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The map label for this gene is dpsA

Identifier: 17231300

GI number: 17231300

Start: 4602026

End: 4602580

Strand: Direct

Name: dpsA

Synonym: alr3808

Alternate gene names: 17231300

Gene position: 4602026-4602580 (Clockwise)

Preceding gene: 17231299

Following gene: 17231301

Centisome position: 71.75

GC content: 41.44

Gene sequence:

>555_bases
ATGGCTGATACACAAACTTTGTTACAAAATTTTGGTCAGGTATACGACAATCCAGTGCTACTGGATCGGAGTGTAACTGC
TCCAGTCACAGAAGGACTAAATGTTCTTCTAGCTAGCTTTCAAGCACTTTATTTGCAATACCAAAAACATCATTTTGTAG
TTGAAGGCGCAGAATTTTACTCACTGCATGAGTTTTTTAACTCCAGCTACAATGAAGTGCAAGACCACGTTCATGAAATT
GGCGAACGGTTGAATGGATTGGGTGGCGTACCGGCTGCATCTTTCAGCAAGTTAGCAGAATTAACCTGTTTTGAACAAGA
ATCTGATGGCGTATATTCTTCCCGTAAGATGGTAGAAAACGACCTAGCAGCAGAACAGGCGATTATCAACGTTATTCGTC
GCCAAGCGGCTCAGGCTGAAAGTTTAGGCGATCGCGGTACACGCTACCTCTACGAAAAAATTCTGTTAAAAACCGAAGAA
AGAGCTTATCATTTAGCTCACTTCTTAGCTAAAGATAGCTTAACCTTAGGATTTGTTCAGCCTGCTCAGAATTAA

Upstream 100 bases:

>100_bases
GAAATTTGTGGTATTGATTAGGCTTGCTTTAATTTTTTAGATGTTAATATGTAGTAACTAAGCAGTTAGCAAATATAACT
GCCCAAAAGCGAGGAGAACA

Downstream 100 bases:

>100_bases
CCTTGGCTTAATCTCAATGTAGTTAATTCTGCTTTAGAGATAATGTCGTCTTAACAAGAAGGAATCTTAAGAAAATGTGA
AAAATGGCAGAGAGAGTTGA

Product: nutrient-stress induced DNA binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MADTQTLLQNFGQVYDNPVLLDRSVTAPVTEGLNVLLASFQALYLQYQKHHFVVEGAEFYSLHEFFNSSYNEVQDHVHEI
GERLNGLGGVPAASFSKLAELTCFEQESDGVYSSRKMVENDLAAEQAIINVIRRQAAQAESLGDRGTRYLYEKILLKTEE
RAYHLAHFLAKDSLTLGFVQPAQN

Sequences:

>Translated_184_residues
MADTQTLLQNFGQVYDNPVLLDRSVTAPVTEGLNVLLASFQALYLQYQKHHFVVEGAEFYSLHEFFNSSYNEVQDHVHEI
GERLNGLGGVPAASFSKLAELTCFEQESDGVYSSRKMVENDLAAEQAIINVIRRQAAQAESLGDRGTRYLYEKILLKTEE
RAYHLAHFLAKDSLTLGFVQPAQN
>Mature_183_residues
ADTQTLLQNFGQVYDNPVLLDRSVTAPVTEGLNVLLASFQALYLQYQKHHFVVEGAEFYSLHEFFNSSYNEVQDHVHEIG
ERLNGLGGVPAASFSKLAELTCFEQESDGVYSSRKMVENDLAAEQAIINVIRRQAAQAESLGDRGTRYLYEKILLKTEER
AYHLAHFLAKDSLTLGFVQPAQN

Specific function: Involved in protection of chromosomal DNA from damage under nutrient-limited and oxidative stress conditions. Binds heme

COG id: COG0783

COG function: function code P; DNA-binding ferritin-like protein (oxidative damage protectant)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dps family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DPSA_NOSS1 (Q8YQL3)

Other databases:

- EMBL:   BA000019
- PIR:   AI2281
- RefSeq:   NP_487848.1
- ProteinModelPortal:   Q8YQL3
- SMR:   Q8YQL3
- GeneID:   1107406
- GenomeReviews:   BA000019_GR
- KEGG:   ana:alr3808
- eggNOG:   COG0783
- HOGENOM:   HBG712946
- OMA:   HVHDLGE
- ProtClustDB:   CLSK896054
- BioCyc:   NSP103690:ALR3808-MONOMER
- InterPro:   IPR002177
- InterPro:   IPR023188
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR008331
- Gene3D:   G3DSA:1.20.1260.10
- PIRSF:   PIRSF005900

Pfam domain/function: PF00210 Ferritin; SSF47240 Ferritin/RR_like

EC number: NA

Molecular weight: Translated: 20687; Mature: 20556

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS00818 DPS_1; PS00819 DPS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTQTLLQNFGQVYDNPVLLDRSVTAPVTEGLNVLLASFQALYLQYQKHHFVVEGAEFY
CCCHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHH
SLHEFFNSSYNEVQDHVHEIGERLNGLGGVPAASFSKLAELTCFEQESDGVYSSRKMVEN
HHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
DLAAEQAIINVIRRQAAQAESLGDRGTRYLYEKILLKTEERAYHLAHFLAKDSLTLGFVQ
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC
PAQN
CCCC
>Mature Secondary Structure 
ADTQTLLQNFGQVYDNPVLLDRSVTAPVTEGLNVLLASFQALYLQYQKHHFVVEGAEFY
CCHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHH
SLHEFFNSSYNEVQDHVHEIGERLNGLGGVPAASFSKLAELTCFEQESDGVYSSRKMVEN
HHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
DLAAEQAIINVIRRQAAQAESLGDRGTRYLYEKILLKTEERAYHLAHFLAKDSLTLGFVQ
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC
PAQN
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840