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The map label for this gene is 17231140

Identifier: 17231140

GI number: 17231140

Start: 4401511

End: 4402677

Strand: Direct

Name: 17231140

Synonym: alr3648

Alternate gene names: NA

Gene position: 4401511-4402677 (Clockwise)

Preceding gene: 17231139

Following gene: 17231141

Centisome position: 68.63

GC content: 42.07

Gene sequence:

>1167_bases
ATGTTTTCTCAAATTTTTCGCAAAACTCCGCTAGCTTGGCGGCAGTTAATGAAGGAAAAGACTCGGTTAGCGGTTGCAGT
TGCCGGTATTACCTTTGCCGATATGCTGATGTTTATTCAGTTAGGTTTTGAAAGTGCGCTGTTTGATGCGGCTGTGAAAC
CTCACCGCAATTTACAAGCAGATTTGGTGTTAATTAATCCTCAATTCCAAACTTTGTTTTCAGTCAAAAGCTTTTCTAGA
GAAAGGCTATATCAAGCTTTAGGTTATGAGGGTGTGCAGTCAGTAACACCCCTTTATATAGGTACTGGACAGTGGCGTAA
TCCGGAAACTCGTCAGGATAGAGCCATCTTAGTATGGGGTATAGATCCGGCTGCATCTGCTTTTACATTTCCCGAAATCC
GCAAAAATCAAGATCAAATTAAACAGCTAAATCAAGTTTTATTCGATCAAGCTGGCCGCCCAGAATATGGAGCCGTGGGT
GATATCTTCAAAAAAACAAACAGCTTTCAAACAGAACTAAATAATATTGGCGTTAATGTTAGCGGAGTGTTTAGCAACGG
AGCCTCTTTTGCGGCTGATGGTAATGTCATTGCTAGCGATTCCACATTTTTAAGACTATTTCCCGAACGCAAACCAGACC
GCATCGAAGTAGGACTAATCACCCTCAAACCAGGGGTAGATAAAGAAAAAGTGCGATCGCAACTAGCCGCAGGGTTACCC
AATGACGTTATAGTCTTGACTCCAGAAGGGTTTGCTCAAACTGAAAAAGATTACTGGGCAAATGGGACTGGTATTGGTTT
CATTTTTGGGTTAGGTGTGGGAGTAGGGTTTATTGTCGGCATTGTAATTGTTTATCAGATTCTTTACTCTGATGTTTCTG
ATCACTTGCCAGAATATGCCACTCTCAAGGCAATGGGTTATACAGACCGCTATCTCTTATTAGTCCTTCTGCAAGAAGCA
TTGTTATTAGCTTTCCTTGGCTATCTCCCAGCTTATATCTTGTCTTTTGGGCTATATCAAGTTACTTACGCAGCAACTAT
GTTGCCCATAGCTATGAAACTAGAACGGGCAATCACTGTATTTATTCTCACCATTATCATGTGTACCGCTTCCGGTGCGA
TCGCTATGCGAAAACTTCGTTCTGCTGATCCTGCCGATGTGTTTTAG

Upstream 100 bases:

>100_bases
AAGTTTCACAAACTTGCAAGTGCAAGCAGCAATTGAAACAATTCAAAATTCCAAATGAAAGAATTTTCAGAAAACTATTG
ACTAACGACTAAATAATATT

Downstream 100 bases:

>100_bases
TTATTGGTCAGTTGTCAGTTGTCAGTTGACATTAGTTTTTCCCATACTCGCTGTCTTCTACTCCTTATTTCCTTAAAAAA
ACAATGTTACAAGAATTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: ABC-Transporter Membrane Spanning Component; ABC Transporter Permease; ABC Transporter Permease Protein; Efflux ABC Transporter Permease Protein; Glycolipid ABC Exporter Family Permease Protein; Glycolipid ABC Exporter Inner Membrane Subunit; DevC-Like ABC Transporter Permease Protein; Membrane Permease Or ABC Transporter Component; DevC-Like ABC Transporter Permease Component; Exporter Subunit DevC- ABC Transporter Family Protein; ABC-Transporter DevC-Like-Protein; ABC Transporter Transmembrane Protein; Permease Protein DevC-Like Protein; ABC Efflux Pump Inner Membrane Subunit; DevC-Like ABC Transporter Permease; ABC Transporter Permease Component; ABC-Transporter DevC Family Protein; ABC Transporter Membrane Spanning Subunit DevC-Like

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MFSQIFRKTPLAWRQLMKEKTRLAVAVAGITFADMLMFIQLGFESALFDAAVKPHRNLQADLVLINPQFQTLFSVKSFSR
ERLYQALGYEGVQSVTPLYIGTGQWRNPETRQDRAILVWGIDPAASAFTFPEIRKNQDQIKQLNQVLFDQAGRPEYGAVG
DIFKKTNSFQTELNNIGVNVSGVFSNGASFAADGNVIASDSTFLRLFPERKPDRIEVGLITLKPGVDKEKVRSQLAAGLP
NDVIVLTPEGFAQTEKDYWANGTGIGFIFGLGVGVGFIVGIVIVYQILYSDVSDHLPEYATLKAMGYTDRYLLLVLLQEA
LLLAFLGYLPAYILSFGLYQVTYAATMLPIAMKLERAITVFILTIIMCTASGAIAMRKLRSADPADVF

Sequences:

>Translated_388_residues
MFSQIFRKTPLAWRQLMKEKTRLAVAVAGITFADMLMFIQLGFESALFDAAVKPHRNLQADLVLINPQFQTLFSVKSFSR
ERLYQALGYEGVQSVTPLYIGTGQWRNPETRQDRAILVWGIDPAASAFTFPEIRKNQDQIKQLNQVLFDQAGRPEYGAVG
DIFKKTNSFQTELNNIGVNVSGVFSNGASFAADGNVIASDSTFLRLFPERKPDRIEVGLITLKPGVDKEKVRSQLAAGLP
NDVIVLTPEGFAQTEKDYWANGTGIGFIFGLGVGVGFIVGIVIVYQILYSDVSDHLPEYATLKAMGYTDRYLLLVLLQEA
LLLAFLGYLPAYILSFGLYQVTYAATMLPIAMKLERAITVFILTIIMCTASGAIAMRKLRSADPADVF
>Mature_388_residues
MFSQIFRKTPLAWRQLMKEKTRLAVAVAGITFADMLMFIQLGFESALFDAAVKPHRNLQADLVLINPQFQTLFSVKSFSR
ERLYQALGYEGVQSVTPLYIGTGQWRNPETRQDRAILVWGIDPAASAFTFPEIRKNQDQIKQLNQVLFDQAGRPEYGAVG
DIFKKTNSFQTELNNIGVNVSGVFSNGASFAADGNVIASDSTFLRLFPERKPDRIEVGLITLKPGVDKEKVRSQLAAGLP
NDVIVLTPEGFAQTEKDYWANGTGIGFIFGLGVGVGFIVGIVIVYQILYSDVSDHLPEYATLKAMGYTDRYLLLVLLQEA
LLLAFLGYLPAYILSFGLYQVTYAATMLPIAMKLERAITVFILTIIMCTASGAIAMRKLRSADPADVF

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42970; Mature: 42970

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSQIFRKTPLAWRQLMKEKTRLAVAVAGITFADMLMFIQLGFESALFDAAVKPHRNLQA
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DLVLINPQFQTLFSVKSFSRERLYQALGYEGVQSVTPLYIGTGQWRNPETRQDRAILVWG
CEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEECCCCCCCCCCCCCEEEEEC
IDPAASAFTFPEIRKNQDQIKQLNQVLFDQAGRPEYGAVGDIFKKTNSFQTELNNIGVNV
CCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHCCCEE
SGVFSNGASFAADGNVIASDSTFLRLFPERKPDRIEVGLITLKPGVDKEKVRSQLAAGLP
EEEECCCCCCCCCCCEEECCCCEEEECCCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCC
NDVIVLTPEGFAQTEKDYWANGTGIGFIFGLGVGVGFIVGIVIVYQILYSDVSDHLPEYA
CCEEEECCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
TLKAMGYTDRYLLLVLLQEALLLAFLGYLPAYILSFGLYQVTYAATMLPIAMKLERAITV
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FILTIIMCTASGAIAMRKLRSADPADVF
HHHHHHHHHCCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MFSQIFRKTPLAWRQLMKEKTRLAVAVAGITFADMLMFIQLGFESALFDAAVKPHRNLQA
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DLVLINPQFQTLFSVKSFSRERLYQALGYEGVQSVTPLYIGTGQWRNPETRQDRAILVWG
CEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEECCCCCCCCCCCCCEEEEEC
IDPAASAFTFPEIRKNQDQIKQLNQVLFDQAGRPEYGAVGDIFKKTNSFQTELNNIGVNV
CCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHCCCEE
SGVFSNGASFAADGNVIASDSTFLRLFPERKPDRIEVGLITLKPGVDKEKVRSQLAAGLP
EEEECCCCCCCCCCCEEECCCCEEEECCCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCC
NDVIVLTPEGFAQTEKDYWANGTGIGFIFGLGVGVGFIVGIVIVYQILYSDVSDHLPEYA
CCEEEECCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
TLKAMGYTDRYLLLVLLQEALLLAFLGYLPAYILSFGLYQVTYAATMLPIAMKLERAITV
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FILTIIMCTASGAIAMRKLRSADPADVF
HHHHHHHHHCCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA