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The map label for this gene is 17231501

Identifier: 17231501

GI number: 17231501

Start: 4829483

End: 4830322

Strand: Direct

Name: 17231501

Synonym: alr4009

Alternate gene names: NA

Gene position: 4829483-4830322 (Clockwise)

Preceding gene: 17231499

Following gene: 17231502

Centisome position: 75.3

GC content: 41.07

Gene sequence:

>840_bases
ATGCTTTTATTTTCGGCATCGGTGGTCATGTTGATTTTGTCGAACTTTGGCTATTGGCTTTGGCAATGGCCTCATTGGCT
ATGCTTCAGCACAAATACCCTAGCTTTACATTGTGCAGGGACAGTCATTCACGATGCTTGTCATCAATCTGCCCATCGTA
ATCGGATAATTAATGCCATGTTAGGTCATGGTAGCGCGTTGATATTGGCTTTTGCTTTTCCTGTGTTTACGCGGGTGCAT
TTGCAGCATCACGCCCATGTTAACCATCCCAAAGATGACCCAGATCATTACGTCTCTACAGGTGGGCCACTGTGGCTAAT
CGCTGTACGGTTTTTGTACCATGAGGTATTTTTCTTTCAAAGAAAGCTGTGGCGCAAATATGAACTGCTGGAGTGGTTTA
TCAGTCGCTTAATTGTCATTACAATTGTTTACATTTCCGTTCAATATCATTTCCTGGGCTACATTCTCAATTTTTGGTTT
ATCCCCGCATTCATAGTTGGTATAGCTTTAGGACTATTCTTTGATTATCTGCCCCATCGTCCTTTTGTGGAACGCGATCG
CTGGAAAAATGCCCGCGTCTACCCTGGAAAGTTACTCAACATCTTAATTATGGGGCAGAATTACCACCTAATTCATCATT
TATGGCCTTCTATCCCCTGGTATAACTATCAGCCAGCCTATTATGTAATGAAGCCACTGTTAGATGAGAAAGGCTGTTAT
CAAACTTCAGGATTGTTGCAGAAAAAAGATTTCTTTGAATTTGTGTATGACATCTTTTTAGGGATCAGATTTCACCATCA
CAAAGAAGAAAAAGTATCAAGTAATAATCTAGAGGCATAG

Upstream 100 bases:

>100_bases
GATCACAAAGGAGACACAAATGCTCTCATTGGAGGCACAGCAGTTACCAAAAATCCCACCAAAGGAATTTTTAGCGCCTC
CTGGTGATTTTAACCCCACG

Downstream 100 bases:

>100_bases
CGTGATCGCCACTTTGTATGTCCACCCCCCCTTATATTCAACTCAATACTGTTCTGCAAAACTTCGCAGATATTCCAGCA
GATGAAATTCAAAAGTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Fatty Acid Desaturase; Fatty Acid Desaturase Domain Protein; Electron Transfer Protein FdxB; Beta-Carotene Oxygenase CrtR; Phenylacetic Acid Degradation Oxidoreductase; Fatty Acid Desaturase Subfamily; Beta Carotene Hydroxylase; Phthalate 4 5-Dioxygenase; B-Carotene Hydroxylase; Delta(12)-Fatty Acid Dehydrogenase

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MLLFSASVVMLILSNFGYWLWQWPHWLCFSTNTLALHCAGTVIHDACHQSAHRNRIINAMLGHGSALILAFAFPVFTRVH
LQHHAHVNHPKDDPDHYVSTGGPLWLIAVRFLYHEVFFFQRKLWRKYELLEWFISRLIVITIVYISVQYHFLGYILNFWF
IPAFIVGIALGLFFDYLPHRPFVERDRWKNARVYPGKLLNILIMGQNYHLIHHLWPSIPWYNYQPAYYVMKPLLDEKGCY
QTSGLLQKKDFFEFVYDIFLGIRFHHHKEEKVSSNNLEA

Sequences:

>Translated_279_residues
MLLFSASVVMLILSNFGYWLWQWPHWLCFSTNTLALHCAGTVIHDACHQSAHRNRIINAMLGHGSALILAFAFPVFTRVH
LQHHAHVNHPKDDPDHYVSTGGPLWLIAVRFLYHEVFFFQRKLWRKYELLEWFISRLIVITIVYISVQYHFLGYILNFWF
IPAFIVGIALGLFFDYLPHRPFVERDRWKNARVYPGKLLNILIMGQNYHLIHHLWPSIPWYNYQPAYYVMKPLLDEKGCY
QTSGLLQKKDFFEFVYDIFLGIRFHHHKEEKVSSNNLEA
>Mature_279_residues
MLLFSASVVMLILSNFGYWLWQWPHWLCFSTNTLALHCAGTVIHDACHQSAHRNRIINAMLGHGSALILAFAFPVFTRVH
LQHHAHVNHPKDDPDHYVSTGGPLWLIAVRFLYHEVFFFQRKLWRKYELLEWFISRLIVITIVYISVQYHFLGYILNFWF
IPAFIVGIALGLFFDYLPHRPFVERDRWKNARVYPGKLLNILIMGQNYHLIHHLWPSIPWYNYQPAYYVMKPLLDEKGCY
QTSGLLQKKDFFEFVYDIFLGIRFHHHKEEKVSSNNLEA

Specific function: Unknown

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.14.13.-

Molecular weight: Translated: 33175; Mature: 33175

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLFSASVVMLILSNFGYWLWQWPHWLCFSTNTLALHCAGTVIHDACHQSAHRNRIINAM
CEEEHHHHHHHHHHHCCCEECCCCCEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHH
LGHGSALILAFAFPVFTRVHLQHHAHVNHPKDDPDHYVSTGGPLWLIAVRFLYHEVFFFQ
HCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHH
RKLWRKYELLEWFISRLIVITIVYISVQYHFLGYILNFWFIPAFIVGIALGLFFDYLPHR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PFVERDRWKNARVYPGKLLNILIMGQNYHLIHHLWPSIPWYNYQPAYYVMKPLLDEKGCY
CCCCHHCCCCCCCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCC
QTSGLLQKKDFFEFVYDIFLGIRFHHHKEEKVSSNNLEA
HHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCC
>Mature Secondary Structure
MLLFSASVVMLILSNFGYWLWQWPHWLCFSTNTLALHCAGTVIHDACHQSAHRNRIINAM
CEEEHHHHHHHHHHHCCCEECCCCCEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHH
LGHGSALILAFAFPVFTRVHLQHHAHVNHPKDDPDHYVSTGGPLWLIAVRFLYHEVFFFQ
HCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHH
RKLWRKYELLEWFISRLIVITIVYISVQYHFLGYILNFWFIPAFIVGIALGLFFDYLPHR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PFVERDRWKNARVYPGKLLNILIMGQNYHLIHHLWPSIPWYNYQPAYYVMKPLLDEKGCY
CCCCHHCCCCCCCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCC
QTSGLLQKKDFFEFVYDIFLGIRFHHHKEEKVSSNNLEA
HHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA