Click here to switch to the map view.

The map label for this gene is 17231316

Identifier: 17231316

GI number: 17231316

Start: 4623178

End: 4623978

Strand: Direct

Name: 17231316

Synonym: alr3824

Alternate gene names: NA

Gene position: 4623178-4623978 (Clockwise)

Preceding gene: 17231315

Following gene: 17231317

Centisome position: 72.08

GC content: 43.2

Gene sequence:

>801_bases
ATGACTACTTTCTCTAACTACGTCCCCCAATCTGACCCGCCGCGTCCTCCGTGGGAAACCCTACCAACAATGTATGATTT
ACCTAGCGACAACCCAGAGGAGCCAGGCTTGCCAGACGATTTCCATTTTTTACAGCCCTTACTTTTATACTTAACCTTTC
AACCAATTAACTGGAATCCCGAATTAGTTTACAGTGCGGCTGACCTGAATCTTTATTACGATCTTGATCATCCACTATGG
TACAAACGCCCTGATTGGTTTGGCGTTGTGGGAGTACAAAAACTCTACAAAGGTGAAGATTTGCGTTTAAGTTATGTCAC
TTGGCAAGAACCCGCAAATCCCTTTGTCGTCGTGGAATTATTATCCCCAGGTACAGAAGATGAAGATTTAGGCATTACTC
AAAAGCCAACAGCTAAACCTCCTAGCAAATGGGAAGTTTACGAGCGAATTTTGCGAATCCCTTACTATATTGTGTTTAGT
CGCTACACCAATGAACTGAGAGCTTTTCAGTTAGTAGGTGGTCATTATGAAGCGATAAATTTAACTGAGGGACGTATACT
CATGCCAGAGTTGGGTTTAAGTTTGGGTGTATGGCAAGGAGCGTTTCGAGATATTAACAGGTTGTGGCTACGTTGGTTCA
CCTTAACAGGGGAATTAATTTCTGAGCCGACAGAAGAAGTTGTTGCAGCTACGGAACGAGCAATGATTGCTGAACAGGAA
GTTGAAAAGGCAAAAAGAAAAGCAGAACAACTAGCAGAACGTCTGCGACAACTAGGAGTGAATCCTGATGAGCTAGTGTA
A

Upstream 100 bases:

>100_bases
GTAACAGGGGACAGGTGACAAAATTTCCTTTACACCCTTACTTCATTAGCAGCGCAACTACGAGCAGCAGGTATTGAACC
ACAAGAGTAGACTTTTGACT

Downstream 100 bases:

>100_bases
ACTATGCTTTTCAGATAAACCTGTAGATAGAATTGCGATCGCCTAAAACTTGTCACAATATATTGCGATCGCAATTTTGG
GACAATAAATACTATGGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MTTFSNYVPQSDPPRPPWETLPTMYDLPSDNPEEPGLPDDFHFLQPLLLYLTFQPINWNPELVYSAADLNLYYDLDHPLW
YKRPDWFGVVGVQKLYKGEDLRLSYVTWQEPANPFVVVELLSPGTEDEDLGITQKPTAKPPSKWEVYERILRIPYYIVFS
RYTNELRAFQLVGGHYEAINLTEGRILMPELGLSLGVWQGAFRDINRLWLRWFTLTGELISEPTEEVVAATERAMIAEQE
VEKAKRKAEQLAERLRQLGVNPDELV

Sequences:

>Translated_266_residues
MTTFSNYVPQSDPPRPPWETLPTMYDLPSDNPEEPGLPDDFHFLQPLLLYLTFQPINWNPELVYSAADLNLYYDLDHPLW
YKRPDWFGVVGVQKLYKGEDLRLSYVTWQEPANPFVVVELLSPGTEDEDLGITQKPTAKPPSKWEVYERILRIPYYIVFS
RYTNELRAFQLVGGHYEAINLTEGRILMPELGLSLGVWQGAFRDINRLWLRWFTLTGELISEPTEEVVAATERAMIAEQE
VEKAKRKAEQLAERLRQLGVNPDELV
>Mature_265_residues
TTFSNYVPQSDPPRPPWETLPTMYDLPSDNPEEPGLPDDFHFLQPLLLYLTFQPINWNPELVYSAADLNLYYDLDHPLWY
KRPDWFGVVGVQKLYKGEDLRLSYVTWQEPANPFVVVELLSPGTEDEDLGITQKPTAKPPSKWEVYERILRIPYYIVFSR
YTNELRAFQLVGGHYEAINLTEGRILMPELGLSLGVWQGAFRDINRLWLRWFTLTGELISEPTEEVVAATERAMIAEQEV
EKAKRKAEQLAERLRQLGVNPDELV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30887; Mature: 30756

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTFSNYVPQSDPPRPPWETLPTMYDLPSDNPEEPGLPDDFHFLQPLLLYLTFQPINWNP
CCCCCCCCCCCCCCCCCHHHCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCC
ELVYSAADLNLYYDLDHPLWYKRPDWFGVVGVQKLYKGEDLRLSYVTWQEPANPFVVVEL
CEEEEEECEEEEEECCCCEEECCCCCEEHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEE
LSPGTEDEDLGITQKPTAKPPSKWEVYERILRIPYYIVFSRYTNELRAFQLVGGHYEAIN
ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHEEHHHHHHHHHHHHEECCCEEEEE
LTEGRILMPELGLSLGVWQGAFRDINRLWLRWFTLTGELISEPTEEVVAATERAMIAEQE
ECCCEEECHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
VEKAKRKAEQLAERLRQLGVNPDELV
HHHHHHHHHHHHHHHHHHCCCHHHCC
>Mature Secondary Structure 
TTFSNYVPQSDPPRPPWETLPTMYDLPSDNPEEPGLPDDFHFLQPLLLYLTFQPINWNP
CCCCCCCCCCCCCCCCHHHCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCC
ELVYSAADLNLYYDLDHPLWYKRPDWFGVVGVQKLYKGEDLRLSYVTWQEPANPFVVVEL
CEEEEEECEEEEEECCCCEEECCCCCEEHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEE
LSPGTEDEDLGITQKPTAKPPSKWEVYERILRIPYYIVFSRYTNELRAFQLVGGHYEAIN
ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHEEHHHHHHHHHHHHEECCCEEEEE
LTEGRILMPELGLSLGVWQGAFRDINRLWLRWFTLTGELISEPTEEVVAATERAMIAEQE
ECCCEEECHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
VEKAKRKAEQLAERLRQLGVNPDELV
HHHHHHHHHHHHHHHHHHCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA