| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is trxA [H]
Identifier: 17231447
GI number: 17231447
Start: 4773752
End: 4774138
Strand: Direct
Name: trxA [H]
Synonym: alr3955
Alternate gene names: 17231447
Gene position: 4773752-4774138 (Clockwise)
Preceding gene: 17231446
Following gene: 17231448
Centisome position: 74.43
GC content: 41.34
Gene sequence:
>387_bases ATGGTGTTGTCGGTTAGTGAGCGGACATTTACTCAAGAAGTTTTAGAATCTCCGGTTCCGGTTTTAGTAAATTTTGAAGC ACCCTGGTGTGGATTGTGTCGCATTATCCACCCTTTGTTATTACAATTTCAATCTCAATGCGGCGAACAAATTAAACTAG TTGGGGTGAACGCTGACGAGAATTTCAAACTTTCTAACACTTATCGTTTAAAGTCTTTGCCCACGTTACTTTTGATTGAA AATGGAATCGTTCGCCATCGTCTAGAAGGGTTTCGCGGCAGAGATGACCTACGGTTAGCTTTAGAAGAAATCAAACTCAA TTATACCAACCGTCCTAAAGCATACACTAGCTCTAAAACGGCAGACTTAGAATGTCGGACAGCGTGA
Upstream 100 bases:
>100_bases GCGGTACTGAAATATAGCTGCTATAAAACATTAACTAGCTTGCTAACTTCTTCTGCTGATAGCTAGTTTGATAGTAAAAC CCTATAATTCTAGAGGCGTC
Downstream 100 bases:
>100_bases TTGGGAATTGGGTATTAAGTTTCGGGTGTTGGGTCAAATCCTTCCCAATTCCCAGTCTCCAGTCCCCAAATCTAAAACCA TGCTTAATACCCCACTCAAT
Product: thioredoxin
Products: NA
Alternate protein names: Trx-1; Thioredoxin-M [H]
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MVLSVSERTFTQEVLESPVPVLVNFEAPWCGLCRIIHPLLLQFQSQCGEQIKLVGVNADENFKLSNTYRLKSLPTLLLIE NGIVRHRLEGFRGRDDLRLALEEIKLNYTNRPKAYTSSKTADLECRTA
Sequences:
>Translated_128_residues MVLSVSERTFTQEVLESPVPVLVNFEAPWCGLCRIIHPLLLQFQSQCGEQIKLVGVNADENFKLSNTYRLKSLPTLLLIE NGIVRHRLEGFRGRDDLRLALEEIKLNYTNRPKAYTSSKTADLECRTA >Mature_128_residues MVLSVSERTFTQEVLESPVPVLVNFEAPWCGLCRIIHPLLLQFQSQCGEQIKLVGVNADENFKLSNTYRLKSLPTLLLIE NGIVRHRLEGFRGRDDLRLALEEIKLNYTNRPKAYTSSKTADLECRTA
Specific function: Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI87082331, Length=97, Percent_Identity=28.8659793814433, Blast_Score=63, Evalue=6e-12, Organism=Escherichia coli, GI1788936, Length=79, Percent_Identity=31.6455696202532, Blast_Score=61, Evalue=3e-11, Organism=Drosophila melanogaster, GI28573567, Length=98, Percent_Identity=33.6734693877551, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI24639068, Length=82, Percent_Identity=35.3658536585366, Blast_Score=63, Evalue=5e-11,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: NA
Molecular weight: Translated: 14590; Mature: 14590
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLSVSERTFTQEVLESPVPVLVNFEAPWCGLCRIIHPLLLQFQSQCGEQIKLVGVNADE CEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC NFKLSNTYRLKSLPTLLLIENGIVRHRLEGFRGRDDLRLALEEIKLNYTNRPKAYTSSKT CEEECCEEECCCCCEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC ADLECRTA CCEEEECC >Mature Secondary Structure MVLSVSERTFTQEVLESPVPVLVNFEAPWCGLCRIIHPLLLQFQSQCGEQIKLVGVNADE CEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC NFKLSNTYRLKSLPTLLLIENGIVRHRLEGFRGRDDLRLALEEIKLNYTNRPKAYTSSKT CEEECCEEECCCCCEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC ADLECRTA CCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2492995 [H]