| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231497
Identifier: 17231497
GI number: 17231497
Start: 4823654
End: 4824910
Strand: Direct
Name: 17231497
Synonym: alr4005
Alternate gene names: NA
Gene position: 4823654-4824910 (Clockwise)
Preceding gene: 17231496
Following gene: 17231499
Centisome position: 75.21
GC content: 44.23
Gene sequence:
>1257_bases ATGAATCCAGTAGATATTCTTATTCTTTCCAATGGGCCTGGTGAGGTAACAACCTGGGTACGTCCTGTAGTTAAAGCTTT ACGTGAAAAACTGAGTGATGACCGTGTTCAAGTCAGGATTTCTGTAATTTTGTCACCATGTCCTAATGCTAGTGGCAAAG AAGCTGCGATCGCACTTTCTTACCCAGAAGTGGACAGAGTACAGTCAGCAGAGCATTTTTGGCAATTTTTGCTTTGGGGG AGAACTGTTGACAATTGGGATTGGCGAAGTAAAGGGGTAGTTATTTTCCTGGGAGGTGACCAGTTTTTTCCTGTAGTCAT CGGCAGAAAACTGGGCTATCGCACAGTAGTTTACGCAGAATGGGAAGCCCGTTGGCATAACTTAATTGACCGTTTCGGAG TTATGAAACCCCTAGTTGCAGCCAAAGCATCCCCTAAATACGCCCATAAGTTCACAGTTGTCGGCGACTTGATGTTAGAA GCCAACGCCCAACTCCCCAACGCCCCACACCCCACACCCCACACCCCAATCATAGGTATTTTACCAGGGTCAAAAGCAGC AAAATTAACCCAAGGCATACCATTAATGCTAAGTATTGGTGAGTATATCCACAGCAAAAAGCCCGAAACAAAGTTTGTGA TTCCAGTCGCCCCGACTTTGGATTTAAAAACTTTGGCTAGTTTCGCCGATTCCCAAAAAAACCCATTTGTAGAAACCTTT AGCTTTTCTGGCGCTTCCTTAATTTCCCCAGATAACAATCACCAGCGCTCCATTTTGAAAACAGATAATGGCTTAAATGT GGAGTTATGGCAAGAAAATCCTGCTTATGAATTATTATCCCAATGTAGTATCTGCCTAACCACAGTTGGAGCTAACACGG CTGAGTTAGGGGCTTTAGGCGTACCTATGATAGTTTTACTCCCTACACAACAACTTGATGCGATGCGTTCTTGGGACGGT TTACCAGGATTATTGGCAAATTTACCAGGTGTGGGTTCGACCTTTGCCAAGATGATTAACTGGCTGTTTCTTAGACGCAA AGGTTTATTAGCATGGCCAAATATTTGGGCGCAGGAAGAAATAGTCCCAGAACTTGTAGGTAAACTCCAGCCGCAAGAAG TTGGGGAAATGGTTTTAGATTTGCTAAATCATCCTGAGAAATTGGAACAGATGCGAGGGAAACTCCGCCATGTTCGTGGT GAAAGCGGAGCAGCCCAGAAGTTAGCACAGATAGTTAGTGAAGAAATTGGGAATTAG
Upstream 100 bases:
>100_bases GATAATCACTTATGCGAACAGGAATGGGCTTTTGGTCTGGTTTGGAATTCTAGATATTTAACTACAAAAAATTAGTGCAT CTGCTCCTAACTATTAACTT
Downstream 100 bases:
>100_bases GAGAGACAACTGACAACTGTCAACTTAATCAGATTGTCCGTCACGTCGCCCTAGTTCGTAAATACCACAACCCATACAAG CAAGTATACCCGTACTAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MNPVDILILSNGPGEVTTWVRPVVKALREKLSDDRVQVRISVILSPCPNASGKEAAIALSYPEVDRVQSAEHFWQFLLWG RTVDNWDWRSKGVVIFLGGDQFFPVVIGRKLGYRTVVYAEWEARWHNLIDRFGVMKPLVAAKASPKYAHKFTVVGDLMLE ANAQLPNAPHPTPHTPIIGILPGSKAAKLTQGIPLMLSIGEYIHSKKPETKFVIPVAPTLDLKTLASFADSQKNPFVETF SFSGASLISPDNNHQRSILKTDNGLNVELWQENPAYELLSQCSICLTTVGANTAELGALGVPMIVLLPTQQLDAMRSWDG LPGLLANLPGVGSTFAKMINWLFLRRKGLLAWPNIWAQEEIVPELVGKLQPQEVGEMVLDLLNHPEKLEQMRGKLRHVRG ESGAAQKLAQIVSEEIGN
Sequences:
>Translated_418_residues MNPVDILILSNGPGEVTTWVRPVVKALREKLSDDRVQVRISVILSPCPNASGKEAAIALSYPEVDRVQSAEHFWQFLLWG RTVDNWDWRSKGVVIFLGGDQFFPVVIGRKLGYRTVVYAEWEARWHNLIDRFGVMKPLVAAKASPKYAHKFTVVGDLMLE ANAQLPNAPHPTPHTPIIGILPGSKAAKLTQGIPLMLSIGEYIHSKKPETKFVIPVAPTLDLKTLASFADSQKNPFVETF SFSGASLISPDNNHQRSILKTDNGLNVELWQENPAYELLSQCSICLTTVGANTAELGALGVPMIVLLPTQQLDAMRSWDG LPGLLANLPGVGSTFAKMINWLFLRRKGLLAWPNIWAQEEIVPELVGKLQPQEVGEMVLDLLNHPEKLEQMRGKLRHVRG ESGAAQKLAQIVSEEIGN >Mature_418_residues MNPVDILILSNGPGEVTTWVRPVVKALREKLSDDRVQVRISVILSPCPNASGKEAAIALSYPEVDRVQSAEHFWQFLLWG RTVDNWDWRSKGVVIFLGGDQFFPVVIGRKLGYRTVVYAEWEARWHNLIDRFGVMKPLVAAKASPKYAHKFTVVGDLMLE ANAQLPNAPHPTPHTPIIGILPGSKAAKLTQGIPLMLSIGEYIHSKKPETKFVIPVAPTLDLKTLASFADSQKNPFVETF SFSGASLISPDNNHQRSILKTDNGLNVELWQENPAYELLSQCSICLTTVGANTAELGALGVPMIVLLPTQQLDAMRSWDG LPGLLANLPGVGSTFAKMINWLFLRRKGLLAWPNIWAQEEIVPELVGKLQPQEVGEMVLDLLNHPEKLEQMRGKLRHVRG ESGAAQKLAQIVSEEIGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46188; Mature: 46188
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPVDILILSNGPGEVTTWVRPVVKALREKLSDDRVQVRISVILSPCPNASGKEAAIALS CCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCEEEEEC YPEVDRVQSAEHFWQFLLWGRTVDNWDWRSKGVVIFLGGDQFFPVVIGRKLGYRTVVYAE CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCEEHHHHCCCCCCEEEEEEE WEARWHNLIDRFGVMKPLVAAKASPKYAHKFTVVGDLMLEANAQLPNAPHPTPHTPIIGI HHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEEHHHEECCCCCCCCCCCCCCCCEEEE LPGSKAAKLTQGIPLMLSIGEYIHSKKPETKFVIPVAPTLDLKTLASFADSQKNPFVETF ECCCCHHHHHCCCCCEEHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCEEEE SFSGASLISPDNNHQRSILKTDNGLNVELWQENPAYELLSQCSICLTTVGANTAELGALG ECCCCEEECCCCCCCCCEEECCCCCEEEEECCCCHHHHHHHHHHEEHCCCCCHHHHCCCC VPMIVLLPTQQLDAMRSWDGLPGLLANLPGVGSTFAKMINWLFLRRKGLLAWPNIWAQEE CCEEEEECCHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCHHH IVPELVGKLQPQEVGEMVLDLLNHPEKLEQMRGKLRHVRGESGAAQKLAQIVSEEIGN HHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MNPVDILILSNGPGEVTTWVRPVVKALREKLSDDRVQVRISVILSPCPNASGKEAAIALS CCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCEEEEEC YPEVDRVQSAEHFWQFLLWGRTVDNWDWRSKGVVIFLGGDQFFPVVIGRKLGYRTVVYAE CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCEEHHHHCCCCCCEEEEEEE WEARWHNLIDRFGVMKPLVAAKASPKYAHKFTVVGDLMLEANAQLPNAPHPTPHTPIIGI HHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEEHHHEECCCCCCCCCCCCCCCCEEEE LPGSKAAKLTQGIPLMLSIGEYIHSKKPETKFVIPVAPTLDLKTLASFADSQKNPFVETF ECCCCHHHHHCCCCCEEHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCEEEE SFSGASLISPDNNHQRSILKTDNGLNVELWQENPAYELLSQCSICLTTVGANTAELGALG ECCCCEEECCCCCCCCCEEECCCCCEEEEECCCCHHHHHHHHHHEEHCCCCCHHHHCCCC VPMIVLLPTQQLDAMRSWDGLPGLLANLPGVGSTFAKMINWLFLRRKGLLAWPNIWAQEE CCEEEEECCHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCHHH IVPELVGKLQPQEVGEMVLDLLNHPEKLEQMRGKLRHVRGESGAAQKLAQIVSEEIGN HHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA