| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231188
Identifier: 17231188
GI number: 17231188
Start: 4462934
End: 4464073
Strand: Reverse
Name: 17231188
Synonym: all3696
Alternate gene names: NA
Gene position: 4464073-4462934 (Counterclockwise)
Preceding gene: 17231189
Following gene: 17231187
Centisome position: 69.6
GC content: 42.19
Gene sequence:
>1140_bases GTGTTACCTGGAGCGATCGCACTCGATAATCAAGGCAGACTGTTAGTAGCAGAAAATGGGACACTCCAGCAAGTCTTGAT TTATAAAATTCAGGATCAACCAGTCCAAGTTGGCACTTTTGGCCACACAGGGGGGATTTATGGAGGCGTTCCTGGTGAAG TCCAAGATTTAAAGTTTTATGGACTAACAGGAGTCGGCGCAGATGCTCAGGGGAATCTGTATATCAATAACAATGGGTTC AATAATTCCGGCACAGATTTAAGAAAATTTTCGCCATCAGGAAAACAACTATGGCGATTATTAGGATTATCCTTAGTCGA AAATGCTGACGCTGACCCTAAAACGGATGGAAGAGAAGTTTTTACCAAGTATGAACAATTTTTGATAGATAGTAGCAAGC CTAAGGGTCAGCAATTGATTTATAAAGCTTACACCTTAAACGGCTTCAAATATCCTCAAGATTCACGACTGCATATATCG CCCGATACTACCTTTGTACGTCGGATTAACGATGAAAGATTTTTGTTTCTTTTAGATCCGTACAGCAACGCCTTAGAGAT TTATCGATTTAATCCTAGCAAAGATGGCAACATAGCTATTCCAGCAGGAATGTTTGTTGGTAAAAATATCAGAGGTAAAT CAGCAATCTCAGGAACTTGGCCACCTGAGCAACCAGAAACAGGAAAATGGATTTGGCGCGATCGCAACGGTGACGGCGCT TTCGACAAAGAAGAATATGATCGTAGTGAAGATTCTTCCTCTGTTACAGGATGGTGGGTGGATAGTAAAGGCGATGTGTG GACAACTCTGGGCGATCGAAGAGGTATACGCCATTATCCTTTGCAAGGACTAGATACCAATGGTAATCCCATCTACACTT ACAATTCCATACAACAGGAAAAAACTCCCCTCATCTTTACCGATTTACGGCGAATCAAATACTTTCCTGAAAGTGACACC ATGTATTTGTCCGGCTTTACAGCAAAAAATCCACCCTTTGCTGAAGATCCTCAAGCTCCAGGTTCCGAGATCGCTTGTTT TGACAACTGGAGTAAAGATAATCGTATTCTCCGTTGGCGAATTGTGGTTCCCAAGGACACCATCCGTAAGCGTGAAATGA TTACTGCATCTACGCATTAA
Upstream 100 bases:
>100_bases AATTTGTGGATTATTCAAAAGCAAGATGCAAATAACCCTGCTAAAATTTTGCGTTATTCTTCATCAGGGAAACAATTACC GCAAAAAAATAACTAATGTT
Downstream 100 bases:
>100_bases GTTCTTCTTAAATAAGGATGATTTAGGGGGAGCTAAAACTTTTGGCTACCAACAAACAGAATACTTGTAGTCAATCCACA ACAAGGCGATAATTGACCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NHL Repeat-Containing Protein
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MLPGAIALDNQGRLLVAENGTLQQVLIYKIQDQPVQVGTFGHTGGIYGGVPGEVQDLKFYGLTGVGADAQGNLYINNNGF NNSGTDLRKFSPSGKQLWRLLGLSLVENADADPKTDGREVFTKYEQFLIDSSKPKGQQLIYKAYTLNGFKYPQDSRLHIS PDTTFVRRINDERFLFLLDPYSNALEIYRFNPSKDGNIAIPAGMFVGKNIRGKSAISGTWPPEQPETGKWIWRDRNGDGA FDKEEYDRSEDSSSVTGWWVDSKGDVWTTLGDRRGIRHYPLQGLDTNGNPIYTYNSIQQEKTPLIFTDLRRIKYFPESDT MYLSGFTAKNPPFAEDPQAPGSEIACFDNWSKDNRILRWRIVVPKDTIRKREMITASTH
Sequences:
>Translated_379_residues MLPGAIALDNQGRLLVAENGTLQQVLIYKIQDQPVQVGTFGHTGGIYGGVPGEVQDLKFYGLTGVGADAQGNLYINNNGF NNSGTDLRKFSPSGKQLWRLLGLSLVENADADPKTDGREVFTKYEQFLIDSSKPKGQQLIYKAYTLNGFKYPQDSRLHIS PDTTFVRRINDERFLFLLDPYSNALEIYRFNPSKDGNIAIPAGMFVGKNIRGKSAISGTWPPEQPETGKWIWRDRNGDGA FDKEEYDRSEDSSSVTGWWVDSKGDVWTTLGDRRGIRHYPLQGLDTNGNPIYTYNSIQQEKTPLIFTDLRRIKYFPESDT MYLSGFTAKNPPFAEDPQAPGSEIACFDNWSKDNRILRWRIVVPKDTIRKREMITASTH >Mature_379_residues MLPGAIALDNQGRLLVAENGTLQQVLIYKIQDQPVQVGTFGHTGGIYGGVPGEVQDLKFYGLTGVGADAQGNLYINNNGF NNSGTDLRKFSPSGKQLWRLLGLSLVENADADPKTDGREVFTKYEQFLIDSSKPKGQQLIYKAYTLNGFKYPQDSRLHIS PDTTFVRRINDERFLFLLDPYSNALEIYRFNPSKDGNIAIPAGMFVGKNIRGKSAISGTWPPEQPETGKWIWRDRNGDGA FDKEEYDRSEDSSSVTGWWVDSKGDVWTTLGDRRGIRHYPLQGLDTNGNPIYTYNSIQQEKTPLIFTDLRRIKYFPESDT MYLSGFTAKNPPFAEDPQAPGSEIACFDNWSKDNRILRWRIVVPKDTIRKREMITASTH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42755; Mature: 42755
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPGAIALDNQGRLLVAENGTLQQVLIYKIQDQPVQVGTFGHTGGIYGGVPGEVQDLKFY CCCCEEEECCCCCEEEECCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEE GLTGVGADAQGNLYINNNGFNNSGTDLRKFSPSGKQLWRLLGLSLVENADADPKTDGREV EEEECCCCCCCCEEEECCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHH FTKYEQFLIDSSKPKGQQLIYKAYTLNGFKYPQDSRLHISPDTTFVRRINDERFLFLLDP HHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCEEEECCCCEEEEECCCCEEEEEECC YSNALEIYRFNPSKDGNIAIPAGMFVGKNIRGKSAISGTWPPEQPETGKWIWRDRNGDGA CCCEEEEEEECCCCCCCEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC FDKEEYDRSEDSSSVTGWWVDSKGDVWTTLGDRRGIRHYPLQGLDTNGNPIYTYNSIQQE CCHHHHCCCCCCCCEEEEEECCCCCEEEECCCCCCCEECCCCCCCCCCCEEEEECCCCCC KTPLIFTDLRRIKYFPESDTMYLSGFTAKNPPFAEDPQAPGSEIACFDNWSKDNRILRWR CCCEEEEEHHHHEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEE IVVPKDTIRKREMITASTH EECCHHHHHHHHEEEECCC >Mature Secondary Structure MLPGAIALDNQGRLLVAENGTLQQVLIYKIQDQPVQVGTFGHTGGIYGGVPGEVQDLKFY CCCCEEEECCCCCEEEECCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEE GLTGVGADAQGNLYINNNGFNNSGTDLRKFSPSGKQLWRLLGLSLVENADADPKTDGREV EEEECCCCCCCCEEEECCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHH FTKYEQFLIDSSKPKGQQLIYKAYTLNGFKYPQDSRLHISPDTTFVRRINDERFLFLLDP HHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCEEEECCCCEEEEECCCCEEEEEECC YSNALEIYRFNPSKDGNIAIPAGMFVGKNIRGKSAISGTWPPEQPETGKWIWRDRNGDGA CCCEEEEEEECCCCCCCEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC FDKEEYDRSEDSSSVTGWWVDSKGDVWTTLGDRRGIRHYPLQGLDTNGNPIYTYNSIQQE CCHHHHCCCCCCCCEEEEEECCCCCEEEECCCCCCCEECCCCCCCCCCCEEEEECCCCCC KTPLIFTDLRRIKYFPESDTMYLSGFTAKNPPFAEDPQAPGSEIACFDNWSKDNRILRWR CCCEEEEEHHHHEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEE IVVPKDTIRKREMITASTH EECCHHHHHHHHEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA