGGTGGCAATAGTATCCGCGCAGAAAAGGTAACATATTTGATTGATGAAGGCCGATTTGTGGCCTTACCTCAATCCAATC GCCAGGTAGAATCCATCTATATGATTGAAGAGTCGCAGCAGGGAGGCCAATCTAACGCACCCGCTCCGACAACACCAGTA TTACGACGTTCCAATTAG
Upstream 100 bases:
>100_bases TAGCGACTATCTCATGCTACTCCTGATAGGAGATTATATTTTAGGAGAAAGTACTTGAGATAATTAGTATACAAGCCAGA ATCCCGAATATTAAATTCCT
Downstream 100 bases:
>100_bases CATCAACCAACAAGACAGCACAGGCATAGTGAAAATTGTTTTAGAAAATATTCACAAGTCTTACGGCAAGAGAGTAATTG TCAATCGCGTTAATCTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: OstA-Like Protein
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MMPCYKLPLSKMRRLGLALLLPVTLFGTVALPNQLSSVTAQTPGGNRPLTIRSDIQEYDAKNQVITARGNVQMLYPARQI QATSAQAQYFSKERRIDFSGNVYILQQGGNSIRAEKVTYLIDEGRFVALPQSNRQVESIYMIEESQQGGQSNAPAPTTPV LRRSN
Sequences:
>Translated_165_residues MMPCYKLPLSKMRRLGLALLLPVTLFGTVALPNQLSSVTAQTPGGNRPLTIRSDIQEYDAKNQVITARGNVQMLYPARQI QATSAQAQYFSKERRIDFSGNVYILQQGGNSIRAEKVTYLIDEGRFVALPQSNRQVESIYMIEESQQGGQSNAPAPTTPV LRRSN >Mature_165_residues MMPCYKLPLSKMRRLGLALLLPVTLFGTVALPNQLSSVTAQTPGGNRPLTIRSDIQEYDAKNQVITARGNVQMLYPARQI QATSAQAQYFSKERRIDFSGNVYILQQGGNSIRAEKVTYLIDEGRFVALPQSNRQVESIYMIEESQQGGQSNAPAPTTPV LRRSN
Specific function: Unknown
COG id: COG1934
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18317; Mature: 18317
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPCYKLPLSKMRRLGLALLLPVTLFGTVALPNQLSSVTAQTPGGNRPLTIRSDIQEYDA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEECCCCCCCEEECCCHHHCCC KNQVITARGNVQMLYPARQIQATSAQAQYFSKERRIDFSGNVYILQQGGNSIRAEKVTYL CCCEEEECCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEECEEEEEEE IDEGRFVALPQSNRQVESIYMIEESQQGGQSNAPAPTTPVLRRSN EECCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEECCC >Mature Secondary Structure MMPCYKLPLSKMRRLGLALLLPVTLFGTVALPNQLSSVTAQTPGGNRPLTIRSDIQEYDA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEECCCCCCCEEECCCHHHCCC KNQVITARGNVQMLYPARQIQATSAQAQYFSKERRIDFSGNVYILQQGGNSIRAEKVTYL CCCEEEECCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEECEEEEEEE IDEGRFVALPQSNRQVESIYMIEESQQGGQSNAPAPTTPVLRRSN EECCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA