| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is 17231454
Identifier: 17231454
GI number: 17231454
Start: 4781207
End: 4781827
Strand: Reverse
Name: 17231454
Synonym: all3962
Alternate gene names: NA
Gene position: 4781827-4781207 (Counterclockwise)
Preceding gene: 17231455
Following gene: 17231445
Centisome position: 74.56
GC content: 33.66
Gene sequence:
>621_bases ATGGAGAGTTTAAATAAAGAAGAATACGAAGCTAAAGATAGAGCATTCTACAGTGCCATGATTAGTGCTTGGCTGAATAC TAAAATTGAGCGTGATAAACAATTATTAGGGTTATCAAGTACTGCTATAGGCTTACTTGTTACTTTACTAAGGACGACTG GAGTTTCCAACTACATACAAATCTCTCTTTTTTCTTTTGCTCTCTTCTTTTTCTTGATTACAGTAATAGCAGTTGTTTGT ATTCTGGATCGAAATGCCAAATATATTCAAGAGATGCTTAAGCAAAACAAAGCTCAAGATAAGATTTTAATAATTCTAGA CTACGTTGCTATAATAAGTTTTATCTTAGGTATAATTTTAGTCGTCATTATTGGCGTTTCCTCGGCAGATATGGAGTCGA AAGAGAAAAATTTAACTATGAGCAACACAAAAAGAATTAACATTGATTACCAAGTTAACAAGGAAGATAAAAAAAGCTGG ACTGGCATTTCTGAATTACGTCCTCAACCACCAAAAGCACCGCAGGAATCTCCTAAAACTCCTAATAATCCGAATCCTCC AACTTACTCTGGAAGCAATGAATCTGGAAATTCAAATAACACAACTAACAACTGTTATTAA
Upstream 100 bases:
>100_bases GACTAACGATGCTTTGTGCTTCGAGTGAGTATATTCAGAAAATTGTGAACCATTGGAATAAACTTACTTAATTACTCTGT CATACACAATTTTTCAAGAT
Downstream 100 bases:
>100_bases TAGTAAGTTTTCATCAATGATAATTTGGTACATACCATCACAACTTTTAAACCTGATGTTAGTTCCGTATTAGATACGCT ATCTAACATCATAATGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MESLNKEEYEAKDRAFYSAMISAWLNTKIERDKQLLGLSSTAIGLLVTLLRTTGVSNYIQISLFSFALFFFLITVIAVVC ILDRNAKYIQEMLKQNKAQDKILIILDYVAIISFILGIILVVIIGVSSADMESKEKNLTMSNTKRINIDYQVNKEDKKSW TGISELRPQPPKAPQESPKTPNNPNPPTYSGSNESGNSNNTTNNCY
Sequences:
>Translated_206_residues MESLNKEEYEAKDRAFYSAMISAWLNTKIERDKQLLGLSSTAIGLLVTLLRTTGVSNYIQISLFSFALFFFLITVIAVVC ILDRNAKYIQEMLKQNKAQDKILIILDYVAIISFILGIILVVIIGVSSADMESKEKNLTMSNTKRINIDYQVNKEDKKSW TGISELRPQPPKAPQESPKTPNNPNPPTYSGSNESGNSNNTTNNCY >Mature_206_residues MESLNKEEYEAKDRAFYSAMISAWLNTKIERDKQLLGLSSTAIGLLVTLLRTTGVSNYIQISLFSFALFFFLITVIAVVC ILDRNAKYIQEMLKQNKAQDKILIILDYVAIISFILGIILVVIIGVSSADMESKEKNLTMSNTKRINIDYQVNKEDKKSW TGISELRPQPPKAPQESPKTPNNPNPPTYSGSNESGNSNNTTNNCY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23109; Mature: 23109
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESLNKEEYEAKDRAFYSAMISAWLNTKIERDKQLLGLSSTAIGLLVTLLRTTGVSNYIQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHH ISLFSFALFFFLITVIAVVCILDRNAKYIQEMLKQNKAQDKILIILDYVAIISFILGIIL HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH VVIIGVSSADMESKEKNLTMSNTKRINIDYQVNKEDKKSWTGISELRPQPPKAPQESPKT HHHHCCCCCCHHHHHCCCEECCCEEEEEEEEECCHHHHHHCCHHHCCCCCCCCCCCCCCC PNNPNPPTYSGSNESGNSNNTTNNCY CCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MESLNKEEYEAKDRAFYSAMISAWLNTKIERDKQLLGLSSTAIGLLVTLLRTTGVSNYIQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHH ISLFSFALFFFLITVIAVVCILDRNAKYIQEMLKQNKAQDKILIILDYVAIISFILGIIL HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH VVIIGVSSADMESKEKNLTMSNTKRINIDYQVNKEDKKSWTGISELRPQPPKAPQESPKT HHHHCCCCCCHHHHHCCCEECCCEEEEEEEEECCHHHHHHCCHHHCCCCCCCCCCCCCCC PNNPNPPTYSGSNESGNSNNTTNNCY CCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA