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The map label for this gene is pex

Identifier: 17231471

GI number: 17231471

Start: 4793740

End: 4794087

Strand: Direct

Name: pex

Synonym: alr3979

Alternate gene names: NA

Gene position: 4793740-4794087 (Clockwise)

Preceding gene: 17231460

Following gene: 17231472

Centisome position: 74.74

GC content: 40.52

Gene sequence:

>348_bases
ATGAAAATTGAGGATATATATCAATTCTTTGAAAATCCTCCGCCAACTTACCTCTGCCAGGAAGTAGCAATTTGTTACAT
TCTGTATGTTTTACTACAAGGTGAATCCTACGGAACTGAATTAATTCAGCAACTAGAAACTGAACACCCTACCTATCGGC
TCTCAGATACTGTACTTTATAGTGCCATCAAATTTCTGGAAGACAATAGGGCAATTACTGGGTATTGGAAGAAGTTGGAA
GGGCGAGGTCGCCCCAGGCGAATGTACCAAGTTTCTCCAGAATGGCAACATCAAGCGGAAGATTTAGCCCGGCTTTGGCA
AAATTACATTTATGTGAGGACAAATTAA

Upstream 100 bases:

>100_bases
AGGTAGCGCTATATACTTACACATTTGCAAGTAGCGCCCTATACTGATGAAAAACCTTTAGCTTTCACCTTAAGGGATAC
TTTTAGCCATCCACGAACTT

Downstream 100 bases:

>100_bases
CCAATAATTAATAATGAATAAATCTCCTCCTGTGAAAAATTAATAATTAGTTATGGATACTGCTATTCTGCCATCAACGT
TCTTACTCACCTTGTTACTG

Product: Pex protein

Products: NA

Alternate protein names: Circadian Period Extender Pex; Period-Extender Protein; PadR Family Transcriptional Regulator; Circadian Period Extender Gene; Period-Extender; Transcriptional Regulator PadR Family; PadR-Like Family Transcriptional Regulator; Transcriptional Regulator PadR-Like Family; Transcriptional Regulator PadR Family Protein; Circadian Period Extender

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MKIEDIYQFFENPPPTYLCQEVAICYILYVLLQGESYGTELIQQLETEHPTYRLSDTVLYSAIKFLEDNRAITGYWKKLE
GRGRPRRMYQVSPEWQHQAEDLARLWQNYIYVRTN

Sequences:

>Translated_115_residues
MKIEDIYQFFENPPPTYLCQEVAICYILYVLLQGESYGTELIQQLETEHPTYRLSDTVLYSAIKFLEDNRAITGYWKKLE
GRGRPRRMYQVSPEWQHQAEDLARLWQNYIYVRTN
>Mature_115_residues
MKIEDIYQFFENPPPTYLCQEVAICYILYVLLQGESYGTELIQQLETEHPTYRLSDTVLYSAIKFLEDNRAITGYWKKLE
GRGRPRRMYQVSPEWQHQAEDLARLWQNYIYVRTN

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13847; Mature: 13847

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIEDIYQFFENPPPTYLCQEVAICYILYVLLQGESYGTELIQQLETEHPTYRLSDTVLY
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEHHHHHHH
SAIKFLEDNRAITGYWKKLEGRGRPRRMYQVSPEWQHQAEDLARLWQNYIYVRTN
HHHHHHHCCCCHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHEEEEECC
>Mature Secondary Structure
MKIEDIYQFFENPPPTYLCQEVAICYILYVLLQGESYGTELIQQLETEHPTYRLSDTVLY
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEHHHHHHH
SAIKFLEDNRAITGYWKKLEGRGRPRRMYQVSPEWQHQAEDLARLWQNYIYVRTN
HHHHHHHCCCCHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA