| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is 17231386
Identifier: 17231386
GI number: 17231386
Start: 4697028
End: 4697531
Strand: Reverse
Name: 17231386
Synonym: all3894
Alternate gene names: NA
Gene position: 4697531-4697028 (Counterclockwise)
Preceding gene: 17231387
Following gene: 17231385
Centisome position: 73.24
GC content: 38.69
Gene sequence:
>504_bases GTGGTGATTTTTCCAACTCGCAGTCTGGAACCAAGGGACACAATAACTCATCGCATATTTTTAAACAGCGACCAAGTGCA GCGCATTTATTTGGATGAATTAGTTACTTCTGATACTCTGCCAATCAGCATCAACTTAATGCTGTTAACAATTGCATCCT CTGAAACAATGGCAGAGCAAGCCAAGCAACTAATTCAACGAGTAAAATTAGAAGAAACAGGTAGGCTACCAAAAAACGAA ATCATCGAAATTATTACGACAATTGCTGTTTACAAGTTTTCGTCTTTGAGTCGACAGGAAGTAGAAGCTATGCTAGGAAT AACTTTAGAGCAAACAAGAGTATATCAAGAAGCTAAAGCTGAGGGTCGAGAAGAAGGTCGAGAAGAAGGTCGAGAAGAAC TGTTGAAAGTTGCTGTCCCACTGTTACTAAAAACTGGGATGAGTGTAGAACAGATTGCTCAACAATTTAATATTGCTGTG GAATCTGTAGAGAAATACAGATAA
Upstream 100 bases:
>100_bases CTCTATCCCCTTGTGGGTAGAGTTTTTATATCATCGCTTTTTTACCGAGTCGCTAACCTATTTGTACCGTAATCAGTCCC AGTATGATGACTGGTATTGT
Downstream 100 bases:
>100_bases GATTACCTTTGATGAGTCATGGCGATCGCACTTTATCTTACCTAATAATTGACTAAACAGCCGCCAAGAGCGATCGCCTT CACATTTGGCGTATCAGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MVIFPTRSLEPRDTITHRIFLNSDQVQRIYLDELVTSDTLPISINLMLLTIASSETMAEQAKQLIQRVKLEETGRLPKNE IIEIITTIAVYKFSSLSRQEVEAMLGITLEQTRVYQEAKAEGREEGREEGREELLKVAVPLLLKTGMSVEQIAQQFNIAV ESVEKYR
Sequences:
>Translated_167_residues MVIFPTRSLEPRDTITHRIFLNSDQVQRIYLDELVTSDTLPISINLMLLTIASSETMAEQAKQLIQRVKLEETGRLPKNE IIEIITTIAVYKFSSLSRQEVEAMLGITLEQTRVYQEAKAEGREEGREEGREELLKVAVPLLLKTGMSVEQIAQQFNIAV ESVEKYR >Mature_167_residues MVIFPTRSLEPRDTITHRIFLNSDQVQRIYLDELVTSDTLPISINLMLLTIASSETMAEQAKQLIQRVKLEETGRLPKNE IIEIITTIAVYKFSSLSRQEVEAMLGITLEQTRVYQEAKAEGREEGREEGREELLKVAVPLLLKTGMSVEQIAQQFNIAV ESVEKYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19080; Mature: 19080
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIFPTRSLEPRDTITHRIFLNSDQVQRIYLDELVTSDTLPISINLMLLTIASSETMAEQ CEECCCCCCCCCHHHHEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEEEEECCCHHHHHH AKQLIQRVKLEETGRLPKNEIIEIITTIAVYKFSSLSRQEVEAMLGITLEQTRVYQEAKA HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHH EGREEGREEGREELLKVAVPLLLKTGMSVEQIAQQFNIAVESVEKYR HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVIFPTRSLEPRDTITHRIFLNSDQVQRIYLDELVTSDTLPISINLMLLTIASSETMAEQ CEECCCCCCCCCHHHHEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEEEEECCCHHHHHH AKQLIQRVKLEETGRLPKNEIIEIITTIAVYKFSSLSRQEVEAMLGITLEQTRVYQEAKA HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHH EGREEGREEGREELLKVAVPLLLKTGMSVEQIAQQFNIAVESVEKYR HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA