| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231318
Identifier: 17231318
GI number: 17231318
Start: 4624996
End: 4625721
Strand: Reverse
Name: 17231318
Synonym: all3826
Alternate gene names: NA
Gene position: 4625721-4624996 (Counterclockwise)
Preceding gene: 17231327
Following gene: 17231314
Centisome position: 72.12
GC content: 44.21
Gene sequence:
>726_bases ATGTGGTGTGGGTTTGGAAAATCAAGTGCAGTAATTGCTACAGCTTGTGTAATTAGTGCTAGTTTTGTAATTTCAAATAC AACTTTTGCAGATCGTCAGCGTAATTATACGCCACAGGAATTTCGTACAGTTTTACGAGGTTTAGGCTATAACGTCAAGG TGACAAACACGCCTCTCAGCGACGCAGAAACTAAAAAAGCTATCAGTGAATTTCAAAAAGGTTACAAGCTTACCCCAGTT GATGGGATTGCAGGGCCAAAAACCCAAGACTTTGCTGCAAATATCGTTCAAATCTTGCAAGCAAACTTAAATGCAGTCCT AAAAACAAATCCCCCTTTACCTCGTGATCAATTTTACGGCCCCAAAACTGAAGCAGCTATTAAAGAATTTCAGAAAAAAC ATCAGCTAGAAGCAACTGGTATTGCTAATTTAGCTCTTCGTCAAAAGTTGGACGAAGAAGCCAAAAAAGTCATCAGTAAA CCGAGTACTCAACCAACGGTGAAGCCGTCGCCATCACCGACAGCCAAACCTACAGCATCACCGACAGCTAAACCAGCAGC ATCGCCAACATCTAAACCTACAACATCACCTGCGCCAACGAAATCGCCGGCAACTACACCAACAGTATCACCCTCACCAA CGGAATCGCCAACAGCTAAACCGGAGGCATCACCCTCGCCAACGGAATCACCCTCACCAACAGCATCGCCGACAACTACA CCTTAA
Upstream 100 bases:
>100_bases AAAATTATGAACAACTTAGACAAATACTGTAAAGCAAAGTAAAATTGTCCTCTTGTTTACGTCTATCAATTTTTTGGTTT AACTCAAAGGAGTTTTAAAT
Downstream 100 bases:
>100_bases ATAACGCTAAAAACCCCCTATACCCAAACCTCAGTTCTTTTGATTTGGTTCTTCGAGGGGTCTACCTTTTGGTATAGGTA AGATTGGACGGCGATCATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MWCGFGKSSAVIATACVISASFVISNTTFADRQRNYTPQEFRTVLRGLGYNVKVTNTPLSDAETKKAISEFQKGYKLTPV DGIAGPKTQDFAANIVQILQANLNAVLKTNPPLPRDQFYGPKTEAAIKEFQKKHQLEATGIANLALRQKLDEEAKKVISK PSTQPTVKPSPSPTAKPTASPTAKPAASPTSKPTTSPAPTKSPATTPTVSPSPTESPTAKPEASPSPTESPSPTASPTTT P
Sequences:
>Translated_241_residues MWCGFGKSSAVIATACVISASFVISNTTFADRQRNYTPQEFRTVLRGLGYNVKVTNTPLSDAETKKAISEFQKGYKLTPV DGIAGPKTQDFAANIVQILQANLNAVLKTNPPLPRDQFYGPKTEAAIKEFQKKHQLEATGIANLALRQKLDEEAKKVISK PSTQPTVKPSPSPTAKPTASPTAKPAASPTSKPTTSPAPTKSPATTPTVSPSPTESPTAKPEASPSPTESPSPTASPTTT P >Mature_241_residues MWCGFGKSSAVIATACVISASFVISNTTFADRQRNYTPQEFRTVLRGLGYNVKVTNTPLSDAETKKAISEFQKGYKLTPV DGIAGPKTQDFAANIVQILQANLNAVLKTNPPLPRDQFYGPKTEAAIKEFQKKHQLEATGIANLALRQKLDEEAKKVISK PSTQPTVKPSPSPTAKPTASPTAKPAASPTSKPTTSPAPTKSPATTPTVSPSPTESPTAKPEASPSPTESPSPTASPTTT P
Specific function: Unknown
COG id: COG3409
COG function: function code M; Putative peptidoglycan-binding domain-containing protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25429; Mature: 25429
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWCGFGKSSAVIATACVISASFVISNTTFADRQRNYTPQEFRTVLRGLGYNVKVTNTPLS CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCC DAETKKAISEFQKGYKLTPVDGIAGPKTQDFAANIVQILQANLNAVLKTNPPLPRDQFYG HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCC PKTEAAIKEFQKKHQLEATGIANLALRQKLDEEAKKVISKPSTQPTVKPSPSPTAKPTAS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC PTAKPAASPTSKPTTSPAPTKSPATTPTVSPSPTESPTAKPEASPSPTESPSPTASPTTT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC P C >Mature Secondary Structure MWCGFGKSSAVIATACVISASFVISNTTFADRQRNYTPQEFRTVLRGLGYNVKVTNTPLS CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCC DAETKKAISEFQKGYKLTPVDGIAGPKTQDFAANIVQILQANLNAVLKTNPPLPRDQFYG HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCC PKTEAAIKEFQKKHQLEATGIANLALRQKLDEEAKKVISKPSTQPTVKPSPSPTAKPTAS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC PTAKPAASPTSKPTTSPAPTKSPATTPTVSPSPTESPTAKPEASPSPTESPSPTASPTTT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC P C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA