| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231261
Identifier: 17231261
GI number: 17231261
Start: 4556463
End: 4557185
Strand: Direct
Name: 17231261
Synonym: alr3769
Alternate gene names: NA
Gene position: 4556463-4557185 (Clockwise)
Preceding gene: 17231260
Following gene: 17231262
Centisome position: 71.04
GC content: 45.09
Gene sequence:
>723_bases GTGATTAGAGTGTCAAGCCTAAAAACGATCGCATACTCCCGCGTGATTCACTTAAGTCATATAATTGACCCAGATATTCC CCAATGGCCTGGCGACCCTCCCATTGAATTTACCACTGTTGCCCAACTCCCAGATGATGGCTATTATCTACGGGGCTTCT CAATCGGGGAACACAGCGCCACTCATATCAATGCTCCTAATAGTTTTTATCAAGCAGGTATAGGAATTGACCAATACCCG GCTCAGTCGTTGATTGTGTCTGCGGTAGTTATAGATATCCAAGCAGCCGCAGCCGTCAACGCTGATTATAGACTCACAAT TGATGATATCTTCACCTGGGAAGCAGAACACGGTGAAATTCCTATTGGTAACGTAGTGTTATTACATACTGGTTGGCAGA ATAAATGGTCTGATAAACACGCTTTTCTCAACCAAGATGCTGAAGGAATCATGCACTTTCCGGGTTTTGGTAGCGATGCA ACCCAGTTTCTCTTGGATGAACGGCAAATTACAGGCGTAGGAATTGATACTCATGGTGTAGACCCTGGACAAGATGCCAG TTTTGCTACCAACCGCTTAGTATTGGCGCAACAAGGTATTGTGTTAGAAAATTTGACAAATTTGCATCAACTACCAGCAA AAGGTAGTAATCTGGCGATCGCAATCCTCAGATTACGCGGTGGCTCAGGTTCGCCAGTGGGAGTTTTGGCATTAGTGCCT TGA
Upstream 100 bases:
>100_bases TCCACAGGTGTTAGAAGAGCTGCCATCATGCCAAACTCCTGAGCGATAGGGTCTGCCAAGATAAGTAGTTGGTTCTGATG GTGAGAAATTTCTGAAGTGG
Downstream 100 bases:
>100_bases TAGGGGTGTGGGGGTGTGAGGGTGTAGGGGTGTGGGGGTGTGGGGGTGTAAGGGAAAAATATTTTCATGTTTGGTTGTGT AATTTGCCTGTGATTGGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: Cyclase; Metal-Dependent Hydrolase; Cyclase Family; Kynurenine Formamidase; Polyketide Cyclase; Metal-Dependent Hydrolase/Cyclase; Twin-Arginine Translocation Pathway Signal; Cyclase Superfamily; Arylformamidase; Cyclase Superfamily Protein; Secreted Protein
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MIRVSSLKTIAYSRVIHLSHIIDPDIPQWPGDPPIEFTTVAQLPDDGYYLRGFSIGEHSATHINAPNSFYQAGIGIDQYP AQSLIVSAVVIDIQAAAAVNADYRLTIDDIFTWEAEHGEIPIGNVVLLHTGWQNKWSDKHAFLNQDAEGIMHFPGFGSDA TQFLLDERQITGVGIDTHGVDPGQDASFATNRLVLAQQGIVLENLTNLHQLPAKGSNLAIAILRLRGGSGSPVGVLALVP
Sequences:
>Translated_240_residues MIRVSSLKTIAYSRVIHLSHIIDPDIPQWPGDPPIEFTTVAQLPDDGYYLRGFSIGEHSATHINAPNSFYQAGIGIDQYP AQSLIVSAVVIDIQAAAAVNADYRLTIDDIFTWEAEHGEIPIGNVVLLHTGWQNKWSDKHAFLNQDAEGIMHFPGFGSDA TQFLLDERQITGVGIDTHGVDPGQDASFATNRLVLAQQGIVLENLTNLHQLPAKGSNLAIAILRLRGGSGSPVGVLALVP >Mature_240_residues MIRVSSLKTIAYSRVIHLSHIIDPDIPQWPGDPPIEFTTVAQLPDDGYYLRGFSIGEHSATHINAPNSFYQAGIGIDQYP AQSLIVSAVVIDIQAAAAVNADYRLTIDDIFTWEAEHGEIPIGNVVLLHTGWQNKWSDKHAFLNQDAEGIMHFPGFGSDA TQFLLDERQITGVGIDTHGVDPGQDASFATNRLVLAQQGIVLENLTNLHQLPAKGSNLAIAILRLRGGSGSPVGVLALVP
Specific function: Unknown
COG id: COG1878
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25948; Mature: 25948
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRVSSLKTIAYSRVIHLSHIIDPDIPQWPGDPPIEFTTVAQLPDDGYYLRGFSIGEHSA CEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCC THINAPNSFYQAGIGIDQYPAQSLIVSAVVIDIQAAAAVNADYRLTIDDIFTWEAEHGEI EEECCCCHHHHCCCCCCCCCHHHHHHHHHEEEEEHHEEECCCEEEEEHHEEEEECCCCCC PIGNVVLLHTGWQNKWSDKHAFLNQDAEGIMHFPGFGSDATQFLLDERQITGVGIDTHGV CCCCEEEEECCCCCCCCCCHHHHCCCCCCEEECCCCCCHHHHHHHCCCEEEEECCCCCCC DPGQDASFATNRLVLAQQGIVLENLTNLHQLPAKGSNLAIAILRLRGGSGSPVGVLALVP CCCCCCCHHHCEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCEEEEEECC >Mature Secondary Structure MIRVSSLKTIAYSRVIHLSHIIDPDIPQWPGDPPIEFTTVAQLPDDGYYLRGFSIGEHSA CEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCC THINAPNSFYQAGIGIDQYPAQSLIVSAVVIDIQAAAAVNADYRLTIDDIFTWEAEHGEI EEECCCCHHHHCCCCCCCCCHHHHHHHHHEEEEEHHEEECCCEEEEEHHEEEEECCCCCC PIGNVVLLHTGWQNKWSDKHAFLNQDAEGIMHFPGFGSDATQFLLDERQITGVGIDTHGV CCCCEEEEECCCCCCCCCCHHHHCCCCCCEEECCCCCCHHHHHHHCCCEEEEECCCCCCC DPGQDASFATNRLVLAQQGIVLENLTNLHQLPAKGSNLAIAILRLRGGSGSPVGVLALVP CCCCCCCHHHCEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA