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The map label for this gene is ureD [H]

Identifier: 17231158

GI number: 17231158

Start: 4422800

End: 4423639

Strand: Direct

Name: ureD [H]

Synonym: alr3666

Alternate gene names: 17231158

Gene position: 4422800-4423639 (Clockwise)

Preceding gene: 17231155

Following gene: 17231159

Centisome position: 68.96

GC content: 45.12

Gene sequence:

>840_bases
ATGAGCGAAACTGACACTATAGTAAAAGGCTGGCATGGCAAACTTAATTTAGTCTACGCCGATCGCTCAAATTCCACCCA
GTTAATTTACAACCACCAGCAAGCACCGCTAAAGGTACAGCGTCCGTTTTATCCAGAAGGGGAAAAAGTCTGTCATAGTG
TGATCTTACATACGGCCGGGGGTGTGGTGGGAGGCGATCGCCTATCTTATAATCTCCATCTCCAACCGAACGCACAAGCT
TTAATTACCACAGCCGCCGCCGGGAAGGTATATCGCAGCGACGGCTTACAAGCTAGACAAACCATCGAGATAAAAATTGA
TGCAGGTGCTTGTTTAGAATGGCTACCGCAGGAAACAATTTTATTTAATGGGGCAATTTATCGCCAAGATTTACGGGTAG
AATTAGCCACTGGAGCCAATTTCTTAGGCTGGGAAATTACCCGATTTGGTCGTAGTGCTAGAGGAGAGAAATTCTACCAA
GGAGAATGGCGATCGCATACAGAAATTTGGCAACAAGGTGTTCCTTTGTGGATTGATCGTCAATGGCTACCGGGAAATGA
CGCCGTTTTCCACAGTCCTCATGGTTTGGCTGGACAACCAATAGTAGGTAGTCTAGTTTGGTTGGGTAGTCCCATTTCCA
CAGAAATCATCGAAAAAGCGCGCAATTTAGGGAATACTCAAGGTGAAGCAGGCGTTACTTCCTTAGAAAATGGATTTTTA
TGTAGATATCGTGGTGCTTCCACGTCTGAAGTGAGAAACTGGTTTACGTCTGTTTGGCAATTGTTGCGAGGTGAGTTTTT
CAGTCGTGGTAAATGTATACCCAGAGTGTGGCAAACTTAA

Upstream 100 bases:

>100_bases
ATCCACATTCTGCTGATAAGCTAAATATCCATGCCATTTCTGTAGCCTCCTATTGTTATATTTCTAAATATTATTGATTA
CTAATTTTGCAGAAACTTAA

Downstream 100 bases:

>100_bases
TTCGTAATTTGTAATTCCTAATTAATTATGCAGCTTACGCCACAAGAGAAAGATAAATTATTGATTTTTACAGCCGCTTT
AGTAGCAGAGAGGCGCAAAA

Product: urease accessory protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MSETDTIVKGWHGKLNLVYADRSNSTQLIYNHQQAPLKVQRPFYPEGEKVCHSVILHTAGGVVGGDRLSYNLHLQPNAQA
LITTAAAGKVYRSDGLQARQTIEIKIDAGACLEWLPQETILFNGAIYRQDLRVELATGANFLGWEITRFGRSARGEKFYQ
GEWRSHTEIWQQGVPLWIDRQWLPGNDAVFHSPHGLAGQPIVGSLVWLGSPISTEIIEKARNLGNTQGEAGVTSLENGFL
CRYRGASTSEVRNWFTSVWQLLRGEFFSRGKCIPRVWQT

Sequences:

>Translated_279_residues
MSETDTIVKGWHGKLNLVYADRSNSTQLIYNHQQAPLKVQRPFYPEGEKVCHSVILHTAGGVVGGDRLSYNLHLQPNAQA
LITTAAAGKVYRSDGLQARQTIEIKIDAGACLEWLPQETILFNGAIYRQDLRVELATGANFLGWEITRFGRSARGEKFYQ
GEWRSHTEIWQQGVPLWIDRQWLPGNDAVFHSPHGLAGQPIVGSLVWLGSPISTEIIEKARNLGNTQGEAGVTSLENGFL
CRYRGASTSEVRNWFTSVWQLLRGEFFSRGKCIPRVWQT
>Mature_278_residues
SETDTIVKGWHGKLNLVYADRSNSTQLIYNHQQAPLKVQRPFYPEGEKVCHSVILHTAGGVVGGDRLSYNLHLQPNAQAL
ITTAAAGKVYRSDGLQARQTIEIKIDAGACLEWLPQETILFNGAIYRQDLRVELATGANFLGWEITRFGRSARGEKFYQG
EWRSHTEIWQQGVPLWIDRQWLPGNDAVFHSPHGLAGQPIVGSLVWLGSPISTEIIEKARNLGNTQGEAGVTSLENGFLC
RYRGASTSEVRNWFTSVWQLLRGEFFSRGKCIPRVWQT

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0829

COG function: function code O; Urease accessory protein UreH

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002669 [H]

Pfam domain/function: PF01774 UreD [H]

EC number: NA

Molecular weight: Translated: 31292; Mature: 31161

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETDTIVKGWHGKLNLVYADRSNSTQLIYNHQQAPLKVQRPFYPEGEKVCHSVILHTAG
CCCCCCEEECCCCEEEEEEECCCCCEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHCC
GVVGGDRLSYNLHLQPNAQALITTAAAGKVYRSDGLQARQTIEIKIDAGACLEWLPQETI
CEECCCEEEEEEEECCCCCEEEEEHHCCCEECCCCCCEEEEEEEEECCCHHHHHCCCCEE
LFNGAIYRQDLRVELATGANFLGWEITRFGRSARGEKFYQGEWRSHTEIWQQGVPLWIDR
EECCEEEECCCEEEEECCCCCCCCHHHHHCCCCCCCCEECCCCCCHHHHHHCCCCEEEEC
QWLPGNDAVFHSPHGLAGQPIVGSLVWLGSPISTEIIEKARNLGNTQGEAGVTSLENGFL
EECCCCCCEEECCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCEE
CRYRGASTSEVRNWFTSVWQLLRGEFFSRGKCIPRVWQT
EEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCC
>Mature Secondary Structure 
SETDTIVKGWHGKLNLVYADRSNSTQLIYNHQQAPLKVQRPFYPEGEKVCHSVILHTAG
CCCCCEEECCCCEEEEEEECCCCCEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHCC
GVVGGDRLSYNLHLQPNAQALITTAAAGKVYRSDGLQARQTIEIKIDAGACLEWLPQETI
CEECCCEEEEEEEECCCCCEEEEEHHCCCEECCCCCCEEEEEEEEECCCHHHHHCCCCEE
LFNGAIYRQDLRVELATGANFLGWEITRFGRSARGEKFYQGEWRSHTEIWQQGVPLWIDR
EECCEEEECCCEEEEECCCCCCCCHHHHHCCCCCCCCEECCCCCCHHHHHHCCCCEEEEC
QWLPGNDAVFHSPHGLAGQPIVGSLVWLGSPISTEIIEKARNLGNTQGEAGVTSLENGFL
EECCCCCCEEECCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCEE
CRYRGASTSEVRNWFTSVWQLLRGEFFSRGKCIPRVWQT
EEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA