Click here to switch to the map view.

The map label for this gene is 17231377

Identifier: 17231377

GI number: 17231377

Start: 4686521

End: 4687309

Strand: Direct

Name: 17231377

Synonym: alr3885

Alternate gene names: NA

Gene position: 4686521-4687309 (Clockwise)

Preceding gene: 17231376

Following gene: 17231378

Centisome position: 73.07

GC content: 47.53

Gene sequence:

>789_bases
GTGACTCAACCTGAAGCTTTGCGATCGCTCCTAGAGGCGGTTGCCAATGGTAAAGTTACCCCAGATAAGGCTTTACACTC
TCTCAAAGACTTAGCCTATGAACCTGTGGGTGAGTTTGCCAAAATTGATAATCACCGTCATCTGAGAACTGGTTTCCCAG
AAGTAATTTGGGGGCCAGGTAAAACACCAGAACAAATTGTGCAGATTATGGAGGTGATGCGTCAGCGCAATCCGGTAGTG
ATGGCTACCCGCATTGAACCAAGCGTTTATACTCTATTGCAACCAAAAATTAGAGATTTACGTTACTACGAATTGGCAAG
AATTTGCGCTATCATTCCGCCGACTATCGAACCACGCTTTGCAGGAATTATCAGTATTCTTTCTGCGGGTACTGCTGACT
TACCCGTGGCTGAGGAAGCAGCCGTGACAGCCGAACTGTCTGGTTTTCGTGTACAGCGTCTTTGGGATGTGGGTGTTGCA
GGGATTCATCGCTTGCTGAGTAATCGCCATCTGATTGAATCAGCATCAGTGTTGATTGTCGTCGCGGGGATGGAAGGCGC
GTTACCCAGTGTGGTGGCTGGTTTAGCTAGTTGTCCTGTAATTGCTGTGCCTACTAGTGTGGGTTATGGTGCTAGTTTTG
GCGGTTTAGCACCTTTATTGACAATGCTCAATTCATGTGCAGCTGGTGTAGGCGTAGTCAATATAGATAATGGTTTTGGT
GCAGCCGTGTTGGCTGGGCAAATTTTGCGGACAGCCGAGAAATTGCGGTTGGCATCACAAGAATCTTGA

Upstream 100 bases:

>100_bases
AATCAAAATAGTTAAGTAGGTAATTGGTAATTGGTAAGCAAGAAAACTTTTACCCATTACCCATCACCCATTACCCATCA
CCACATTACCCAAAATTACC

Downstream 100 bases:

>100_bases
GTTATGACATCAAGGTAATTGGGGGAAATAAATTCAAAATTCAAAATTCGTCTTGGAAAGTTGGGCGGGACGGAAACCGA
CACCGCCCACTTTCCGCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MTQPEALRSLLEAVANGKVTPDKALHSLKDLAYEPVGEFAKIDNHRHLRTGFPEVIWGPGKTPEQIVQIMEVMRQRNPVV
MATRIEPSVYTLLQPKIRDLRYYELARICAIIPPTIEPRFAGIISILSAGTADLPVAEEAAVTAELSGFRVQRLWDVGVA
GIHRLLSNRHLIESASVLIVVAGMEGALPSVVAGLASCPVIAVPTSVGYGASFGGLAPLLTMLNSCAAGVGVVNIDNGFG
AAVLAGQILRTAEKLRLASQES

Sequences:

>Translated_262_residues
MTQPEALRSLLEAVANGKVTPDKALHSLKDLAYEPVGEFAKIDNHRHLRTGFPEVIWGPGKTPEQIVQIMEVMRQRNPVV
MATRIEPSVYTLLQPKIRDLRYYELARICAIIPPTIEPRFAGIISILSAGTADLPVAEEAAVTAELSGFRVQRLWDVGVA
GIHRLLSNRHLIESASVLIVVAGMEGALPSVVAGLASCPVIAVPTSVGYGASFGGLAPLLTMLNSCAAGVGVVNIDNGFG
AAVLAGQILRTAEKLRLASQES
>Mature_261_residues
TQPEALRSLLEAVANGKVTPDKALHSLKDLAYEPVGEFAKIDNHRHLRTGFPEVIWGPGKTPEQIVQIMEVMRQRNPVVM
ATRIEPSVYTLLQPKIRDLRYYELARICAIIPPTIEPRFAGIISILSAGTADLPVAEEAAVTAELSGFRVQRLWDVGVAG
IHRLLSNRHLIESASVLIVVAGMEGALPSVVAGLASCPVIAVPTSVGYGASFGGLAPLLTMLNSCAAGVGVVNIDNGFGA
AVLAGQILRTAEKLRLASQES

Specific function: Unknown

COG id: COG1691

COG function: function code R; NCAIR mutase (PurE)-related proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000031 [H]

Pfam domain/function: PF00731 AIRC [H]

EC number: NA

Molecular weight: Translated: 27889; Mature: 27758

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPEALRSLLEAVANGKVTPDKALHSLKDLAYEPVGEFAKIDNHRHLRTGFPEVIWGPG
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCHHCCCCCEEECCC
KTPEQIVQIMEVMRQRNPVVMATRIEPSVYTLLQPKIRDLRYYELARICAIIPPTIEPRF
CCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHH
AGIISILSAGTADLPVAEEAAVTAELSGFRVQRLWDVGVAGIHRLLSNRHLIESASVLIV
HHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEE
VAGMEGALPSVVAGLASCPVIAVPTSVGYGASFGGLAPLLTMLNSCAAGVGVVNIDNGFG
EECCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCC
AAVLAGQILRTAEKLRLASQES
HHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TQPEALRSLLEAVANGKVTPDKALHSLKDLAYEPVGEFAKIDNHRHLRTGFPEVIWGPG
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCHHCCCCCEEECCC
KTPEQIVQIMEVMRQRNPVVMATRIEPSVYTLLQPKIRDLRYYELARICAIIPPTIEPRF
CCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHH
AGIISILSAGTADLPVAEEAAVTAELSGFRVQRLWDVGVAGIHRLLSNRHLIESASVLIV
HHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEE
VAGMEGALPSVVAGLASCPVIAVPTSVGYGASFGGLAPLLTMLNSCAAGVGVVNIDNGFG
EECCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCC
AAVLAGQILRTAEKLRLASQES
HHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]