| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is 17231329
Identifier: 17231329
GI number: 17231329
Start: 4635944
End: 4636774
Strand: Reverse
Name: 17231329
Synonym: all3837
Alternate gene names: NA
Gene position: 4636774-4635944 (Counterclockwise)
Preceding gene: 17231330
Following gene: 17231328
Centisome position: 72.29
GC content: 38.87
Gene sequence:
>831_bases GTGCAAACAGACAAAATATTCTACAGCTTGTTTCAAGCGTTCCCCAGCATATTTTTTGCCATCATTGGGGAAACAGATAT TAATCCCAGTACCTATGAGTTTGTCTCAGTGGAACTAAAGGAAACTGCTTTTCGCATTGATGGGGTATTTAAACCTGTTA ATGAAAGCACAGAAGAACCCCTATATTTTGTTGAAGTTCAGTTTCAACTAGATCCTAAATTTTATAGACGCTTCTTTGCC GAAATCTTTCTTTATCTCCGTCAAAACCCATCTGTTAACTTTTGGCGTGCTGTTGTCATTTATCCCCAACGCATCATAGA ACCGGATGATCAACAACCTTATCGTTTGATTTTGGATAGTTCCCAAATACAACGCATTTATTTAGATGAGTTAGGGACGG CTAGCGAAAACTCTCTGCAATTAGCGATCGTGCAACTAATTATTGCCAGTGAAGCAACAGCTATTGACCAAGGTAGACAA CTGATTATACAGGCAAGGCAAGAACTGACCGATGAAGCAAACAAAAAACAAATTGTAGAATTAATAGAAACTATCTTGTT GTACAAATTCACCAACTTAAGCCGAGAGGAGGTAGCAGCTATGTTGGGTATAGATGATGAATTCAAAAAAACTAGGATGT ATCAGTCTATTAAGGAAGATGGACTAGAAGAAGGTAGACAAGAAGGTAGACAGGAAGGTAGACAAGAAGGTAAGTTACAA GCAAAGTTAGAGGCTATTCCTCGGTTACTGGCCTTGGGGTTGAATGTAGAACAGATAGCAGGTGCTTTGGATTTGACGAT TGAGCAAGTTCAGGAAGTTGTAGAAAATTAG
Upstream 100 bases:
>100_bases GATGGAGTTTTGGAGGCGATCGCTCCAGTTTAAAACTTGAAGTTTCGTGTTTAGAAGTGGAATGATGGAGTTGTAAGAAC GAAATTACGAATTATTCCAG
Downstream 100 bases:
>100_bases TAGATTTTTACTGAATATTTCTCATCAGAGATTCGTCACTTTCCAGTCACATTTGCTTGTAACCCTAGCAATGTAGGCAT TCCCAAACTATTATGAACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MQTDKIFYSLFQAFPSIFFAIIGETDINPSTYEFVSVELKETAFRIDGVFKPVNESTEEPLYFVEVQFQLDPKFYRRFFA EIFLYLRQNPSVNFWRAVVIYPQRIIEPDDQQPYRLILDSSQIQRIYLDELGTASENSLQLAIVQLIIASEATAIDQGRQ LIIQARQELTDEANKKQIVELIETILLYKFTNLSREEVAAMLGIDDEFKKTRMYQSIKEDGLEEGRQEGRQEGRQEGKLQ AKLEAIPRLLALGLNVEQIAGALDLTIEQVQEVVEN
Sequences:
>Translated_276_residues MQTDKIFYSLFQAFPSIFFAIIGETDINPSTYEFVSVELKETAFRIDGVFKPVNESTEEPLYFVEVQFQLDPKFYRRFFA EIFLYLRQNPSVNFWRAVVIYPQRIIEPDDQQPYRLILDSSQIQRIYLDELGTASENSLQLAIVQLIIASEATAIDQGRQ LIIQARQELTDEANKKQIVELIETILLYKFTNLSREEVAAMLGIDDEFKKTRMYQSIKEDGLEEGRQEGRQEGRQEGKLQ AKLEAIPRLLALGLNVEQIAGALDLTIEQVQEVVEN >Mature_276_residues MQTDKIFYSLFQAFPSIFFAIIGETDINPSTYEFVSVELKETAFRIDGVFKPVNESTEEPLYFVEVQFQLDPKFYRRFFA EIFLYLRQNPSVNFWRAVVIYPQRIIEPDDQQPYRLILDSSQIQRIYLDELGTASENSLQLAIVQLIIASEATAIDQGRQ LIIQARQELTDEANKKQIVELIETILLYKFTNLSREEVAAMLGIDDEFKKTRMYQSIKEDGLEEGRQEGRQEGRQEGKLQ AKLEAIPRLLALGLNVEQIAGALDLTIEQVQEVVEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31888; Mature: 31888
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTDKIFYSLFQAFPSIFFAIIGETDINPSTYEFVSVELKETAFRIDGVFKPVNESTEEP CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCC LYFVEVQFQLDPKFYRRFFAEIFLYLRQNPSVNFWRAVVIYPQRIIEPDDQQPYRLILDS EEEEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCEEHEEEEHHHHCCCCCCCCCEEEECC SQIQRIYLDELGTASENSLQLAIVQLIIASEATAIDQGRQLIIQARQELTDEANKKQIVE HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LIETILLYKFTNLSREEVAAMLGIDDEFKKTRMYQSIKEDGLEEGRQEGRQEGRQEGKLQ HHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH AKLEAIPRLLALGLNVEQIAGALDLTIEQVQEVVEN HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQTDKIFYSLFQAFPSIFFAIIGETDINPSTYEFVSVELKETAFRIDGVFKPVNESTEEP CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCC LYFVEVQFQLDPKFYRRFFAEIFLYLRQNPSVNFWRAVVIYPQRIIEPDDQQPYRLILDS EEEEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCEEHEEEEHHHHCCCCCCCCCEEEECC SQIQRIYLDELGTASENSLQLAIVQLIIASEATAIDQGRQLIIQARQELTDEANKKQIVE HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LIETILLYKFTNLSREEVAAMLGIDDEFKKTRMYQSIKEDGLEEGRQEGRQEGRQEGKLQ HHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH AKLEAIPRLLALGLNVEQIAGALDLTIEQVQEVVEN HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA