Click here to switch to the map view.

The map label for this gene is cbiM

Identifier: 17231439

GI number: 17231439

Start: 4764864

End: 4765784

Strand: Direct

Name: cbiM

Synonym: alr3947

Alternate gene names: NA

Gene position: 4764864-4765784 (Clockwise)

Preceding gene: 17231438

Following gene: 17231440

Centisome position: 74.29

GC content: 48.43

Gene sequence:

>921_bases
ATGCATATTCCTGATGGATTTGTGTCTGTGCCGGTGGCAGGCGCAACGAGTTTGGTAAGTTTGGCAGGACTATTGGTTGC
TAGTGGGCGATCGCAAACAGCTTTTGGTATTCGTCGCGCCCCCATCCTGGGCTTAACCACCGCCTTTATTTTTGCGGCGC
AAATGATTAATTTCCCGGTAGCAGGGGGAACCAGTGGTCACTTGCTCGGAGGTACTTTAGCTGCGATCGTTTTAGGTAGC
CCCTGGGCTGGCTCTTTGTGCATCGCCACAGTCTTAATTATCCAGGCGGTGCTGTTCGCTGACGGTGGGATCACTGCCTT
GGGAGCAAATATATTAAACATGGGATTCATTGGCGTTTGGGTAGGCTGGATGTTAACCCAAACCTTGCAAAGGCTATTTG
GCGGCTCTAAAGCACGTTTACCCTTAGCGGCTGGTATAGCGGCGGCCGTGAGTGTCGTAGTAGCAGCGATCGCCTGTGCT
ATTGAGTTAGTCATTTCTGGGACTGCATCCATAGCTGTGTTACCTGCTATGACTGGTGTTCATATTTTGATTGGTATTGG
TGAAGGCCTAATTACTGGCGGTGTATTAACTTATCTAGCCAAAGCCAGGCCAGATTTGTTACCAGGAGAACAAGAAGAAT
TTCGCGGTTGGTTAGTGCCTGTTGTTAGCATAGTCTTAGTAGCTGGTGCATTGTCATTGCTAGCCTCAGCTTGGCCTGAT
GGCTTAGAAAGAGTGGCAGAAGACTTGGGATTTATCAAACTAAGTGAAGAAGTCAGAATATCTGTACCGACACCGTTAGC
AGACTATGGTATTGAGGGTTTAGGAGCAATTGGGACGAGTATTGCTGGACTTCTGGGGGCTGCGGTTTGCTTTGCTGTTG
CTTTTGGAATTGCCAAAGTAGTGAGACCAAAGAATGCTTAA

Upstream 100 bases:

>100_bases
GGCATTGAAAACAAAAGAAAAATAGTGTTTTTTATTAGTTTGATGCCTGAATGACATTATTTTTATTGTGTGAAATAACA
CGTTAGTTACGGGGCGAATC

Downstream 100 bases:

>100_bases
AATGGCTTTGCCGTTACGTTTACATCTATCCCTGGTGATTGTTGTAGGGACAGCCTTACTCAAGCATCATACTTGGTATT
GGTTGGGCGCGTATGCTGCG

Product: cobalt transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MHIPDGFVSVPVAGATSLVSLAGLLVASGRSQTAFGIRRAPILGLTTAFIFAAQMINFPVAGGTSGHLLGGTLAAIVLGS
PWAGSLCIATVLIIQAVLFADGGITALGANILNMGFIGVWVGWMLTQTLQRLFGGSKARLPLAAGIAAAVSVVVAAIACA
IELVISGTASIAVLPAMTGVHILIGIGEGLITGGVLTYLAKARPDLLPGEQEEFRGWLVPVVSIVLVAGALSLLASAWPD
GLERVAEDLGFIKLSEEVRISVPTPLADYGIEGLGAIGTSIAGLLGAAVCFAVAFGIAKVVRPKNA

Sequences:

>Translated_306_residues
MHIPDGFVSVPVAGATSLVSLAGLLVASGRSQTAFGIRRAPILGLTTAFIFAAQMINFPVAGGTSGHLLGGTLAAIVLGS
PWAGSLCIATVLIIQAVLFADGGITALGANILNMGFIGVWVGWMLTQTLQRLFGGSKARLPLAAGIAAAVSVVVAAIACA
IELVISGTASIAVLPAMTGVHILIGIGEGLITGGVLTYLAKARPDLLPGEQEEFRGWLVPVVSIVLVAGALSLLASAWPD
GLERVAEDLGFIKLSEEVRISVPTPLADYGIEGLGAIGTSIAGLLGAAVCFAVAFGIAKVVRPKNA
>Mature_306_residues
MHIPDGFVSVPVAGATSLVSLAGLLVASGRSQTAFGIRRAPILGLTTAFIFAAQMINFPVAGGTSGHLLGGTLAAIVLGS
PWAGSLCIATVLIIQAVLFADGGITALGANILNMGFIGVWVGWMLTQTLQRLFGGSKARLPLAAGIAAAVSVVVAAIACA
IELVISGTASIAVLPAMTGVHILIGIGEGLITGGVLTYLAKARPDLLPGEQEEFRGWLVPVVSIVLVAGALSLLASAWPD
GLERVAEDLGFIKLSEEVRISVPTPLADYGIEGLGAIGTSIAGLLGAAVCFAVAFGIAKVVRPKNA

Specific function: Unknown

COG id: COG0310

COG function: function code P; ABC-type Co2+ transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002751 [H]

Pfam domain/function: PF01891 CbiM [H]

EC number: NA

Molecular weight: Translated: 30821; Mature: 30821

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIPDGFVSVPVAGATSLVSLAGLLVASGRSQTAFGIRRAPILGLTTAFIFAAQMINFPV
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCC
AGGTSGHLLGGTLAAIVLGSPWAGSLCIATVLIIQAVLFADGGITALGANILNMGFIGVW
CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
VGWMLTQTLQRLFGGSKARLPLAAGIAAAVSVVVAAIACAIELVISGTASIAVLPAMTGV
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
HILIGIGEGLITGGVLTYLAKARPDLLPGEQEEFRGWLVPVVSIVLVAGALSLLASAWPD
EEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
GLERVAEDLGFIKLSEEVRISVPTPLADYGIEGLGAIGTSIAGLLGAAVCFAVAFGIAKV
HHHHHHHHCCCEEECCCEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRPKNA
HCCCCC
>Mature Secondary Structure
MHIPDGFVSVPVAGATSLVSLAGLLVASGRSQTAFGIRRAPILGLTTAFIFAAQMINFPV
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCC
AGGTSGHLLGGTLAAIVLGSPWAGSLCIATVLIIQAVLFADGGITALGANILNMGFIGVW
CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
VGWMLTQTLQRLFGGSKARLPLAAGIAAAVSVVVAAIACAIELVISGTASIAVLPAMTGV
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
HILIGIGEGLITGGVLTYLAKARPDLLPGEQEEFRGWLVPVVSIVLVAGALSLLASAWPD
EEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
GLERVAEDLGFIKLSEEVRISVPTPLADYGIEGLGAIGTSIAGLLGAAVCFAVAFGIAKV
HHHHHHHHCCCEEECCCEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRPKNA
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]