| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is cca [H]
Identifier: 17231481
GI number: 17231481
Start: 4806939
End: 4809653
Strand: Reverse
Name: cca [H]
Synonym: all3989
Alternate gene names: 17231481
Gene position: 4809653-4806939 (Counterclockwise)
Preceding gene: 17231483
Following gene: 17231479
Centisome position: 74.99
GC content: 46.3
Gene sequence:
>2715_bases ATGGATTTAATTCTTTGCCACACAACAGCCGATTTTGATACATTGGGCGCAGCCGTAGGACTAACTTGCCTATTACCCGG AAGCAAGATTGTGTTGACTGGGGGCGCGCATCCACCTGTGCGAGATTTTTTGGCGCTACATCGGGATGAGTATCCTTTAA TTGAAAGACGCTCGGTAAATGCGGACAAAATTCGATCGCTCACTATAGTAGATGCCCAACAACGCGATCGCCTGGGTAAG CCGGCTGAGTGGTTAGATTTACCTCAAGTTAAGAAAATTACGGTTTACGACCATCACACAGGACAAACATCAGATATCCC TGCAACTCAGTTTCATGTCGCCTCGGTGGGTGCAACTACAACCCTGATTGCGGAGGAATTACAACGGCAGCAAATCGCTC TCAATCCTGCCCAAGCAACGGTGATGGCTTTGGGTATTCATGTAGATACGGGTTCCCTTACCTACGACCAATCAACTCCC AGGGATGCCTTAGCTTTAGCTTGGTTGATGGCGCAGGGTGCTAGTTTATCTGTAATTACTAATTACCGTGACCCTGGTTT ATCTCCCCAATTGCAGCGACTATTAACGGAAGCGTTGGAAAAATTAGAATATCTTTGCTTACGTGGTTATACTATCGCTT GGGTGACTTTAACAACAGATGGTTATGTCCCTGGGTTATCAAGTCTAGCGTCGCAGCTCATAGAGTTAACAGAAATTGAT GCTTTGCTGTTGGCAAATGAACACCCATCAAATAAAGATGATTCCCGTTTCACAGTAATTGGGCGATCGCAAATTCCCGG TCTGCATCTAGACCAATTATTTCAACCCTTGGGCGGTGGTGGTCATTCCCAAGCAGCATCACTCAATTTACGTGGCGTTG ATAGCCAAGATATCCTTCAACAACTCCTCCAAGGTATCAAGGCGGCTATTCCTCATCCCCCCACAGCTAGGGATTTGATG TCTTCCCCAGTCCGCACAATTCGCCCAGAAACTACAATTGCCGAAGCACAGCGCATTTTATTACGCTACGGACATTCTGG TTTATCTGTGGTTAATCCCCAAGGGCAATTGGTGGGGATTATTTCTCGCCGTGATTTGGATATCGCCCTACATCACGGAT TTAGTCATGCGCCAGTCAAAGGTTACATGACCACTGATTTAAAAACCATCACCCCAGAGACGACGTTGCCACAAATTGAG TCGCTGATGGTGACCTATGATATCGGTCGCTTGCCAGTATTGGCAAATGAGCAGTTAGTGGGTATCGTCACTCGTACCGA TGTTTTACGGGAACTGCATCAAAATATTGCTGTCGGTGGTAGCGGGGCTTTAAGCCAGTTCCGAGATATGGGTGCTGAGT TGAAAACTTCCCTCAGTCATGAATTGCGATCGCGTCTTACTCCCCAACTCTGGCAATTACTCACCACTGCTTCCCAAGCC GCCGAGGAAAGGGGTTGGCATTTGTATTTAGTTGGTGGTGCGGTGCGAGATTTGCTGTTGGCAGAAGCAGCCGCCGGCAC GCTCATGATTACAGATATAGATTTGGTAGTTGATGGCTTCCACAAATCAGCCGATGTGGGTGCAGGTGTGGAACTAGCAA AGGCACTGCAAGAAATTTATCCAGCTGCCCGTTTAGAAATCCACGGTGCTTTTCAAACGGCTGCTTTGTTGTGGCACAAA GACCCAGACTTAGATTCTTTGTGGGTAGATATTGCCACCGCCAGGACGGAATTTTATCCTTACCCCGCCGCGAATCCTGA AGTTGAAGCCAGTTCCATTCGCCAAGACTTATATCGCCGTGACTTCACCATCAACGCCCTCGCCCTGCGCCTTACCTCTC CCCGTGCTGGCGATTTACTCGATTTCTTTGGCGGTTTATTAGATTTAAAAGCCAAGCAAATCCGCGTCCTGCACGCCAAT AGCTTTATCGAAGATCCCACCCGGATTTATCGCGGTGTGCGCTTTGCTGTGCGTTTTGGATTTGCCATTGAACCACGCAC CGAAGAATATATCCGCTATGCCATCAACAGTGGTGTTTACGATCGCACTGCCCAAAACAATACCAAAACCCCAGCCCTGC AAACTCGACTCAAAACTGAACTCAAGCACATATTAGAAGCACCTTACTGGCGATCTGCTTTGCAATTACTCGATGACTTA GGGGCATTACAGTGCATCCATCCTACCCTGAGTTTAGATAGTGAACTCACAAAACAACTACTTTTACTAGAACGTTGTTT GCGGCGATTTGACCCCCAACAAAACCTAATTCCTTGGCAAATGCGCTTAGAAGCCATTATTGCCCACCTCGCACCAAAGT ATCGAGGTAAAGTTGCCAAAAATCTGCAATTACAAGAAGATAGCATTCAGCACTTGCAAAACCTCGCTGTTGCTCAGACT GAGATTATACAATCTTTATCTGAATATCAACGCCCCAGCCAAGTAGTTCAACTACTACGCAAGTACAATTTAGAAATACT AATTTTGATTGCTTTACAAAGCCAGCGCCCCATCAGGCGGCAAATCTGGCAATACTTAACAGTCTGGGCTAACGTTCAAC CAATTTTAAATGGTAATGACCTCAAGAAGTTAGGATATAAACCAGGGCCGCAGTATCGACAAATGCTAGATGATTTACTA GCTAAAACTTTAGATGGAAACATTACAAATCAAGTCGAAGCCCAAGAGTTTTTAGCCCAGCAGTATTATAAATAA
Upstream 100 bases:
>100_bases CATTAACTAAAGCATCTGCTCATAGTGCTGTGTGAGAGTATGTCAGATATTCTTCCAGAAAACCCCATAGCAGAGAATGT GGAGCCGCCAAAAGTTAAAC
Downstream 100 bases:
>100_bases CAATTAAGTTAACAACCGAATCCTTGACCCCTGTTGCGTTTTATCTACCTCAATTCTGGCTTGAAAGGCTTCCTTAAGGT GGGGCATATGGGTAACAGTG
Product: polyA polymerase
Products: NA
Alternate protein names: tRNA CCA-pyrophosphorylase; tRNA adenylyl-/cytidylyl- transferase; tRNA nucleotidyltransferase; tRNA-NT [H]
Number of amino acids: Translated: 904; Mature: 904
Protein sequence:
>904_residues MDLILCHTTADFDTLGAAVGLTCLLPGSKIVLTGGAHPPVRDFLALHRDEYPLIERRSVNADKIRSLTIVDAQQRDRLGK PAEWLDLPQVKKITVYDHHTGQTSDIPATQFHVASVGATTTLIAEELQRQQIALNPAQATVMALGIHVDTGSLTYDQSTP RDALALAWLMAQGASLSVITNYRDPGLSPQLQRLLTEALEKLEYLCLRGYTIAWVTLTTDGYVPGLSSLASQLIELTEID ALLLANEHPSNKDDSRFTVIGRSQIPGLHLDQLFQPLGGGGHSQAASLNLRGVDSQDILQQLLQGIKAAIPHPPTARDLM SSPVRTIRPETTIAEAQRILLRYGHSGLSVVNPQGQLVGIISRRDLDIALHHGFSHAPVKGYMTTDLKTITPETTLPQIE SLMVTYDIGRLPVLANEQLVGIVTRTDVLRELHQNIAVGGSGALSQFRDMGAELKTSLSHELRSRLTPQLWQLLTTASQA AEERGWHLYLVGGAVRDLLLAEAAAGTLMITDIDLVVDGFHKSADVGAGVELAKALQEIYPAARLEIHGAFQTAALLWHK DPDLDSLWVDIATARTEFYPYPAANPEVEASSIRQDLYRRDFTINALALRLTSPRAGDLLDFFGGLLDLKAKQIRVLHAN SFIEDPTRIYRGVRFAVRFGFAIEPRTEEYIRYAINSGVYDRTAQNNTKTPALQTRLKTELKHILEAPYWRSALQLLDDL GALQCIHPTLSLDSELTKQLLLLERCLRRFDPQQNLIPWQMRLEAIIAHLAPKYRGKVAKNLQLQEDSIQHLQNLAVAQT EIIQSLSEYQRPSQVVQLLRKYNLEILILIALQSQRPIRRQIWQYLTVWANVQPILNGNDLKKLGYKPGPQYRQMLDDLL AKTLDGNITNQVEAQEFLAQQYYK
Sequences:
>Translated_904_residues MDLILCHTTADFDTLGAAVGLTCLLPGSKIVLTGGAHPPVRDFLALHRDEYPLIERRSVNADKIRSLTIVDAQQRDRLGK PAEWLDLPQVKKITVYDHHTGQTSDIPATQFHVASVGATTTLIAEELQRQQIALNPAQATVMALGIHVDTGSLTYDQSTP RDALALAWLMAQGASLSVITNYRDPGLSPQLQRLLTEALEKLEYLCLRGYTIAWVTLTTDGYVPGLSSLASQLIELTEID ALLLANEHPSNKDDSRFTVIGRSQIPGLHLDQLFQPLGGGGHSQAASLNLRGVDSQDILQQLLQGIKAAIPHPPTARDLM SSPVRTIRPETTIAEAQRILLRYGHSGLSVVNPQGQLVGIISRRDLDIALHHGFSHAPVKGYMTTDLKTITPETTLPQIE SLMVTYDIGRLPVLANEQLVGIVTRTDVLRELHQNIAVGGSGALSQFRDMGAELKTSLSHELRSRLTPQLWQLLTTASQA AEERGWHLYLVGGAVRDLLLAEAAAGTLMITDIDLVVDGFHKSADVGAGVELAKALQEIYPAARLEIHGAFQTAALLWHK DPDLDSLWVDIATARTEFYPYPAANPEVEASSIRQDLYRRDFTINALALRLTSPRAGDLLDFFGGLLDLKAKQIRVLHAN SFIEDPTRIYRGVRFAVRFGFAIEPRTEEYIRYAINSGVYDRTAQNNTKTPALQTRLKTELKHILEAPYWRSALQLLDDL GALQCIHPTLSLDSELTKQLLLLERCLRRFDPQQNLIPWQMRLEAIIAHLAPKYRGKVAKNLQLQEDSIQHLQNLAVAQT EIIQSLSEYQRPSQVVQLLRKYNLEILILIALQSQRPIRRQIWQYLTVWANVQPILNGNDLKKLGYKPGPQYRQMLDDLL AKTLDGNITNQVEAQEFLAQQYYK >Mature_904_residues MDLILCHTTADFDTLGAAVGLTCLLPGSKIVLTGGAHPPVRDFLALHRDEYPLIERRSVNADKIRSLTIVDAQQRDRLGK PAEWLDLPQVKKITVYDHHTGQTSDIPATQFHVASVGATTTLIAEELQRQQIALNPAQATVMALGIHVDTGSLTYDQSTP RDALALAWLMAQGASLSVITNYRDPGLSPQLQRLLTEALEKLEYLCLRGYTIAWVTLTTDGYVPGLSSLASQLIELTEID ALLLANEHPSNKDDSRFTVIGRSQIPGLHLDQLFQPLGGGGHSQAASLNLRGVDSQDILQQLLQGIKAAIPHPPTARDLM SSPVRTIRPETTIAEAQRILLRYGHSGLSVVNPQGQLVGIISRRDLDIALHHGFSHAPVKGYMTTDLKTITPETTLPQIE SLMVTYDIGRLPVLANEQLVGIVTRTDVLRELHQNIAVGGSGALSQFRDMGAELKTSLSHELRSRLTPQLWQLLTTASQA AEERGWHLYLVGGAVRDLLLAEAAAGTLMITDIDLVVDGFHKSADVGAGVELAKALQEIYPAARLEIHGAFQTAALLWHK DPDLDSLWVDIATARTEFYPYPAANPEVEASSIRQDLYRRDFTINALALRLTSPRAGDLLDFFGGLLDLKAKQIRVLHAN SFIEDPTRIYRGVRFAVRFGFAIEPRTEEYIRYAINSGVYDRTAQNNTKTPALQTRLKTELKHILEAPYWRSALQLLDDL GALQCIHPTLSLDSELTKQLLLLERCLRRFDPQQNLIPWQMRLEAIIAHLAPKYRGKVAKNLQLQEDSIQHLQNLAVAQT EIIQSLSEYQRPSQVVQLLRKYNLEILILIALQSQRPIRRQIWQYLTVWANVQPILNGNDLKKLGYKPGPQYRQMLDDLL AKTLDGNITNQVEAQEFLAQQYYK
Specific function: Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing
COG id: COG0617
COG function: function code J; tRNA nucleotidyltransferase/poly(A) polymerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. Bacterial CCA-adding enzyme type 3 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789436, Length=255, Percent_Identity=30.5882352941176, Blast_Score=66, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023068 - InterPro: IPR002646 [H]
Pfam domain/function: PF01743 PolyA_pol [H]
EC number: =2.7.7.21; =2.7.7.25 [H]
Molecular weight: Translated: 100619; Mature: 100619
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLILCHTTADFDTLGAAVGLTCLLPGSKIVLTGGAHPPVRDFLALHRDEYPLIERRSVN CCEEEEECCCCHHHHHHHHHHEEECCCCEEEEECCCCCCHHHHHHHCCCCCCCHHCCCCC ADKIRSLTIVDAQQRDRLGKPAEWLDLPQVKKITVYDHHTGQTSDIPATQFHVASVGATT HHHHCEEEEECCHHHHCCCCCHHHCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCHHH TLIAEELQRQQIALNPAQATVMALGIHVDTGSLTYDQSTPRDALALAWLMAQGASLSVIT HHHHHHHHHHHHCCCHHHEEEEEEEEEEECCCEEECCCCCHHHHHHHHHHHCCCCEEEEE NYRDPGLSPQLQRLLTEALEKLEYLCLRGYTIAWVTLTTDGYVPGLSSLASQLIELTEID CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHH ALLLANEHPSNKDDSRFTVIGRSQIPGLHLDQLFQPLGGGGHSQAASLNLRGVDSQDILQ HHEEECCCCCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCEEEECCCCHHHHHH QLLQGIKAAIPHPPTARDLMSSPVRTIRPETTIAEAQRILLRYGHSGLSVVNPQGQLVGI HHHHHHHHHCCCCCCHHHHHHCCHHHCCCCHHHHHHHHHHHHHCCCCCEEECCCCCEEEE ISRRDLDIALHHGFSHAPVKGYMTTDLKTITPETTLPQIESLMVTYDIGRLPVLANEQLV EECCCCEEEEECCCCCCCCCCEEECCCEECCCCCCHHHHHHEEEEEECCCCCEECCCCEE GIVTRTDVLRELHQNIAVGGSGALSQFRDMGAELKTSLSHELRSRLTPQLWQLLTTASQA EEHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH AEERGWHLYLVGGAVRDLLLAEAAAGTLMITDIDLVVDGFHKSADVGAGVELAKALQEIY HHHCCCEEEEECHHHHHHHHHHHCCCEEEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHC PAARLEIHGAFQTAALLWHKDPDLDSLWVDIATARTEFYPYPAANPEVEASSIRQDLYRR CHHEEEEECHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHC DFTINALALRLTSPRAGDLLDFFGGLLDLKAKQIRVLHANSFIEDPTRIYRGVRFAVRFG CCEEEEEEEEECCCCCCCHHHHHHHHHHCCHHHEEEEECCCCCCCHHHHHHHHHEEHHCC FAIEPRTEEYIRYAINSGVYDRTAQNNTKTPALQTRLKTELKHILEAPYWRSALQLLDDL EEECCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC GALQCIHPTLSLDSELTKQLLLLERCLRRFDPQQNLIPWQMRLEAIIAHLAPKYRGKVAK CHHEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHCHHHH NLQLQEDSIQHLQNLAVAQTEIIQSLSEYQRPSQVVQLLRKYNLEILILIALQSQRPIRR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEECCCCCHHH QIWQYLTVWANVQPILNGNDLKKLGYKPGPQYRQMLDDLLAKTLDGNITNQVEAQEFLAQ HHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH QYYK HHCC >Mature Secondary Structure MDLILCHTTADFDTLGAAVGLTCLLPGSKIVLTGGAHPPVRDFLALHRDEYPLIERRSVN CCEEEEECCCCHHHHHHHHHHEEECCCCEEEEECCCCCCHHHHHHHCCCCCCCHHCCCCC ADKIRSLTIVDAQQRDRLGKPAEWLDLPQVKKITVYDHHTGQTSDIPATQFHVASVGATT HHHHCEEEEECCHHHHCCCCCHHHCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCHHH TLIAEELQRQQIALNPAQATVMALGIHVDTGSLTYDQSTPRDALALAWLMAQGASLSVIT HHHHHHHHHHHHCCCHHHEEEEEEEEEEECCCEEECCCCCHHHHHHHHHHHCCCCEEEEE NYRDPGLSPQLQRLLTEALEKLEYLCLRGYTIAWVTLTTDGYVPGLSSLASQLIELTEID CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHH ALLLANEHPSNKDDSRFTVIGRSQIPGLHLDQLFQPLGGGGHSQAASLNLRGVDSQDILQ HHEEECCCCCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCEEEECCCCHHHHHH QLLQGIKAAIPHPPTARDLMSSPVRTIRPETTIAEAQRILLRYGHSGLSVVNPQGQLVGI HHHHHHHHHCCCCCCHHHHHHCCHHHCCCCHHHHHHHHHHHHHCCCCCEEECCCCCEEEE ISRRDLDIALHHGFSHAPVKGYMTTDLKTITPETTLPQIESLMVTYDIGRLPVLANEQLV EECCCCEEEEECCCCCCCCCCEEECCCEECCCCCCHHHHHHEEEEEECCCCCEECCCCEE GIVTRTDVLRELHQNIAVGGSGALSQFRDMGAELKTSLSHELRSRLTPQLWQLLTTASQA EEHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH AEERGWHLYLVGGAVRDLLLAEAAAGTLMITDIDLVVDGFHKSADVGAGVELAKALQEIY HHHCCCEEEEECHHHHHHHHHHHCCCEEEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHC PAARLEIHGAFQTAALLWHKDPDLDSLWVDIATARTEFYPYPAANPEVEASSIRQDLYRR CHHEEEEECHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHC DFTINALALRLTSPRAGDLLDFFGGLLDLKAKQIRVLHANSFIEDPTRIYRGVRFAVRFG CCEEEEEEEEECCCCCCCHHHHHHHHHHCCHHHEEEEECCCCCCCHHHHHHHHHEEHHCC FAIEPRTEEYIRYAINSGVYDRTAQNNTKTPALQTRLKTELKHILEAPYWRSALQLLDDL EEECCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC GALQCIHPTLSLDSELTKQLLLLERCLRRFDPQQNLIPWQMRLEAIIAHLAPKYRGKVAK CHHEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHCHHHH NLQLQEDSIQHLQNLAVAQTEIIQSLSEYQRPSQVVQLLRKYNLEILILIALQSQRPIRR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEECCCCCHHH QIWQYLTVWANVQPILNGNDLKKLGYKPGPQYRQMLDDLLAKTLDGNITNQVEAQEFLAQ HHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH QYYK HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11442348 [H]