| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231235
Identifier: 17231235
GI number: 17231235
Start: 4519587
End: 4519949
Strand: Reverse
Name: 17231235
Synonym: all3743
Alternate gene names: NA
Gene position: 4519949-4519587 (Counterclockwise)
Preceding gene: 17231236
Following gene: 17231233
Centisome position: 70.47
GC content: 42.15
Gene sequence:
>363_bases ATGCCAAAAACAAAGCCATCCCAGGCTGATCCGTCTGTTCTTGTGGCGGTTGCTGACTATTTTAAGGTACTATCGGAGTC CAGTCGATTACAGATATTGTCTTGTCTCAAGTCAGGGCCAATGAATGTGATGGAAATTGCAGAGGCGACTGGCTTAGGAC AGGCAAATTTGTCTAAGCATTTAAAAGTGTTAACTCAAGCAGGTCTGGTATCTCGTCAGCCTAAGGGTACCAGTGCTTAT TACGAGATTACTGATCCAATGATATTTGAACTTTGTGAGTTAGTATGCGATCGCATTAGTCAACGTTTACTACAGCAGGC TAAGAGTCTGAAAGCCCTTCAAGAGAAAACACCAATTTTTTAA
Upstream 100 bases:
>100_bases AACGGTTGACGGTTGACTACTGACGACAAACTTTAATCGTATTTAGCTATAATACCAACTAGTTATTAAACGCTTTTTGT GTCGGCAATTAAATCTCACT
Downstream 100 bases:
>100_bases CAATCACATAGTCATCTAAAAATAAAGCACCCTAAAATTAGGGTGCTATCTACTAAGCAGTATACACAGGAGAAACTAAC TAGCGATCGCTGGAGCAGTC
Product: transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator ArsR Family; Transcriptional Regulator; Transcriptional Regulator ArsR Family Protein; Regulatory Protein ArsR; ArsR Family Transcriptional Repressor; Regulatory Proteins ArsR Family Protein; Transcriptional Regulator TrmB; Transcription Regulator ArsR; Bacterial Regulatory Protein ArsR Family
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MPKTKPSQADPSVLVAVADYFKVLSESSRLQILSCLKSGPMNVMEIAEATGLGQANLSKHLKVLTQAGLVSRQPKGTSAY YEITDPMIFELCELVCDRISQRLLQQAKSLKALQEKTPIF
Sequences:
>Translated_120_residues MPKTKPSQADPSVLVAVADYFKVLSESSRLQILSCLKSGPMNVMEIAEATGLGQANLSKHLKVLTQAGLVSRQPKGTSAY YEITDPMIFELCELVCDRISQRLLQQAKSLKALQEKTPIF >Mature_119_residues PKTKPSQADPSVLVAVADYFKVLSESSRLQILSCLKSGPMNVMEIAEATGLGQANLSKHLKVLTQAGLVSRQPKGTSAYY EITDPMIFELCELVCDRISQRLLQQAKSLKALQEKTPIF
Specific function: Unknown
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13183; Mature: 13051
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKTKPSQADPSVLVAVADYFKVLSESSRLQILSCLKSGPMNVMEIAEATGLGQANLSKH CCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHH LKVLTQAGLVSRQPKGTSAYYEITDPMIFELCELVCDRISQRLLQQAKSLKALQEKTPIF HHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PKTKPSQADPSVLVAVADYFKVLSESSRLQILSCLKSGPMNVMEIAEATGLGQANLSKH CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHH LKVLTQAGLVSRQPKGTSAYYEITDPMIFELCELVCDRISQRLLQQAKSLKALQEKTPIF HHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA