| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231526
Identifier: 17231526
GI number: 17231526
Start: 4859718
End: 4859936
Strand: Reverse
Name: 17231526
Synonym: asl4034
Alternate gene names: NA
Gene position: 4859936-4859718 (Counterclockwise)
Preceding gene: 17231527
Following gene: 17231518
Centisome position: 75.77
GC content: 42.92
Gene sequence:
>219_bases ATGTTCATTGATGAACTGTCACCCATATTCAAACAATTAGTCCAACATCCAGCCTCTTTTTTGGGTGGATTTGCCTCTGG AGTGTTGAGACTCAACTTGGCTGATGATCCCGTTAAAAGCTGGTTAGATAAGCAAAGAGGCGTTAACAGTTATTCTTTTC CCGTAACTGACGCACATAATGGCAAAGCCAGTGGCCCTCAGTCGATATCGATTGATTAG
Upstream 100 bases:
>100_bases TCAAGTAATGACTATTGGCTTCTCTGAAAACCTACCTGAATTTACACGTTAAGATTGATGAAGATTTGATATTTTTACAC CAACATCAGGAGAAATTTAA
Downstream 100 bases:
>100_bases GGACTGGGGATTGGGGACTGGGTGTAAGGGAGACGAAATACAGCAAATACACACTCACAACTCCCCACACCCCATTCTTA TGACCAATTACCCCACTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 72
Protein sequence:
>72_residues MFIDELSPIFKQLVQHPASFLGGFASGVLRLNLADDPVKSWLDKQRGVNSYSFPVTDAHNGKASGPQSISID
Sequences:
>Translated_72_residues MFIDELSPIFKQLVQHPASFLGGFASGVLRLNLADDPVKSWLDKQRGVNSYSFPVTDAHNGKASGPQSISID >Mature_72_residues MFIDELSPIFKQLVQHPASFLGGFASGVLRLNLADDPVKSWLDKQRGVNSYSFPVTDAHNGKASGPQSISID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0426 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y4034_NOSS1 (Q8YQ06)
Other databases:
- EMBL: BA000019 - PIR: AC2310 - RefSeq: NP_488074.1 - STRING: Q8YQ06 - GeneID: 1107632 - GenomeReviews: BA000019_GR - KEGG: ana:asl4034 - NMPDR: fig|103690.1.peg.4341 - eggNOG: NOG14680 - HOGENOM: HBG285419 - OMA: PVKSWLD - ProtClustDB: CLSK896104 - BioCyc: NSP103690:ASL4034-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7817; Mature: 7817
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFIDELSPIFKQLVQHPASFLGGFASGVLRLNLADDPVKSWLDKQRGVNSYSFPVTDAHN CCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCC GKASGPQSISID CCCCCCCCCCCC >Mature Secondary Structure MFIDELSPIFKQLVQHPASFLGGFASGVLRLNLADDPVKSWLDKQRGVNSYSFPVTDAHN CCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCC GKASGPQSISID CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11759840