| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231464
Identifier: 17231464
GI number: 17231464
Start: 4788629
End: 4789030
Strand: Reverse
Name: 17231464
Synonym: all3972
Alternate gene names: NA
Gene position: 4789030-4788629 (Counterclockwise)
Preceding gene: 17231465
Following gene: 17231463
Centisome position: 74.67
GC content: 40.55
Gene sequence:
>402_bases ATGTCTGAAGTAATAGTCCTCGATACTCATATTTGGTTCTGGTTGATTAATCAAGAATTTCAAAGATTTCCTACTCAGTG GAGAGAAGCTATCGAAACGGCTGAACAAGTAGGCATTTCGGTTATTTCTTGTTATGAAATTGCACTGGCACAGCAGCGAG GAAGGCTACAGTTACCCTGTGCCGCTAATCAATGGTTTCAGGAAGCTTTGCAGCCAGCAGATATTACATTATTTCCCTTA ACTCCCGAAATTGTCTGCCGTGCTGTAGATTTATCTCCTATTCACAAAGATCCGTTTGACCGCCTGATTGTTGCTACTAC ATTGGAATATCAAGCAAAGTTAGCCAGTGTTGATAGTTTGTTCTCTCAGTATCCTGAACTTGATACTCATTTGATGAAGT AG
Upstream 100 bases:
>100_bases TACCATCAAAGAAACGCCGCACTGCCCCTGAATCTATTGCAGGCAAAGGTAAAACATTAGGGGATATTGTCAGTCCTATA GTTGATGAAGAAGACTGGGA
Downstream 100 bases:
>100_bases TGGGCGCTCAGTCTAACTTAGGCATAGTTTCCTACTGTAGTATGCTTTGAGTCTCAGCATCGGTTTTCTAAACTACTACA ATAAAAATATATATCGGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: PilT Domain-Containing Protein; PIN Domain Family Protein; PilT Protein N-Terminal
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MSEVIVLDTHIWFWLINQEFQRFPTQWREAIETAEQVGISVISCYEIALAQQRGRLQLPCAANQWFQEALQPADITLFPL TPEIVCRAVDLSPIHKDPFDRLIVATTLEYQAKLASVDSLFSQYPELDTHLMK
Sequences:
>Translated_133_residues MSEVIVLDTHIWFWLINQEFQRFPTQWREAIETAEQVGISVISCYEIALAQQRGRLQLPCAANQWFQEALQPADITLFPL TPEIVCRAVDLSPIHKDPFDRLIVATTLEYQAKLASVDSLFSQYPELDTHLMK >Mature_132_residues SEVIVLDTHIWFWLINQEFQRFPTQWREAIETAEQVGISVISCYEIALAQQRGRLQLPCAANQWFQEALQPADITLFPLT PEIVCRAVDLSPIHKDPFDRLIVATTLEYQAKLASVDSLFSQYPELDTHLMK
Specific function: Unknown
COG id: COG3744
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15348; Mature: 15217
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVIVLDTHIWFWLINQEFQRFPTQWREAIETAEQVGISVISCYEIALAQQRGRLQLPC CCCEEEEECCEEEEEECHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCEECCC AANQWFQEALQPADITLFPLTPEIVCRAVDLSPIHKDPFDRLIVATTLEYQAKLASVDSL CCHHHHHHHCCCCCEEEEECCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FSQYPELDTHLMK HHHCCCHHHHHCC >Mature Secondary Structure SEVIVLDTHIWFWLINQEFQRFPTQWREAIETAEQVGISVISCYEIALAQQRGRLQLPC CCEEEEECCEEEEEECHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCEECCC AANQWFQEALQPADITLFPLTPEIVCRAVDLSPIHKDPFDRLIVATTLEYQAKLASVDSL CCHHHHHHHCCCCCEEEEECCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FSQYPELDTHLMK HHHCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA