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The map label for this gene is p49 [H]

Identifier: 17231236

GI number: 17231236

Start: 4520073

End: 4521770

Strand: Reverse

Name: p49 [H]

Synonym: all3744

Alternate gene names: 17231236

Gene position: 4521770-4520073 (Counterclockwise)

Preceding gene: 17231237

Following gene: 17231235

Centisome position: 70.5

GC content: 43.23

Gene sequence:

>1698_bases
ATGCAAGAATATGATGTTGTAATGATTGGTGCAGGACATAACGGGCTAGTTTGTGCCGCTTATTTGCTGAAAGCTGGCTA
TAGTGTCCTGCTACTCGAAAAGCGTTCTGTTCCTGGTGGTGCAGCTACAACAGAGGAGTGTTTGCCAAAAGAAGCACCAG
GGTTTAAATTTAATTTGTGTGCCATTGATCACGAATTTATTCACTTGGGGCCAGTTGTTGAGGAATTAGAACTGGGGAAA
TATGGCTTGGAATATTTAGAGTGTGATCCAGTTGTATTTTGTCCTCATCCTGATGGTAAGTATTTTTTGGCTCATAAATC
TTTAGAAAAAACTTGTGCAGAAATCGCTCGGTACAGCGAACGTGATGCTAAAAAATACGCCGAGTTTACCGAATATTGGC
AACGGGCAATAGGTGCAATGATTCCTATGTTTAATGCCCCGCCAAAATCAATTATTGATATTGTTGGTAATTACGATATC
ACGAAATTCAAGGATTTATTTTCAGTCATCGGTTCTCCTAACAAAACGCTGGACTTCATTCGCAATATGTTAACCAGCGC
AGAAGATATTCTCAATGAGTGGTTTGATTCGGAATTTCTCAAAGCACCCCTAGCAAGATTAGCATCAGAACTCGGCGCAC
CACCATCCCAAAAAACGATCGCTATTGGTGCAATCATGATGGCAATGCGTCACAATCCGGGGATGGCTAGACCTCGCGGC
GGTACTGGCGCATTAATTAAAGCGTTAGTAAATTTAGTCATAAGTAAAGGCGGTGTGATTCTCACAGACCAACAAGTCGA
AAAAGTTTTAATTGATGACGGTAAAGCCGTTGGTGTGCGGGTAAGTGGTGGTACAGAATATCGTGCTAAATATGGTGTGA
TTTCTAACATCGACGCAAAACGGTTATTTTTGCAAATGACCGATAAAAGTGATGTAGATGCAGCCGACCCAGATTTATGG
GAAAGATTGGAACGGCGCATTGTCAACAACAACGAAACCATTCTCAAGATAGATTTGGCCTTAGATGAACCCTTGCGTTT
TCCTTTCCACGCCCATAAAGATGAATACTTGGTTGGGTCTATTTTAATTGCTGATTCTGTAGCCCATGTGGAACAAGCAC
ATAGTAAATGTACATTGGGAGAGATTCCTGATTCCGACCCATCGATGTACGTAGTTATGCCTAGCTATCTCGACCCCACA
TTAGCACCTTCTGGCAAACATACAGTCTGGATTGAGTTTTTCGCCCCTTATCAAATTGCTGGTGCAGAAGGTACCGGTTT
CAAAGGTACTGGTTGGACGGACGAATTGAAAAACCAAGTTGCAGACAAGGTAGTTGATAAACTGGCTACCTATGCGCCAA
ATGTCAAAACAGCCACTATTGCCCGTCGTGTAGAAAGCCCGGCGGAATTGGGAGAAAGACTAGGCGCATACAAAGGTAAT
TACTACCATATTGATATGACCTTGGATCAAATGGTCTTTTTCCGTCCTTTGCCAGAAATAGCCAACTACAAGACCCCCAT
CGATAATCTATTTCTCACTGGTGCAGGTACTCATCCCGGTGGTTCGATTTCGGGAATGCCAGGACGCAACTGTGCGCGGG
TATTTTTGCAGACTAAGCACCCCATTACTCAGACTCTCAAGGATGCCAGGGATTCGATTAAATCAACGGTTGGGTCGGTT
TTTGGGATTAATCAATAG

Upstream 100 bases:

>100_bases
GTAAGATTACCTGTAGTTTATTTACTAATAACTATCAAAGTTGTAATTTCGTTTCACCCTTTGTAATATTATCAAGCCAC
TCTAATTCAAGATAACAAAT

Downstream 100 bases:

>100_bases
TCTGTGGTCAACGGTTGACAGTTAACGGTTGACGGTTGACTACTGACGACAAACTTTAATCGTATTTAGCTATAATACCA
ACTAGTTATTAAACGCTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 565; Mature: 565

Protein sequence:

>565_residues
MQEYDVVMIGAGHNGLVCAAYLLKAGYSVLLLEKRSVPGGAATTEECLPKEAPGFKFNLCAIDHEFIHLGPVVEELELGK
YGLEYLECDPVVFCPHPDGKYFLAHKSLEKTCAEIARYSERDAKKYAEFTEYWQRAIGAMIPMFNAPPKSIIDIVGNYDI
TKFKDLFSVIGSPNKTLDFIRNMLTSAEDILNEWFDSEFLKAPLARLASELGAPPSQKTIAIGAIMMAMRHNPGMARPRG
GTGALIKALVNLVISKGGVILTDQQVEKVLIDDGKAVGVRVSGGTEYRAKYGVISNIDAKRLFLQMTDKSDVDAADPDLW
ERLERRIVNNNETILKIDLALDEPLRFPFHAHKDEYLVGSILIADSVAHVEQAHSKCTLGEIPDSDPSMYVVMPSYLDPT
LAPSGKHTVWIEFFAPYQIAGAEGTGFKGTGWTDELKNQVADKVVDKLATYAPNVKTATIARRVESPAELGERLGAYKGN
YYHIDMTLDQMVFFRPLPEIANYKTPIDNLFLTGAGTHPGGSISGMPGRNCARVFLQTKHPITQTLKDARDSIKSTVGSV
FGINQ

Sequences:

>Translated_565_residues
MQEYDVVMIGAGHNGLVCAAYLLKAGYSVLLLEKRSVPGGAATTEECLPKEAPGFKFNLCAIDHEFIHLGPVVEELELGK
YGLEYLECDPVVFCPHPDGKYFLAHKSLEKTCAEIARYSERDAKKYAEFTEYWQRAIGAMIPMFNAPPKSIIDIVGNYDI
TKFKDLFSVIGSPNKTLDFIRNMLTSAEDILNEWFDSEFLKAPLARLASELGAPPSQKTIAIGAIMMAMRHNPGMARPRG
GTGALIKALVNLVISKGGVILTDQQVEKVLIDDGKAVGVRVSGGTEYRAKYGVISNIDAKRLFLQMTDKSDVDAADPDLW
ERLERRIVNNNETILKIDLALDEPLRFPFHAHKDEYLVGSILIADSVAHVEQAHSKCTLGEIPDSDPSMYVVMPSYLDPT
LAPSGKHTVWIEFFAPYQIAGAEGTGFKGTGWTDELKNQVADKVVDKLATYAPNVKTATIARRVESPAELGERLGAYKGN
YYHIDMTLDQMVFFRPLPEIANYKTPIDNLFLTGAGTHPGGSISGMPGRNCARVFLQTKHPITQTLKDARDSIKSTVGSV
FGINQ
>Mature_565_residues
MQEYDVVMIGAGHNGLVCAAYLLKAGYSVLLLEKRSVPGGAATTEECLPKEAPGFKFNLCAIDHEFIHLGPVVEELELGK
YGLEYLECDPVVFCPHPDGKYFLAHKSLEKTCAEIARYSERDAKKYAEFTEYWQRAIGAMIPMFNAPPKSIIDIVGNYDI
TKFKDLFSVIGSPNKTLDFIRNMLTSAEDILNEWFDSEFLKAPLARLASELGAPPSQKTIAIGAIMMAMRHNPGMARPRG
GTGALIKALVNLVISKGGVILTDQQVEKVLIDDGKAVGVRVSGGTEYRAKYGVISNIDAKRLFLQMTDKSDVDAADPDLW
ERLERRIVNNNETILKIDLALDEPLRFPFHAHKDEYLVGSILIADSVAHVEQAHSKCTLGEIPDSDPSMYVVMPSYLDPT
LAPSGKHTVWIEFFAPYQIAGAEGTGFKGTGWTDELKNQVADKVVDKLATYAPNVKTATIARRVESPAELGERLGAYKGN
YYHIDMTLDQMVFFRPLPEIANYKTPIDNLFLTGAGTHPGGSISGMPGRNCARVFLQTKHPITQTLKDARDSIKSTVGSV
FGINQ

Specific function: Unknown

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI229577391, Length=566, Percent_Identity=31.095406360424, Blast_Score=234, Evalue=1e-61,
Organism=Caenorhabditis elegans, GI17540238, Length=551, Percent_Identity=29.94555353902, Blast_Score=216, Evalue=4e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62169; Mature: 62169

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEYDVVMIGAGHNGLVCAAYLLKAGYSVLLLEKRSVPGGAATTEECLPKEAPGFKFNLC
CCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHCCCCCCCCEEEEE
AIDHEFIHLGPVVEELELGKYGLEYLECDPVVFCPHPDGKYFLAHKSLEKTCAEIARYSE
EECCCHHHHCHHHHHHHCCHHCCCEEECCCEEECCCCCCCEEEEHHHHHHHHHHHHHHHH
RDAKKYAEFTEYWQRAIGAMIPMFNAPPKSIIDIVGNYDITKFKDLFSVIGSPNKTLDFI
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHH
RNMLTSAEDILNEWFDSEFLKAPLARLASELGAPPSQKTIAIGAIMMAMRHNPGMARPRG
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
GTGALIKALVNLVISKGGVILTDQQVEKVLIDDGKAVGVRVSGGTEYRAKYGVISNIDAK
CCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCEEEEEECCCCCCCEECCCCCCCCHH
RLFLQMTDKSDVDAADPDLWERLERRIVNNNETILKIDLALDEPLRFPFHAHKDEYLVGS
EEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEHH
ILIADSVAHVEQAHSKCTLGEIPDSDPSMYVVMPSYLDPTLAPSGKHTVWIEFFAPYQIA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCEEEE
GAEGTGFKGTGWTDELKNQVADKVVDKLATYAPNVKTATIARRVESPAELGERLGAYKGN
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCCCCCC
YYHIDMTLDQMVFFRPLPEIANYKTPIDNLFLTGAGTHPGGSISGMPGRNCARVFLQTKH
EEEEEEEHHHHHHHCCCHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCC
PITQTLKDARDSIKSTVGSVFGINQ
CHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQEYDVVMIGAGHNGLVCAAYLLKAGYSVLLLEKRSVPGGAATTEECLPKEAPGFKFNLC
CCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHCCCCCCCCEEEEE
AIDHEFIHLGPVVEELELGKYGLEYLECDPVVFCPHPDGKYFLAHKSLEKTCAEIARYSE
EECCCHHHHCHHHHHHHCCHHCCCEEECCCEEECCCCCCCEEEEHHHHHHHHHHHHHHHH
RDAKKYAEFTEYWQRAIGAMIPMFNAPPKSIIDIVGNYDITKFKDLFSVIGSPNKTLDFI
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHH
RNMLTSAEDILNEWFDSEFLKAPLARLASELGAPPSQKTIAIGAIMMAMRHNPGMARPRG
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
GTGALIKALVNLVISKGGVILTDQQVEKVLIDDGKAVGVRVSGGTEYRAKYGVISNIDAK
CCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCEEEEEECCCCCCCEECCCCCCCCHH
RLFLQMTDKSDVDAADPDLWERLERRIVNNNETILKIDLALDEPLRFPFHAHKDEYLVGS
EEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEHH
ILIADSVAHVEQAHSKCTLGEIPDSDPSMYVVMPSYLDPTLAPSGKHTVWIEFFAPYQIA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCEEEE
GAEGTGFKGTGWTDELKNQVADKVVDKLATYAPNVKTATIARRVESPAELGERLGAYKGN
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCCCCCC
YYHIDMTLDQMVFFRPLPEIANYKTPIDNLFLTGAGTHPGGSISGMPGRNCARVFLQTKH
EEEEEEEHHHHHHHCCCHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCC
PITQTLKDARDSIKSTVGSVFGINQ
CHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3453116 [H]