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The map label for this gene is ygaP [C]

Identifier: 17231397

GI number: 17231397

Start: 4708605

End: 4709138

Strand: Direct

Name: ygaP [C]

Synonym: alr3905

Alternate gene names: 17231397

Gene position: 4708605-4709138 (Clockwise)

Preceding gene: 17231396

Following gene: 17231398

Centisome position: 73.41

GC content: 42.7

Gene sequence:

>534_bases
ATGACAAACACTAAAAATTTGACGGAAATCGATGCAATCACACTTAAGCAATGGATAGAGGATAATACAGTTATATTAAT
TGATGTGCGCGAAGCGGCGGAGTATGCAGCAGAACATATTCCTGATGCAAAGCTACTTCCTTTATCTAATTTTCGTGCTG
ACCAAGTAACACCACAAAGTGAAAACATCGTTTTATATTGTCGTTCAGGGAATCGTTCCAATCAAGCTTTGCAGAAATTG
ATAGATGCGGGTGTTAGCAACGTCTATCAACTCCAAGGCGGTCTACCCACCTGGAAAGCAGCAGGTTTACCCACAAAAAT
TAACCTCAGCGCCCCTATTAGCTTGATGCGACAAGTACAAATTGTTGCAGGTTCCTTAGTCTTTCTAGGAACAGTATTAG
GTGCGTTTGTCTCACCTTGGTTCTTAATTTTGAGTGGGTTTGTTGGTGCTGGGTTGGTGTTTGCTGGGGTGACGAATACC
TGTGCGATGGGTATTTTACTGGCGAAACTACCTTATAACCGTCGGATGGCGTAA

Upstream 100 bases:

>100_bases
GGAAGCTGTGCCAGCAAACCAGCGCTGCGGCAATGTGGCGATGACTACTCTTTGAGTTTCAGGGTTTAGAGATTAGTATT
TTTGACAAGGAATTAAAACA

Downstream 100 bases:

>100_bases
ATATGACTTGGATAATTGGTCATCTTCTCGCCGTTGGTATTGGCATTAGTTTGGGGCTACTGGGTGGGGGTGGTTCGGTG
CTGGCTTTACCTGTGTTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MTNTKNLTEIDAITLKQWIEDNTVILIDVREAAEYAAEHIPDAKLLPLSNFRADQVTPQSENIVLYCRSGNRSNQALQKL
IDAGVSNVYQLQGGLPTWKAAGLPTKINLSAPISLMRQVQIVAGSLVFLGTVLGAFVSPWFLILSGFVGAGLVFAGVTNT
CAMGILLAKLPYNRRMA

Sequences:

>Translated_177_residues
MTNTKNLTEIDAITLKQWIEDNTVILIDVREAAEYAAEHIPDAKLLPLSNFRADQVTPQSENIVLYCRSGNRSNQALQKL
IDAGVSNVYQLQGGLPTWKAAGLPTKINLSAPISLMRQVQIVAGSLVFLGTVLGAFVSPWFLILSGFVGAGLVFAGVTNT
CAMGILLAKLPYNRRMA
>Mature_176_residues
TNTKNLTEIDAITLKQWIEDNTVILIDVREAAEYAAEHIPDAKLLPLSNFRADQVTPQSENIVLYCRSGNRSNQALQKLI
DAGVSNVYQLQGGLPTWKAAGLPTKINLSAPISLMRQVQIVAGSLVFLGTVLGAFVSPWFLILSGFVGAGLVFAGVTNTC
AMGILLAKLPYNRRMA

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

Organism=Escherichia coli, GI1789022, Length=153, Percent_Identity=46.4052287581699, Blast_Score=142, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021309
- InterPro:   IPR001763 [H]

Pfam domain/function: PF11127 DUF2892; PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 19159; Mature: 19027

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNTKNLTEIDAITLKQWIEDNTVILIDVREAAEYAAEHIPDAKLLPLSNFRADQVTPQS
CCCCCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCCEECCCCCCCCCCCCCCC
ENIVLYCRSGNRSNQALQKLIDAGVSNVYQLQGGLPTWKAAGLPTKINLSAPISLMRQVQ
CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHH
IVAGSLVFLGTVLGAFVSPWFLILSGFVGAGLVFAGVTNTCAMGILLAKLPYNRRMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TNTKNLTEIDAITLKQWIEDNTVILIDVREAAEYAAEHIPDAKLLPLSNFRADQVTPQS
CCCCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCCEECCCCCCCCCCCCCCC
ENIVLYCRSGNRSNQALQKLIDAGVSNVYQLQGGLPTWKAAGLPTKINLSAPISLMRQVQ
CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHH
IVAGSLVFLGTVLGAFVSPWFLILSGFVGAGLVFAGVTNTCAMGILLAKLPYNRRMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]