| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is groES [H]
Identifier: 17231153
GI number: 17231153
Start: 4418762
End: 4419073
Strand: Direct
Name: groES [H]
Synonym: alr3661
Alternate gene names: 17231153
Gene position: 4418762-4419073 (Clockwise)
Preceding gene: 17231151
Following gene: 17231154
Centisome position: 68.89
GC content: 48.08
Gene sequence:
>312_bases ATGGCAGCAGTATCTCTAAGCGTATCCACCGTTAAACCTTTAGGCGATCGCGTTTTCGTAAAAGTGAGCGCCTCTGAAGA AAAGACCGCAGGTGGTTTGTATTTGCCCGACACCGCTAAGGAAAAACCCCAAGTAGGTGAAGTAGTTGCTCTTGGAGCAG GCAAACGGAATGACGACGGTAGCCGTCAAGAATTGGAAGTAAAAGTTGGCGATAAAGTGCTGTACTCCAAGTACGCTGGC ACCGATGTCAAGCTGGGAACCGAAGAATACGTCCTACTGTCTGAAAAAGACATTCTAGCAGTCGTTGGCTAA
Upstream 100 bases:
>100_bases GTTCGGAAACCCGTACACAGGTAAATATTGCCATTGGGGGCTATTCTTCGGTAGATTAGCACTCAGGAGTTGAGAGTGCT AACTCTGGAGAAATTAAAGT
Downstream 100 bases:
>100_bases TGGGTAATAAGTAATAGGTAATCGCAATACCTATTTACTGATGATCAAATTTCACGACACAAAACTTGATTTAACTTCCT GAGATTTAGACACCTATGGC
Product: co-chaperonin GroES
Products: NA
Alternate protein names: GroES protein; Protein Cpn10 [H]
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MAAVSLSVSTVKPLGDRVFVKVSASEEKTAGGLYLPDTAKEKPQVGEVVALGAGKRNDDGSRQELEVKVGDKVLYSKYAG TDVKLGTEEYVLLSEKDILAVVG
Sequences:
>Translated_103_residues MAAVSLSVSTVKPLGDRVFVKVSASEEKTAGGLYLPDTAKEKPQVGEVVALGAGKRNDDGSRQELEVKVGDKVLYSKYAG TDVKLGTEEYVLLSEKDILAVVG >Mature_102_residues AAVSLSVSTVKPLGDRVFVKVSASEEKTAGGLYLPDTAKEKPQVGEVVALGAGKRNDDGSRQELEVKVGDKVLYSKYAGT DVKLGTEEYVLLSEKDILAVVG
Specific function: Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter [H]
COG id: COG0234
COG function: function code O; Co-chaperonin GroES (HSP10)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GroES chaperonin family [H]
Homologues:
Organism=Escherichia coli, GI1790585, Length=94, Percent_Identity=42.5531914893617, Blast_Score=70, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17555568, Length=94, Percent_Identity=44.6808510638298, Blast_Score=73, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6324594, Length=101, Percent_Identity=40.5940594059406, Blast_Score=74, Evalue=4e-15, Organism=Drosophila melanogaster, GI21358317, Length=95, Percent_Identity=42.1052631578947, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: 980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 1274 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020818 - InterPro: IPR018369 - InterPro: IPR011032 [H]
Pfam domain/function: PF00166 Cpn10 [H]
EC number: NA
Molecular weight: Translated: 10870; Mature: 10739
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS00681 CHAPERONINS_CPN10
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAVSLSVSTVKPLGDRVFVKVSASEEKTAGGLYLPDTAKEKPQVGEVVALGAGKRNDDG CCEEEEEEEECCCCCCEEEEEEECCCCCCCCCEECCCCCCCCCCCCCEEEECCCCCCCCC SRQELEVKVGDKVLYSKYAGTDVKLGTEEYVLLSEKDILAVVG CCEEEEEEECCEEEEEECCCCEEEECCCEEEEEECCCEEEEEC >Mature Secondary Structure AAVSLSVSTVKPLGDRVFVKVSASEEKTAGGLYLPDTAKEKPQVGEVVALGAGKRNDDG CEEEEEEEECCCCCCEEEEEEECCCCCCCCCEECCCCCCCCCCCCCEEEECCCCCCCCC SRQELEVKVGDKVLYSKYAGTDVKLGTEEYVLLSEKDILAVVG CCEEEEEEECCEEEEEECCCCEEEECCCEEEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA