Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is 17231355

Identifier: 17231355

GI number: 17231355

Start: 4662782

End: 4663567

Strand: Direct

Name: 17231355

Synonym: alr3863

Alternate gene names: NA

Gene position: 4662782-4663567 (Clockwise)

Preceding gene: 17231350

Following gene: 17231356

Centisome position: 72.7

GC content: 40.71

Gene sequence:

>786_bases
ATGACCGCAAGTAATCCTACAATTTTAGCCCTGGATTTTGATGGGGTAATTTGTGATGGACTAATCGAATATTTTGAAGT
AGCTTGGCGCACCTACTGTCAAATTTGGTCGCCTGCTGAGAACACACCACCAGATGATTTGGCTTTGAGGTTTTATCGAC
TCCGACCTGTAATTGAAACAGGTTGGGAAATGCCTGTTTTAATCAAAGCTTTAGTAGATGGAAATTCTGATGACCAGATT
CTTCAGGAATGGACAAGCATTACCCCCAAGATTTTATTAGATGACAAGCTACAAGCAAAAGAAATTGCTACGAAATTAGA
TGGCTTGCGTGATGAGTGGATTGCTAACGATTTAGATGGTTGGTTGAGTCTGCATAGATTTTATCAGGGTGTAATTGAAA
AACTGAAAATCGCTGTTGCCAGTGAAGTCAAGCTATATATTGTGACTACCAAAGAAGGACGCTTTGTAGAGCAGTTGTTG
CATCAGGAAGGTGTAGATTTACCACGAGATGCAATTTTTGGTAAAGAAGTCAAGCGTCCTAAGTATGAAATTATCCGCGA
ATTAATTCAAGCAGCAGACCATGAACCAGTGAGTTTATGGTTTGTAGAAGACAGAATCAAAACATTACAGCTCGTTCAAC
AGCAGTCAGACCTTGAAGATGTCAAGCTTTTCTTGGCAGACTGGGGCTATAATACCCAATCAGAGAGAAAAGCAGCCCAA
AGTGATCCGCGAATTCAACTATTATCCCTGTCTCAGTTTGCTAAAGATTTTCCTGGGTGGGTGTGA

Upstream 100 bases:

>100_bases
CCCTACACCCCCACACCCCTAAAGCTAATCGCTTCCGTGATTACAGAAAATAAATACTGAATCAGTTAAGCTGGCAAAAG
CAGTATTCATTTTCTAAACA

Downstream 100 bases:

>100_bases
GAAAGGGGTGTAAGGGTGTAGGGGTGTAAGGGAGCAGGGGAAGTAAGGAAGAATAACTATGGACTGTTGAGTAATGAGTG
ATGAGTAATGACAACTGACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MTASNPTILALDFDGVICDGLIEYFEVAWRTYCQIWSPAENTPPDDLALRFYRLRPVIETGWEMPVLIKALVDGNSDDQI
LQEWTSITPKILLDDKLQAKEIATKLDGLRDEWIANDLDGWLSLHRFYQGVIEKLKIAVASEVKLYIVTTKEGRFVEQLL
HQEGVDLPRDAIFGKEVKRPKYEIIRELIQAADHEPVSLWFVEDRIKTLQLVQQQSDLEDVKLFLADWGYNTQSERKAAQ
SDPRIQLLSLSQFAKDFPGWV

Sequences:

>Translated_261_residues
MTASNPTILALDFDGVICDGLIEYFEVAWRTYCQIWSPAENTPPDDLALRFYRLRPVIETGWEMPVLIKALVDGNSDDQI
LQEWTSITPKILLDDKLQAKEIATKLDGLRDEWIANDLDGWLSLHRFYQGVIEKLKIAVASEVKLYIVTTKEGRFVEQLL
HQEGVDLPRDAIFGKEVKRPKYEIIRELIQAADHEPVSLWFVEDRIKTLQLVQQQSDLEDVKLFLADWGYNTQSERKAAQ
SDPRIQLLSLSQFAKDFPGWV
>Mature_260_residues
TASNPTILALDFDGVICDGLIEYFEVAWRTYCQIWSPAENTPPDDLALRFYRLRPVIETGWEMPVLIKALVDGNSDDQIL
QEWTSITPKILLDDKLQAKEIATKLDGLRDEWIANDLDGWLSLHRFYQGVIEKLKIAVASEVKLYIVTTKEGRFVEQLLH
QEGVDLPRDAIFGKEVKRPKYEIIRELIQAADHEPVSLWFVEDRIKTLQLVQQQSDLEDVKLFLADWGYNTQSERKAAQS
DPRIQLLSLSQFAKDFPGWV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30077; Mature: 29945

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASNPTILALDFDGVICDGLIEYFEVAWRTYCQIWSPAENTPPDDLALRFYRLRPVIET
CCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHC
GWEMPVLIKALVDGNSDDQILQEWTSITPKILLDDKLQAKEIATKLDGLRDEWIANDLDG
CCCHHHHHHHHHCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCHHHHHHHHHHHH
WLSLHRFYQGVIEKLKIAVASEVKLYIVTTKEGRFVEQLLHQEGVDLPRDAIFGKEVKRP
HHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCCCCCHHHHCCHHHCCC
KYEIIRELIQAADHEPVSLWFVEDRIKTLQLVQQQSDLEDVKLFLADWGYNTQSERKAAQ
HHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHC
SDPRIQLLSLSQFAKDFPGWV
CCCCEEEEHHHHHHHHCCCCC
>Mature Secondary Structure 
TASNPTILALDFDGVICDGLIEYFEVAWRTYCQIWSPAENTPPDDLALRFYRLRPVIET
CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHC
GWEMPVLIKALVDGNSDDQILQEWTSITPKILLDDKLQAKEIATKLDGLRDEWIANDLDG
CCCHHHHHHHHHCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCHHHHHHHHHHHH
WLSLHRFYQGVIEKLKIAVASEVKLYIVTTKEGRFVEQLLHQEGVDLPRDAIFGKEVKRP
HHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCCCCCHHHHCCHHHCCC
KYEIIRELIQAADHEPVSLWFVEDRIKTLQLVQQQSDLEDVKLFLADWGYNTQSERKAAQ
HHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHC
SDPRIQLLSLSQFAKDFPGWV
CCCCEEEEHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA