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The map label for this gene is pcyA [H]

Identifier: 17231199

GI number: 17231199

Start: 4477202

End: 4477939

Strand: Direct

Name: pcyA [H]

Synonym: alr3707

Alternate gene names: 17231199

Gene position: 4477202-4477939 (Clockwise)

Preceding gene: 17231198

Following gene: 17231200

Centisome position: 69.81

GC content: 46.07

Gene sequence:

>738_bases
ATGTCACTTACTTCCATTCCCTCGCTACGTGAGCAACAACATCCCCTCATTCGCCAACTAGCTGACTGTATTGAAGAAGT
TTGGCATCAGCACCTGGATTTGTCGCCTTACCATTTGCCTGCTGAGTTGGGGTATGTGGAAGGGAGACTAGAGGGTGAGA
AACTGACGATTGAAAACCGTTGCTATCAAACACCCCAGTTTCGGAAGATGCACTTGGAATTAGCCAAGGTAGGAAATATG
CTAGACATCCTGCACTGTGTGATGTTTCCGCGTCCAGAGTATGACCTACCGATGTTTGGCTGTGACTTGGTTGGGGGTAG
AGGTCAAATTAGTGCAGCGATCGCCGACCTTTCTCCTGTACACTTAGACCGCACCCTACCCGAATCCTATAATTCGGCGC
TGACAAGTCTCAATACACTAAATTTCTCTCAACCAAGAGAATTGCCAGAATGGGGAAATATCTTCTCCGATTTTTGCATT
TTTGTGCGTCCGAGTTCACCAGAAGAAGAGGCGATGTTTTTGGGACGGGTGCGGGAGTTTTTGCAAGTTCATTGTCAAGG
TGCGATCGCTGCTAGTCCCGTTTCAGCAGAACAAAAACAGCAAATTTTAGCTGGACAACACAATTACTGTAGCAAACAGC
AACAAAACGATAAAACTCGCCGGGTGCTAGAAAAAGCTTTTGGTGTGGATTGGGCAGAAAATTACATGACCACAGTGTTA
TTTGATCTCCCAGAATAA

Upstream 100 bases:

>100_bases
TTCTCCCCAATCCCCAATCCCCTAACTTATGTTGCAATCTAGAACAGAAGTAACGCTCCTGGCAGTAGACTGACATCTAG
ATTGCATTCCCGAATAGAAT

Downstream 100 bases:

>100_bases
CGGTCGTTTGTGGAGATTGGGTGTAGTGGTGTAGGGGTTAGTGAAATGAGGATTCTCTTGTTAGCCTGAGAGTCATGACT
CACTGCTTGGTAAAAAACTA

Product: phycocyanobilin:ferredoxin oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MSLTSIPSLREQQHPLIRQLADCIEEVWHQHLDLSPYHLPAELGYVEGRLEGEKLTIENRCYQTPQFRKMHLELAKVGNM
LDILHCVMFPRPEYDLPMFGCDLVGGRGQISAAIADLSPVHLDRTLPESYNSALTSLNTLNFSQPRELPEWGNIFSDFCI
FVRPSSPEEEAMFLGRVREFLQVHCQGAIAASPVSAEQKQQILAGQHNYCSKQQQNDKTRRVLEKAFGVDWAENYMTTVL
FDLPE

Sequences:

>Translated_245_residues
MSLTSIPSLREQQHPLIRQLADCIEEVWHQHLDLSPYHLPAELGYVEGRLEGEKLTIENRCYQTPQFRKMHLELAKVGNM
LDILHCVMFPRPEYDLPMFGCDLVGGRGQISAAIADLSPVHLDRTLPESYNSALTSLNTLNFSQPRELPEWGNIFSDFCI
FVRPSSPEEEAMFLGRVREFLQVHCQGAIAASPVSAEQKQQILAGQHNYCSKQQQNDKTRRVLEKAFGVDWAENYMTTVL
FDLPE
>Mature_244_residues
SLTSIPSLREQQHPLIRQLADCIEEVWHQHLDLSPYHLPAELGYVEGRLEGEKLTIENRCYQTPQFRKMHLELAKVGNML
DILHCVMFPRPEYDLPMFGCDLVGGRGQISAAIADLSPVHLDRTLPESYNSALTSLNTLNFSQPRELPEWGNIFSDFCIF
VRPSSPEEEAMFLGRVREFLQVHCQGAIAASPVSAEQKQQILAGQHNYCSKQQQNDKTRRVLEKAFGVDWAENYMTTVLF
DLPE

Specific function: Catalyzes the four-electron reduction of biliverdin IX- alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HY2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009249
- InterPro:   IPR022870 [H]

Pfam domain/function: PF05996 Fe_bilin_red [H]

EC number: =1.3.7.5 [H]

Molecular weight: Translated: 27959; Mature: 27828

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTSIPSLREQQHPLIRQLADCIEEVWHQHLDLSPYHLPAELGYVEGRLEGEKLTIENR
CCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCHHHCEECCCEEEECCH
CYQTPQFRKMHLELAKVGNMLDILHCVMFPRPEYDLPMFGCDLVGGRGQISAAIADLSPV
HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCHHHHHHHCCCHH
HLDRTLPESYNSALTSLNTLNFSQPRELPEWGNIFSDFCIFVRPSSPEEEAMFLGRVREF
HHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHEEEECCCCCHHHHHHHHHHHHH
LQVHCQGAIAASPVSAEQKQQILAGQHNYCSKQQQNDKTRRVLEKAFGVDWAENYMTTVL
HHHHHCCCHHCCCCCHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHE
FDLPE
EECCC
>Mature Secondary Structure 
SLTSIPSLREQQHPLIRQLADCIEEVWHQHLDLSPYHLPAELGYVEGRLEGEKLTIENR
CCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCHHHCEECCCEEEECCH
CYQTPQFRKMHLELAKVGNMLDILHCVMFPRPEYDLPMFGCDLVGGRGQISAAIADLSPV
HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCHHHHHHHCCCHH
HLDRTLPESYNSALTSLNTLNFSQPRELPEWGNIFSDFCIFVRPSSPEEEAMFLGRVREF
HHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHEEEECCCCCHHHHHHHHHHHHH
LQVHCQGAIAASPVSAEQKQQILAGQHNYCSKQQQNDKTRRVLEKAFGVDWAENYMTTVL
HHHHHCCCHHCCCCCHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHE
FDLPE
EECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA