| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231482
Identifier: 17231482
GI number: 17231482
Start: 4810007
End: 4810378
Strand: Direct
Name: 17231482
Synonym: alr3990
Alternate gene names: NA
Gene position: 4810007-4810378 (Clockwise)
Preceding gene: 17231480
Following gene: 17231484
Centisome position: 74.99
GC content: 29.03
Gene sequence:
>372_bases ATGAATCAGCCATCAAATTTGCAGGTCAAATATAAAAAAATCTTTCCTATTTTTATGCTAATTTGTAGCATTTTTATACT TTATGTATCATTAGTAGCCGGATTTTCGCTAAATACAATTACAGGTTTAATACTTTTACTGCTCAGTTTTTTAATGTTGA CACGCACTGTAGCTGTGATTACTCCAAATGAGATTCAGATGATGAATCTATTAGGAATTACAGTTAAAACATATTCTTAC ACTCCCGACCAAATTGTAATTGCAAATAATAGCGTTTATGTTAATGGTAAAAAAGTTCTTTCAGGTTTGTGGGCAGACAT CAATATTAAAGAAGTAAAAGAATTTTTCTTACAAATACAAGAAGAACAATAA
Upstream 100 bases:
>100_bases AATTACTCCTGTTCACCCCAAAGAGATAAAACCATAAGACAATTTATAAGACTTGATATCATTTTCATAGGGTCTAGCTA GCATACATTGACTAAGAGAT
Downstream 100 bases:
>100_bases ATTTGGGGTTCCTCAAGAGGCATCGTGTCCTATCACCTCCAGATTTTTTGAATATAAGTAGAAGTAAGATCACTCTCAAT ATACAAGGGTGTGTCAGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MNQPSNLQVKYKKIFPIFMLICSIFILYVSLVAGFSLNTITGLILLLLSFLMLTRTVAVITPNEIQMMNLLGITVKTYSY TPDQIVIANNSVYVNGKKVLSGLWADINIKEVKEFFLQIQEEQ
Sequences:
>Translated_123_residues MNQPSNLQVKYKKIFPIFMLICSIFILYVSLVAGFSLNTITGLILLLLSFLMLTRTVAVITPNEIQMMNLLGITVKTYSY TPDQIVIANNSVYVNGKKVLSGLWADINIKEVKEFFLQIQEEQ >Mature_123_residues MNQPSNLQVKYKKIFPIFMLICSIFILYVSLVAGFSLNTITGLILLLLSFLMLTRTVAVITPNEIQMMNLLGITVKTYSY TPDQIVIANNSVYVNGKKVLSGLWADINIKEVKEFFLQIQEEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13966; Mature: 13966
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQPSNLQVKYKKIFPIFMLICSIFILYVSLVAGFSLNTITGLILLLLSFLMLTRTVAVI CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEE TPNEIQMMNLLGITVKTYSYTPDQIVIANNSVYVNGKKVLSGLWADINIKEVKEFFLQIQ CCCHHHHHHHHEEEEEEEECCCCEEEEECCEEEECHHHHHHHHCCCCCHHHHHHHHHHHH EEQ CCC >Mature Secondary Structure MNQPSNLQVKYKKIFPIFMLICSIFILYVSLVAGFSLNTITGLILLLLSFLMLTRTVAVI CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEE TPNEIQMMNLLGITVKTYSYTPDQIVIANNSVYVNGKKVLSGLWADINIKEVKEFFLQIQ CCCHHHHHHHHEEEEEEEECCCCEEEEECCEEEECHHHHHHHHCCCCCHHHHHHHHHHHH EEQ CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA